CX287393
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX287393 vs. ExPASy Swiss-Prot
Match: PSAE_CHLRE (Photosystem I reaction center subunit IV, chloroplastic OS=Chlamydomonas reinhardtii GN=PSAE PE=1 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 2.951e-13 Identity = 37/56 (66.07%), Postives = 42/56 (75.00%), Query Frame = 1 Query: 268 VKILRRESYWYNGIGSVVAVDQDPKSRYPVVVRFNKVNYANVSTNNYALDEIEEVK 435 VKILR ESYW+N +G VV+VDQ RYPVVVRF NYA V+TNNYALDE+ K Sbjct: 43 VKILRPESYWFNQVGKVVSVDQSGV-RYPVVVRFENQNYAGVTTNNYALDEVVAAK 97
BLAST of CX287393 vs. ExPASy Swiss-Prot
Match: PSAE_ANASP (Photosystem I reaction center subunit IV OS=Anabaena sp. (strain PCC 7120) GN=psaE PE=3 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 1.913e-12 Identity = 32/56 (57.14%), Postives = 46/56 (82.14%), Query Frame = 1 Query: 268 VKILRRESYWYNGIGSVVAVDQDPKSRYPVVVRFNKVNYANVSTNNYALDEIEEVK 435 V+ILR ESYW+ +G+V +VDQ +YPV+VRF+KVNYA ++TNN+A+DE+ EV+ Sbjct: 8 VRILRPESYWFQDVGTVASVDQSG-IKYPVIVRFDKVNYAGINTNNFAVDELIEVE 62
BLAST of CX287393 vs. ExPASy Swiss-Prot
Match: PSAE_CYACA (Photosystem I reaction center subunit IV OS=Cyanidium caldarium GN=psaE PE=3 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 2.498e-12 Identity = 32/56 (57.14%), Postives = 46/56 (82.14%), Query Frame = 1 Query: 268 VKILRRESYWYNGIGSVVAVDQDPKSRYPVVVRFNKVNYANVSTNNYALDEIEEVK 435 V+ILR ESYW+N IG+V VDQ RYPV+VRF+KVNY+ ++TNN+A++E+ E++ Sbjct: 8 VRILRPESYWHNEIGTVATVDQSG-IRYPVIVRFDKVNYSGINTNNFAVNELVEIQ 62
BLAST of CX287393 vs. ExPASy Swiss-Prot
Match: PSAE_MASLA (Photosystem I reaction center subunit IV OS=Mastigocladus laminosus GN=psaE PE=3 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 3.263e-12 Identity = 32/56 (57.14%), Postives = 44/56 (78.57%), Query Frame = 1 Query: 268 VKILRRESYWYNGIGSVVAVDQDPKSRYPVVVRFNKVNYANVSTNNYALDEIEEVK 435 V+ILR ESYW+ IG+V +++Q RYPV+VRF+KVNYA V+TNN+A E+ EV+ Sbjct: 8 VRILRPESYWFQDIGTVASIEQGGTIRYPVIVRFDKVNYAGVNTNNFAEYELVEVE 63
BLAST of CX287393 vs. ExPASy Swiss-Prot
Match: PSAE_ANAVT (Photosystem I reaction center subunit IV OS=Anabaena variabilis (strain ATCC 29413 / PCC 7937) GN=psaE PE=1 SV=3) HSP 1 Score: 70.4774 bits (171), Expect = 4.262e-12 Identity = 31/56 (55.36%), Postives = 46/56 (82.14%), Query Frame = 1 Query: 268 VKILRRESYWYNGIGSVVAVDQDPKSRYPVVVRFNKVNYANVSTNNYALDEIEEVK 435 V+ILR ESYW+ +G+V +VDQ +YPV+VRF+KVNY+ ++TNN+A+DE+ EV+ Sbjct: 8 VRILRPESYWFQDVGTVASVDQSG-IKYPVIVRFDKVNYSGINTNNFAVDELIEVE 62
BLAST of CX287393 vs. ExPASy Swiss-Prot
