CX287367
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX287367 vs. ExPASy Swiss-Prot
Match: RBS_EUGGR (Ribulose bisphosphate carboxylase small chains, chloroplastic OS=Euglena gracilis GN=RBCS1 PE=2 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 8.942e-20 Identity = 38/63 (60.32%), Postives = 50/63 (79.37%), Query Frame = 2 Query: 104 GYYDGRYWTMWKLPMYGCTDATQVLKEVGEVQKEYPHSFVRIIGFDNKRQVQCISFIAAKPPG 292 GYYD RYWTMWKLPM+GCTDA+QVL+E+ E ++ YP +VR+ FD+ +QVQ ISF+ +P G Sbjct: 200 GYYDNRYWTMWKLPMFGCTDASQVLREISECRRAYPQCYVRLAAFDSVKQVQVISFVVQRPSG 262 HSP 2 Score: 95.5153 bits (236), Expect = 8.942e-20 Identity = 38/63 (60.32%), Postives = 50/63 (79.37%), Query Frame = 2 Query: 104 GYYDGRYWTMWKLPMYGCTDATQVLKEVGEVQKEYPHSFVRIIGFDNKRQVQCISFIAAKPPG 292 GYYD RYWTMWKLPM+GCTDA+QVL+E+ E ++ YP +VR+ FD+ +QVQ ISF+ +P G Sbjct: 344 GYYDNRYWTMWKLPMFGCTDASQVLREISECRRAYPQCYVRLAAFDSVKQVQVISFVVQRPSG 406 HSP 3 Score: 95.5153 bits (236), Expect = 8.942e-20 Identity = 38/63 (60.32%), Postives = 50/63 (79.37%), Query Frame = 2 Query: 104 GYYDGRYWTMWKLPMYGCTDATQVLKEVGEVQKEYPHSFVRIIGFDNKRQVQCISFIAAKPPG 292 GYYD RYWTMWKLPM+GCTDA+QVL+E+ E ++ YP +VR+ FD+ +QVQ ISF+ +P G Sbjct: 631 GYYDNRYWTMWKLPMFGCTDASQVLREISECRRAYPQCYVRLAAFDSVKQVQVISFVVQRPSG 693 HSP 4 Score: 95.5153 bits (236), Expect = 8.942e-20 Identity = 38/63 (60.32%), Postives = 50/63 (79.37%), Query Frame = 2 Query: 104 GYYDGRYWTMWKLPMYGCTDATQVLKEVGEVQKEYPHSFVRIIGFDNKRQVQCISFIAAKPPG 292 GYYD RYWTMWKLPM+GCTDA+QVL+E+ E ++ YP +VR+ FD+ +QVQ ISF+ +P G Sbjct: 774 GYYDNRYWTMWKLPMFGCTDASQVLREISECRRAYPQCYVRLAAFDSVKQVQVISFVVQRPSG 836 HSP 5 Score: 95.5153 bits (236), Expect = 8.942e-20 Identity = 38/63 (60.32%), Postives = 50/63 (79.37%), Query Frame = 2 Query: 104 GYYDGRYWTMWKLPMYGCTDATQVLKEVGEVQKEYPHSFVRIIGFDNKRQVQCISFIAAKPPG 292 GYYD RYWTMWKLPM+GCTDA+QVL+E+ E ++ YP +VR+ FD+ +QVQ ISF+ +P G Sbjct: 1062 GYYDNRYWTMWKLPMFGCTDASQVLREISECRRAYPQCYVRLAAFDSVKQVQVISFVVQRPSG 1124 HSP 6 Score: 93.5893 bits (231), Expect = 3.398e-19 Identity = 37/63 (58.73%), Postives = 49/63 (77.78%), Query Frame = 2 Query: 104 GYYDGRYWTMWKLPMYGCTDATQVLKEVGEVQKEYPHSFVRIIGFDNKRQVQCISFIAAKPPG 292 GYYD YWTMWKLPM+GCTDA+QVL+E+ E ++ YP +VR+ FD+ +QVQ ISF+ +P G Sbjct: 487 GYYDNHYWTMWKLPMFGCTDASQVLREISECRRAYPQCYVRLAAFDSVKQVQVISFVVQRPSG 549 HSP 7 Score: 93.5893 bits (231), Expect = 3.398e-19 Identity = 37/61 (60.66%), Postives = 49/61 (80.33%), Query Frame = 2 Query: 104 GYYDGRYWTMWKLPMYGCTDATQVLKEVGEVQKEYPHSFVRIIGFDNKRQVQCISFIAAKP 286 GYYD RYWTMWKLPM+GCTDA+QVL+E+ E ++ YP +VR+ FD+ +QVQ ISF+ +P Sbjct: 1206 GYYDNRYWTMWKLPMFGCTDASQVLREISECRRAYPQCYVRLAAFDSVKQVQVISFVVQRP 1266 HSP 8 Score: 91.2781 bits (225), Expect = 1.686e-18 Identity = 38/63 (60.32%), Postives = 50/63 (79.37%), Query Frame = 2 Query: 104 GYYDGRYWTMWKLPMYGCTDATQVLKEVGEVQKEYPHSFVRIIGFDNKRQVQCISFIAAKPPG 292 GYYD RYWTMWKLPM+GCTDA+QVL+E+ E ++ YP +VR + FD+ +QVQ ISF+ +P G Sbjct: 919 GYYDNRYWTMWKLPMFGCTDASQVLREISECRRAYPQCYVR-LAFDSVKQVQVISFVVQRPSG 980
