CX287404
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX287404 vs. ExPASy Swiss-Prot
Match: PCNA_XENLA (Proliferating cell nuclear antigen OS=Xenopus laevis GN=pcna PE=2 SV=1) HSP 1 Score: 160.614 bits (405), Expect = 3.306e-39 Identity = 75/117 (64.10%), Postives = 98/117 (83.76%), Query Frame = 1 Query: 19 EFARICKDLASIGDTVVISVTKEGVKFSTRGDIGTANIVLRQNTTVDKPEEATIIEMHEPVSLTFALRYMNSFTRATPLSNTVTISLSSELPVVVEYKIAEMGYIRFYLAPKIEEDE 369 EFARIC+DL+ IGD VVIS K+GVKFS G++GT N+ L Q + VDK EEA IEM+EPV LTFALRY+N FT+ATPLS TV +S+S+++P+VVEYKIA+M ++++YLAPKIE++E Sbjct: 143 EFARICRDLSQIGDAVVISCAKDGVKFSASGELGTGNVKLSQTSNVDKEEEAVTIEMNEPVQLTFALRYLNFFTKATPLSPTVILSMSADIPLVVEYKIADMEHVKYYLAPKIEDEE 259
BLAST of CX287404 vs. ExPASy Swiss-Prot
Match: PCNA_HAPBU (Proliferating cell nuclear antigen OS=Haplochromis burtoni GN=pcna PE=2 SV=1) HSP 1 Score: 159.073 bits (401), Expect = 9.618e-39 Identity = 74/116 (63.79%), Postives = 97/116 (83.62%), Query Frame = 1 Query: 19 EFARICKDLASIGDTVVISVTKEGVKFSTRGDIGTANIVLRQNTTVDKPEEATIIEMHEPVSLTFALRYMNSFTRATPLSNTVTISLSSELPVVVEYKIAEMGYIRFYLAPKIEED 366 EFARIC+DL+ IGD V+IS K+GVKFS G++GT NI L Q + VDK +EA IEM+EPV L FAL Y+N FT+ATPLS TVT+S+S+++P+VVEYKIA+MG+I++YLAPKI+E+ Sbjct: 143 EFARICRDLSQIGDAVMISCAKDGVKFSASGELGTGNIKLSQTSNVDKEDEAVTIEMNEPVQLIFALNYLNFFTKATPLSKTVTLSMSADIPLVVEYKIADMGHIKYYLAPKIDEE 258
BLAST of CX287404 vs. ExPASy Swiss-Prot
Match: PCNA_DANRE (Proliferating cell nuclear antigen OS=Danio rerio GN=pcna PE=1 SV=2) HSP 1 Score: 158.688 bits (400), Expect = 1.256e-38 Identity = 73/116 (62.93%), Postives = 97/116 (83.62%), Query Frame = 1 Query: 19 EFARICKDLASIGDTVVISVTKEGVKFSTRGDIGTANIVLRQNTTVDKPEEATIIEMHEPVSLTFALRYMNSFTRATPLSNTVTISLSSELPVVVEYKIAEMGYIRFYLAPKIEED 366 EFARIC+DL+ IGD V+IS K+GVKFS G++GT NI L Q + VDK +EA IEM+EPV L FAL Y+N FT+ATPLS TVT+S+S+++P+VVEYKIA+MG++++YLAPKI+E+ Sbjct: 143 EFARICRDLSQIGDAVMISCAKDGVKFSASGELGTGNIKLSQTSNVDKEDEAVTIEMNEPVQLIFALNYLNFFTKATPLSKTVTLSMSADIPLVVEYKIADMGHVKYYLAPKIDEE 258
BLAST of CX287404 vs. ExPASy Swiss-Prot
