CX287378
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX287378 vs. ExPASy Swiss-Prot
Match: PSBP_SINAL (Oxygen-evolving enhancer protein 2, chloroplastic OS=Sinapis alba GN=PSBP PE=2 SV=2) HSP 1 Score: 114.775 bits (286), Expect = 1.384e-25 Identity = 64/100 (64.00%), Postives = 78/100 (78.00%), Query Frame = 1 Query: 109 MASTQCFLHHHALSTTPARTS---SSQRHVSNIKPTQIVCRAQKQAVQKDDGSAVSRRLALTVLIGAAAVGSKVSPADAAYGESANVFGKPKTNTDFLPY 399 MA + CFLH AL+++ AR+S SSQR+VS K +VC+AQ+ ++D S VSRRLALT+L+GAAAVGSKVSPADAAYGE+ANVFGKPK NTDF Y Sbjct: 1 MAYSACFLHQSALASSTARSSPSSSSQRYVSISK---LVCKAQQ--THEEDNSTVSRRLALTLLVGAAAVGSKVSPADAAYGEAANVFGKPKKNTDFTAY 95
BLAST of CX287378 vs. ExPASy Swiss-Prot
Match: PSBP_NARPS (Oxygen-evolving enhancer protein 2, chloroplastic OS=Narcissus pseudonarcissus GN=PSBP PE=2 SV=1) HSP 1 Score: 98.5969 bits (244), Expect = 1.026e-20 Identity = 56/104 (53.85%), Postives = 68/104 (65.38%), Query Frame = 1 Query: 109 MASTQCFLHHHA-------LSTTPARTS---SSQRHVSNIKPTQIVCRAQKQAVQKDDGSAVSRRLALTVLIGAAAVGSKVSPADAAYGESANVFGKPKTNTDF 390 MAST CFLHHHA LS T + T+ Q H + ++ + C + A+ +SRRLALT+LIG AA+GS+VS ADAAYGESANVFGKPKTNTDF Sbjct: 1 MASTACFLHHHAPSPATSNLSRTRSATNRDEQQQEHSARLQSPEADCATENDAL-------LSRRLALTILIGGAALGSRVSAADAAYGESANVFGKPKTNTDF 97
BLAST of CX287378 vs. ExPASy Swiss-Prot
Match: PSBP_WHEAT (Oxygen-evolving enhancer protein 2, chloroplastic OS=Triticum aestivum GN=PSBP PE=2 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 4.767e-18 Identity = 53/99 (53.54%), Postives = 65/99 (65.66%), Query Frame = 1 Query: 109 MASTQCFLHHHALSTTPARTSSSQRHVSNIKPTQI-VCRAQKQAVQKDDGSAV-SRRLALTVLIGAAAVGSKVSPADAAYGESANVFGKPKTNTDFLPY 399 MAST CFLH + AR ++S R + TQ+ VC+AQK D + V SRR AL++L GAAA+ KVSPA AAYGE+ANVFGK K NTDF+ Y Sbjct: 1 MASTSCFLHQ-----STARLAASARPAPAVGRTQLFVCKAQKNDEAASDAAVVTSRRAALSLLAGAAAIAVKVSPAAAAYGEAANVFGKAKKNTDFVAY 94
BLAST of CX287378 vs. ExPASy Swiss-Prot
Match: PSBP_BRAJU (Oxygen-evolving enhancer protein 2, chloroplastic (Fragment) OS=Brassica juncea GN=PSBP PE=2 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 1.062e-17 Identity = 43/49 (87.76%), Postives = 47/49 (95.92%), Query Frame = 1 Query: 244 KDDGSAVSRRLALTVLIGAAAVGSKVSPADAAYGESANVFGKPKTNTDF 390 +DD S VSRRLALT+L+GAAAVGSKVSPADAAYGE+ANVFGKPKTNTDF Sbjct: 1 EDDTSTVSRRLALTLLVGAAAVGSKVSPADAAYGEAANVFGKPKTNTDF 49 The following BLAST results are available for this feature:
BLAST of CX287378 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 14
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Sequences
The
following sequences are available for this feature:
EST sequence >CX287378 ID=CX287378; Name=CX287378; organism=Citrus clementina; type=EST; length=400bpback to top |