BLAST of CX287367 vs. ExPASy Swiss-Prot
Match: RBS_CHLMO (Ribulose bisphosphate carboxylase small chain, chloroplastic OS=Chlamydomonas moewusii GN=RBCS PE=2 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 4.438e-19 Identity = 36/63 (57.14%), Postives = 49/63 (77.78%), Query Frame = 2 Query: 98 SPGYYDGRYWTMWKLPMYGCTDATQVLKEVGEVQKEYPHSFVRIIGFDNKRQVQCISFIAAKP 286 S GYYD RYWTMWKLPM+GCTD +QVL+EV Q +P+ ++R++ FDN +QVQC+ F+ +P Sbjct: 92 SAGYYDNRYWTMWKLPMFGCTDPSQVLREVSACQVAFPNVYIRLVAFDNVKQVQCMGFLVQRP 154
BLAST of CX287367 vs. ExPASy Swiss-Prot
Match: RBS2_CHLRE (Ribulose bisphosphate carboxylase small chain 2, chloroplastic OS=Chlamydomonas reinhardtii GN=RBCS-2 PE=1 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 3.517e-16 Identity = 32/60 (53.33%), Postives = 45/60 (75.00%), Query Frame = 2 Query: 107 YYDGRYWTMWKLPMYGCTDATQVLKEVGEVQKEYPHSFVRIIGFDNKRQVQCISFIAAKP 286 YYD RYWTMWKLPM+GC D QVL+E+ K +P ++VR++ FDN++QVQ + F+ +P Sbjct: 112 YYDNRYWTMWKLPMFGCRDPMQVLREIVACTKAFPDAYVRLVAFDNQKQVQIMGFLVQRP 171
BLAST of CX287367 vs. ExPASy Swiss-Prot
Match: RBS1_CHLRE (Ribulose bisphosphate carboxylase small chain 1, chloroplastic OS=Chlamydomonas reinhardtii GN=RBCS-1 PE=1 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 3.517e-16 Identity = 32/60 (53.33%), Postives = 45/60 (75.00%), Query Frame = 2 Query: 107 YYDGRYWTMWKLPMYGCTDATQVLKEVGEVQKEYPHSFVRIIGFDNKRQVQCISFIAAKP 286 YYD RYWTMWKLPM+GC D QVL+E+ K +P ++VR++ FDN++QVQ + F+ +P Sbjct: 112 YYDNRYWTMWKLPMFGCRDPMQVLREIVACTKAFPDAYVRLVAFDNQKQVQIMGFLVQRP 171
BLAST of CX287367 vs. ExPASy Swiss-Prot
Match: RBS3_ACEAT (Ribulose bisphosphate carboxylase small chain 3, chloroplastic OS=Acetabularia acetabulum GN=RBCS-3 PE=2 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 7.834e-16 Identity = 33/61 (54.10%), Postives = 44/61 (72.13%), Query Frame = 2 Query: 107 YYDGRYWTMWKLPMYGCTDATQVLKEVGEVQKEYPHSFVRIIGFDNKRQVQCISFIAAKPP 289 Y D RYWTMWKLPM+GCTDA+QVL E+ K +P +++R++ FD RQVQ F+ +PP Sbjct: 109 YQDNRYWTMWKLPMFGCTDASQVLSEIQACTKAFPDAYIRLVCFDANRQVQISGFLVHRPP 169
BLAST of CX287367 vs. ExPASy Swiss-Prot
Match: RBS3_ACECL (Ribulose bisphosphate carboxylase small chain 3, chloroplastic OS=Acetabularia cliftonii GN=RBCS-3 PE=2 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 1.745e-15 Identity = 33/64 (51.56%), Postives = 44/64 (68.75%), Query Frame = 2 Query: 98 SPGYYDGRYWTMWKLPMYGCTDATQVLKEVGEVQKEYPHSFVRIIGFDNKRQVQCISFIAAKPP 289 S Y D RYWTMWKLPM+GCTD +QVL E+ K +P +++R++ FD RQVQ F+ +PP Sbjct: 107 SSTYQDNRYWTMWKLPMFGCTDGSQVLSEIQACTKAFPDAYIRLVCFDANRQVQISGFLVHRPP 170
