CX287325
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX287325 vs. ExPASy Swiss-Prot
Match: ARGD_SHIFL (Acetylornithine/succinyldiaminopimelate aminotransferase OS=Shigella flexneri GN=argD PE=3 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 1.366e-12 Identity = 40/121 (33.06%), Postives = 63/121 (52.07%), Query Frame = 2 Query: 5 GRLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFSDS-PIIGEIRGTGLILGTE 364 GR G +F Y + PD+++ AKAL + PI A+L + E++ H S HG TY G+P++CAVA A I ++E + +F D ++ + +IRG GL++G E Sbjct: 233 GRTGDLFAYRYYGVTPDILTSAKALGGGF-PISAMLTTAEIASAFHPGS-------HGSTYGGNPLACAVAGAAFDIINTPEVLEGIQAKRQRFVDHLQKIDQQYDVFSDIRGMGLLIGAE 345
BLAST of CX287325 vs. ExPASy Swiss-Prot
Match: ARGD_ECOLI (Acetylornithine/succinyldiaminopimelate aminotransferase OS=Escherichia coli (strain K12) GN=argD PE=1 SV=4) HSP 1 Score: 71.633 bits (174), Expect = 1.366e-12 Identity = 40/121 (33.06%), Postives = 63/121 (52.07%), Query Frame = 2 Query: 5 GRLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFSDS-PIIGEIRGTGLILGTE 364 GR G +F Y + PD+++ AKAL + PI A+L + E++ H S HG TY G+P++CAVA A I ++E + +F D ++ + +IRG GL++G E Sbjct: 233 GRTGDLFAYMHYGVTPDILTSAKALGGGF-PISAMLTTAEIASAFHPGS-------HGSTYGGNPLACAVAGAAFDIINTPEVLEGIQAKRQRFVDHLQKIDQQYDVFSDIRGMGLLIGAE 345
BLAST of CX287325 vs. ExPASy Swiss-Prot
Match: ARGD_ECO57 (Acetylornithine/succinyldiaminopimelate aminotransferase OS=Escherichia coli O157:H7 GN=argD PE=3 SV=3) HSP 1 Score: 71.633 bits (174), Expect = 1.366e-12 Identity = 40/121 (33.06%), Postives = 63/121 (52.07%), Query Frame = 2 Query: 5 GRLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFSDS-PIIGEIRGTGLILGTE 364 GR G +F Y + PD+++ AKAL + PI A+L + E++ H S HG TY G+P++CAVA A I ++E + +F D ++ + +IRG GL++G E Sbjct: 233 GRTGDLFAYMHYGVTPDILTSAKALGGGF-PISAMLTTAEIASAFHPGS-------HGSTYGGNPLACAVAGAAFDIINTPEVLEGIQAKRQRFVDHLQKIDQQYDVFSDIRGMGLLIGAE 345
BLAST of CX287325 vs. ExPASy Swiss-Prot
Match: AGT2_MOUSE (Alanine--glyoxylate aminotransferase 2, mitochondrial OS=Mus musculus GN=Agxt2 PE=2 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 1.366e-12 Identity = 39/138 (28.26%), Postives = 75/138 (54.35%), Query Frame = 2 Query: 2 FGRLGTMF-GCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKERNIVEQVNKIAP----KFQDGVKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFP 400 FGRLG+ F G + + PD+V+ AK + + + P+ A++ +PE+++ + + H T+ G+P++CA+ L++ +E N+ ++ KF K + I+G++RG GL++G E +K +P P Sbjct: 325 FGRLGSHFWGFQTHDVLPDIVTMAKGIGNGF-PMAAVVTTPEIAKSLAKR------LLHFSTFGGNPLACAIGSAVLEVIEEENLQRNSQEVGTYMLLKF---AKLRDEFDIVGDVRGKGLMVGIEMVQDKISRQPLP 452
BLAST of CX287325 vs. ExPASy Swiss-Prot
Match: OAT_GEOSW (Ornithine aminotransferase OS=Geobacillus sp. (strain WCH70) GN=rocD PE=3 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 2.331e-12 Identity = 40/127 (31.50%), Postives = 64/127 (50.39%), Query Frame = 2 Query: 5 GRLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFSDSPIIGEIRGTGLILGTEFADNKSP 385 GR G MF CD ++ PD+ KAL PI + + ++ V + SHG T+ G+P++CAV+I AL + E + E+ ++ F + ++ P I E+RG GL +G E + P Sbjct: 233 GRSGKMFACDWENVVPDMYILGKALGGGVFPISCVAANRDILGVFNPG-------SHGSTFGGNPLACAVSIAALDVIIEEKLPERSLELGNYFIEKLREI-QHPDIKEVRGRGLFIGVELHTSARP 351
BLAST of CX287325 vs. ExPASy Swiss-Prot