Match: PSAE_PHATR (Photosystem I reaction center subunit IV OS=Phaeodactylum tricornutum GN=psaE PE=3 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 5.566e-12 Identity = 33/55 (60.00%), Postives = 41/55 (74.55%), Query Frame = 1 Query: 268 VKILRRESYWYNGIGSVVAVDQDPKSRYPVVVRFNKVNYANVSTNNYALDEIEEV 432 V+ILR ESYW+N +G+V VDQ RYP VVRF KVNY+ +TNN+AL E+ EV Sbjct: 8 VRILREESYWFNEVGTVATVDQSG-IRYPAVVRFEKVNYSGTNTNNFALSELVEV 61
BLAST of CX287393 vs. ExPASy Swiss-Prot
Match: PSAE_GUITH (Photosystem I reaction center subunit IV OS=Guillardia theta GN=psaE PE=3 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 5.566e-12 Identity = 33/55 (60.00%), Postives = 43/55 (78.18%), Query Frame = 1 Query: 268 VKILRRESYWYNGIGSVVAVDQDPKSRYPVVVRFNKVNYANVSTNNYALDEIEEV 432 V+ILR+ESYWY +G+V VD RYPVVVRF KV+Y+ V+TNN++LDE+ EV Sbjct: 8 VRILRKESYWYQEVGTVATVDTSG-IRYPVVVRFEKVSYSGVNTNNFSLDEVIEV 61
BLAST of CX287393 vs. ExPASy Swiss-Prot
Match: PSAE_NOSS8 (Photosystem I reaction center subunit IV OS=Nostoc sp. (strain PCC 8009) GN=psaE PE=1 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 1.240e-11 Identity = 31/56 (55.36%), Postives = 44/56 (78.57%), Query Frame = 1 Query: 268 VKILRRESYWYNGIGSVVAVDQDPKSRYPVVVRFNKVNYANVSTNNYALDEIEEVK 435 V+ILR ESYW+ +G+V +VDQ +YPV+VRF KVNY+ ++TNN+A DE+ EV+ Sbjct: 8 VRILRPESYWFQDVGTVASVDQSG-IKYPVIVRFEKVNYSGINTNNFAEDELVEVE 62
BLAST of CX287393 vs. ExPASy Swiss-Prot
Match: PSAE_ODOSI (Photosystem I reaction center subunit IV OS=Odontella sinensis GN=psaE PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 1.619e-11 Identity = 30/55 (54.55%), Postives = 42/55 (76.36%), Query Frame = 1 Query: 268 VKILRRESYWYNGIGSVVAVDQDPKSRYPVVVRFNKVNYANVSTNNYALDEIEEV 432 V+ILR+ESYW+N +G++ +DQ RYP VVRF VNY+ +TNN+AL+E+ EV Sbjct: 8 VRILRKESYWFNQVGTIATIDQSG-IRYPAVVRFENVNYSGTNTNNFALEELIEV 61
BLAST of CX287393 vs. ExPASy Swiss-Prot
Match: PSAE_NOSP7 (Photosystem I reaction center subunit IV OS=Nostoc punctiforme (strain ATCC 29133 / PCC 73102) GN=psaE PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 1.619e-11 Identity = 30/56 (53.57%), Postives = 44/56 (78.57%), Query Frame = 1 Query: 268 VKILRRESYWYNGIGSVVAVDQDPKSRYPVVVRFNKVNYANVSTNNYALDEIEEVK 435 V+ILR ESYW+ +G+V ++DQ +YPV+VRF KVNY+ ++TNN+A DE+ EV+ Sbjct: 8 VRILRPESYWFQDLGTVASIDQSG-IKYPVIVRFEKVNYSGINTNNFAQDELVEVE 62 The following BLAST results are available for this feature:
BLAST of CX287393 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 22
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Sequences
The
following sequences are available for this feature:
EST sequence >CX287393 ID=CX287393; Name=CX287393; organism=Citrus clementina; type=EST; length=473bpback to top |