BLAST of CX287367 vs. ExPASy Swiss-Prot
Match: RBS2_ACECL (Ribulose bisphosphate carboxylase small chain 2 (Fragment) OS=Acetabularia cliftonii GN=RBCS-2 PE=3 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 1.745e-15 Identity = 33/64 (51.56%), Postives = 44/64 (68.75%), Query Frame = 2 Query: 98 SPGYYDGRYWTMWKLPMYGCTDATQVLKEVGEVQKEYPHSFVRIIGFDNKRQVQCISFIAAKPP 289 S Y D RYWTMWKLPM+GCTD +QVL E+ K +P +++R++ FD RQVQ F+ +PP Sbjct: 10 SSTYQDNRYWTMWKLPMFGCTDGSQVLSEIQACTKAFPDAYIRLVCFDANRQVQISGFLVHRPP 73
BLAST of CX287367 vs. ExPASy Swiss-Prot
Match: RBS5_ACECL (Ribulose bisphosphate carboxylase small chain 5, chloroplastic OS=Acetabularia cliftonii GN=RBCS-5 PE=2 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 2.279e-15 Identity = 32/61 (52.46%), Postives = 43/61 (70.49%), Query Frame = 2 Query: 107 YYDGRYWTMWKLPMYGCTDATQVLKEVGEVQKEYPHSFVRIIGFDNKRQVQCISFIAAKPP 289 Y D RYWTMWKLPM+GCTD +QVL E+ K +P +++R++ FD RQVQ F+ +PP Sbjct: 111 YQDNRYWTMWKLPMFGCTDGSQVLSEIQACTKAFPDAYIRLVCFDANRQVQISGFLVHRPP 171
BLAST of CX287367 vs. ExPASy Swiss-Prot
Match: RBS4_ACECL (Ribulose bisphosphate carboxylase small chain 4, chloroplastic OS=Acetabularia cliftonii GN=RBCS-4 PE=2 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 2.279e-15 Identity = 32/61 (52.46%), Postives = 43/61 (70.49%), Query Frame = 2 Query: 107 YYDGRYWTMWKLPMYGCTDATQVLKEVGEVQKEYPHSFVRIIGFDNKRQVQCISFIAAKPP 289 Y D RYWTMWKLPM+GCTD +QVL E+ K +P +++R++ FD RQVQ F+ +PP Sbjct: 109 YQDNRYWTMWKLPMFGCTDGSQVLSEIQACTKAFPDAYIRLVCFDANRQVQISGFLVHRPP 169
BLAST of CX287367 vs. ExPASy Swiss-Prot
Match: RBS2_ACEAT (Ribulose bisphosphate carboxylase small chain 2, chloroplastic (Fragment) OS=Acetabularia acetabulum GN=RBCS-2 PE=2 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 2.279e-15 Identity = 32/61 (52.46%), Postives = 43/61 (70.49%), Query Frame = 2 Query: 107 YYDGRYWTMWKLPMYGCTDATQVLKEVGEVQKEYPHSFVRIIGFDNKRQVQCISFIAAKPP 289 Y D RYWTMWKLPM+GCTD +QVL E+ K +P +++R++ FD RQVQ F+ +PP Sbjct: 100 YQDNRYWTMWKLPMFGCTDGSQVLSEIQACTKAFPDAYIRLVCFDANRQVQISGFLVHRPP 160 The following BLAST results are available for this feature:
BLAST of CX287367 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 113
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Sequences
The
following sequences are available for this feature:
EST sequence >CX287367 ID=CX287367; Name=CX287367; organism=Citrus clementina; type=EST; length=404bpback to top |