Match: PCNA_DROME (Proliferating cell nuclear antigen OS=Drosophila melanogaster GN=mus209 PE=1 SV=2) HSP 1 Score: 157.147 bits (396), Expect = 3.655e-38 Identity = 75/117 (64.10%), Postives = 96/117 (82.05%), Query Frame = 1 Query: 19 EFARICKDLASIGDTVVISVTKEGVKFSTRGDIGTANIVLRQNTTVDKPEEATIIEMHEPVSLTFALRYMNSFTRATPLSNTVTISLSSELPVVVEYKIAEMGYIRFYLAPKIEEDE 369 EFARIC+DLA ++VVI TKEGVKFS GD+GTANI L Q +VDK EEA IIEM EPV+LTFA RY+N+FT+ATPLS V +S+ +++P+VVEY I ++G+IR+YLAPKIE++E Sbjct: 143 EFARICRDLAQFSESVVICCTKEGVKFSASGDVGTANIKLAQTGSVDKEEEAVIIEMQEPVTLTFACRYLNAFTKATPLSTQVQLSMCADVPLVVEYAIKDLGHIRYYLAPKIEDNE 259
BLAST of CX287404 vs. ExPASy Swiss-Prot
Match: PCNA_SARCR (Proliferating cell nuclear antigen OS=Sarcophaga crassipalpis GN=PCNA PE=3 SV=1) HSP 1 Score: 156.377 bits (394), Expect = 6.234e-38 Identity = 73/117 (62.39%), Postives = 97/117 (82.91%), Query Frame = 1 Query: 19 EFARICKDLASIGDTVVISVTKEGVKFSTRGDIGTANIVLRQNTTVDKPEEATIIEMHEPVSLTFALRYMNSFTRATPLSNTVTISLSSELPVVVEYKIAEMGYIRFYLAPKIEEDE 369 EFARIC+DLA ++++I TKEGVKFS GD+G+AN+ L Q ++VDK EEA IIEM EPV+LTFA RY+N+FT+ATPLS V +S+ +++P+VVEY I E+G+IR+YLAPKIE+DE Sbjct: 143 EFARICRDLAQFSESMLICCTKEGVKFSASGDVGSANVKLAQTSSVDKEEEAVIIEMQEPVTLTFACRYLNAFTKATPLSAQVQLSMCADVPLVVEYAIKELGHIRYYLAPKIEDDE 259
BLAST of CX287404 vs. ExPASy Swiss-Prot
Match: PCNA_BOMMO (Proliferating cell nuclear antigen OS=Bombyx mori GN=PCNA PE=2 SV=1) HSP 1 Score: 154.451 bits (389), Expect = 2.369e-37 Identity = 71/118 (60.17%), Postives = 99/118 (83.90%), Query Frame = 1 Query: 16 AEFARICKDLASIGDTVVISVTKEGVKFSTRGDIGTANIVLRQNTTVDKPEEATIIEMHEPVSLTFALRYMNSFTRATPLSNTVTISLSSELPVVVEYKIAEMGYIRFYLAPKIEEDE 369 +EFARIC+DL+ G+++VIS TKEGVKFS GDIG+AN+ L Q ++DK EEA +IEM EPV+LTFA +Y+N FT+AT LS V +S+S+++P+VVEY+I ++G+IR+YLAPKIEE++ Sbjct: 142 SEFARICRDLSQFGESMVISCTKEGVKFSATGDIGSANVKLAQTASIDKEEEAVVIEMEEPVTLTFACQYLNYFTKATSLSPQVQLSMSADVPLVVEYRIPDIGHIRYYLAPKIEEED 259
BLAST of CX287404 vs. ExPASy Swiss-Prot
Match: PCNA_ANGJA (Proliferating cell nuclear antigen OS=Anguilla japonica GN=pcna PE=2 SV=1) HSP 1 Score: 153.295 bits (386), Expect = 5.278e-37 Identity = 69/116 (59.48%), Postives = 96/116 (82.76%), Query Frame = 1 Query: 19 EFARICKDLASIGDTVVISVTKEGVKFSTRGDIGTANIVLRQNTTVDKPEEATIIEMHEPVSLTFALRYMNSFTRATPLSNTVTISLSSELPVVVEYKIAEMGYIRFYLAPKIEED 366 EFARIC+DL+ IGD V+IS K+GV FS G++GT N+ L Q + VD+ ++A IEM+EPV L FAL Y+N FT+ATPLS TVT+S+S+++P+VVEYKIA+MG++++YLAPKI+E+ Sbjct: 143 EFARICRDLSQIGDAVMISCAKDGVMFSASGELGTGNVKLSQTSNVDEEDDAVTIEMNEPVQLIFALNYLNFFTKATPLSKTVTLSMSADIPLVVEYKIADMGHVKYYLAPKIDEE 258
BLAST of CX287404 vs. ExPASy Swiss-Prot