Match: BIOB_BACFR (Biotin synthase OS=Bacteroides fragilis GN=bioB PE=3 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 3.044e-12 Identity = 35/117 (29.91%), Postives = 65/117 (55.56%), Query Frame = 2 Query: 2 FGRLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFSDSPIIGEIRGTGLI 352 FGR G +F + ++PD++ KAL+ YM + A+L + EV++ I ++ G+F HG T+ G+P++CAVA ++++ E V +I + + + P + ++R G I Sbjct: 568 FGRTGKLFAWEHAGVEPDIMCIGKALTGGYMTLSAVLTTNEVADCI--SNHAPGAFMHGPTFMGNPLACAVACASVRLLLTSGWQENVKRIEAQLNRELAPARELPQVADVRVLGAI 682
BLAST of CX287325 vs. ExPASy Swiss-Prot
Match: BIOB_BACFN (Biotin synthase OS=Bacteroides fragilis (strain ATCC 25285 / NCTC 9343) GN=bioB PE=3 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 3.044e-12 Identity = 35/117 (29.91%), Postives = 65/117 (55.56%), Query Frame = 2 Query: 2 FGRLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFSDSPIIGEIRGTGLI 352 FGR G +F + ++PD++ KAL+ YM + A+L + EV++ I ++ G+F HG T+ G+P++CAVA ++++ E V +I + + + P + ++R G I Sbjct: 568 FGRTGKLFAWEHAGVEPDIMCIGKALTGGYMTLSAVLTTNEVADCI--SNHAPGAFMHGPTFMGNPLACAVACASVRLLLTSGWQENVKRIEAQLNRELAPARELPQVADVRVLGAI 682
BLAST of CX287325 vs. ExPASy Swiss-Prot
Match: ARGD_SALTY (Acetylornithine/succinyldiaminopimelate aminotransferase OS=Salmonella typhimurium GN=argD PE=1 SV=3) HSP 1 Score: 70.4774 bits (171), Expect = 3.044e-12 Identity = 39/121 (32.23%), Postives = 65/121 (53.72%), Query Frame = 2 Query: 5 GRLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFSDS-PIIGEIRGTGLILGTE 364 GR G +F Y + PD+++ AKAL + P+ A+L + E++ H S HG TY G+P++CAVA A I +++ ++ +F ++A + I +IRG GL++G E Sbjct: 233 GRTGDLFAYMHYGVTPDILTSAKALGGGF-PVSAMLTTQEIASAFHVGS-------HGSTYGGNPLACAVAGAAFDIINTPEVLQGIHTKRQQFVQHLQAIDEQFDIFSDIRGMGLLIGAE 345
BLAST of CX287325 vs. ExPASy Swiss-Prot
Match: ARGD_SALTI (Acetylornithine/succinyldiaminopimelate aminotransferase OS=Salmonella typhi GN=argD PE=3 SV=3) HSP 1 Score: 70.4774 bits (171), Expect = 3.044e-12 Identity = 39/121 (32.23%), Postives = 65/121 (53.72%), Query Frame = 2 Query: 5 GRLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFSDS-PIIGEIRGTGLILGTE 364 GR G +F Y + PD+++ AKAL + P+ A+L + E++ H S HG TY G+P++CAVA A I +++ ++ +F ++A + I +IRG GL++G E Sbjct: 233 GRTGDLFAYMHYGVTPDILTSAKALGGGF-PVSAMLTTQEIASAFHVGS-------HGSTYGGNPLACAVAGAAFDIINTPEVLQGIHTKRQQFVQHLQAIDEQFDIFSDIRGMGLLIGAE 345
BLAST of CX287325 vs. ExPASy Swiss-Prot
Match: OAT_SCHPO (Probable ornithine aminotransferase OS=Schizosaccharomyces pombe GN=SPBC21C3.08c PE=2 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 3.976e-12 Identity = 40/125 (32.00%), Postives = 69/125 (55.20%), Query Frame = 2 Query: 8 RLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFSDSPIIGEIRGTGLILGTEFADNKS 382 R G M + ++KPD+V KA+S P+ A+L S E+ +++ + T HG TY G+P+ AV+I AL++ KE + E+ + KF+ + SPI+ ++RG GL+ ++K+ Sbjct: 254 RTGKMLCIEHSNVKPDVVILGKAISGGVYPVSAVLSSREI--MLNFEPGT-----HGSTYGGNPLGAAVSIAALEVVKEEKLTERAAVLGEKFRTAL-IECKSPIVQKVRGRGLLNAVVIDESKT 370 The following BLAST results are available for this feature:
BLAST of CX287325 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 145
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Sequences
The
following sequences are available for this feature:
EST sequence >CX287325 ID=CX287325; Name=CX287325; organism=Citrus clementina; type=EST; length=414bpback to top |