Match: PCNA_STYCL (Proliferating cell nuclear antigen OS=Styela clava GN=PCNA PE=2 SV=1) HSP 1 Score: 142.895 bits (359), Expect = 7.133e-34 Identity = 65/120 (54.17%), Postives = 97/120 (80.83%), Query Frame = 1 Query: 19 EFARICKDLASIGDTVVISVTKEGVKFSTRGDIGTANIVLRQNTTVD-KPEEATIIEMHEPVSLTFALRYMNSFTRATPLSNTVTISLSSELPVVVEYKIAEMGYIRFYLAPKIEEDEDE 375 EF RIC+DL+ IG+ VVI+ TK+GV+FS +GD+G I L+QNT D K EE +E+ EPV LTFA++Y+N F +A+PLS +V +S+S+ +P+VVEYK+A+MG+I+++LAPKIE++E++ Sbjct: 143 EFGRICRDLSQIGECVVITCTKDGVQFSAKGDLGAGKIKLKQNTGSDIKEEEQVTVEISEPVQLTFAIKYLNLFAKASPLSPSVCLSMSNNVPLVVEYKVADMGHIKYFLAPKIEDEEEQ 262
BLAST of CX287404 vs. ExPASy Swiss-Prot
Match: PCNA_DICDI (Proliferating cell nuclear antigen OS=Dictyostelium discoideum GN=pcna PE=3 SV=1) HSP 1 Score: 132.494 bits (332), Expect = 9.640e-31 Identity = 65/116 (56.03%), Postives = 88/116 (75.86%), Query Frame = 1 Query: 16 AEFARICKDLASIGDTVVISVTKEGVKFSTRGDIGTANIVLRQNTTVDKP-EEATIIEMHEPVSLTFALRYMNSFTRATPLSNTVTISLSSELPVVVEYKIAEMGYIRFYLAPKIE 360 AE RIC+DL+ IG+ V IS KEGVKFS GD G+ NI ++ + D P E+AT+IE EPV L FAL+++++FT+ATPLS VT+S+S +PVVVEYKI ++G++ F+LAPKIE Sbjct: 143 AELQRICRDLSIIGEIVTISANKEGVKFSVSGDSGSGNITIKPTSDSDVPAEQATVIESKEPVVLNFALKFLSNFTKATPLSPMVTLSMSEGIPVVVEYKIDDLGFLGFFLAPKIE 258
BLAST of CX287404 vs. ExPASy Swiss-Prot
Match: PCNA_SCHPO (Proliferating cell nuclear antigen OS=Schizosaccharomyces pombe GN=pcn1 PE=1 SV=1) HSP 1 Score: 124.405 bits (311), Expect = 2.625e-28 Identity = 57/120 (47.50%), Postives = 93/120 (77.50%), Query Frame = 1 Query: 16 AEFARICKDLASIGDTVVISVTKEGVKFSTRGDIGTANIVLRQNTTVDKPEEATIIEMHEPVSLTFALRYMNSFTRATPLSNTVTISLSSELPVVVEYKIAEMGYIRFYLAPKIEEDEDE 375 AEF RI +DL ++ D+V I+ +KEGV+FS +GDIG + L+Q+T + +++ I + + V+LTF+L+Y+ FT+ATPL+ VT+S+S+++P++VEYK+ E G++RFYLAPKI E+++E Sbjct: 142 AEFQRITRDLLTLSDSVTINASKEGVRFSCKGDIGNGSTTLKQHTDLSDQDQSIEISLTQAVTLTFSLKYLAQFTKATPLATRVTLSMSNDVPLLVEYKM-ESGFLRFYLAPKIGEEDEE 260 The following BLAST results are available for this feature:
BLAST of CX287404 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 35
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Sequences
The
following sequences are available for this feature:
EST sequence >CX287404 ID=CX287404; Name=CX287404; organism=Citrus clementina; type=EST; length=484bpback to top |