CX287432
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX287432 vs. ExPASy Swiss-Prot
Match: ATPA_HORVU (ATP synthase subunit alpha, chloroplastic OS=Hordeum vulgare GN=atpA PE=3 SV=1) HSP 1 Score: 290.426 bits (742), Expect = 2.411e-78 Identity = 149/153 (97.39%), Postives = 150/153 (98.04%), Query Frame = 3 Query: 3 AMDYTIVVAETADSPATLQYLAPYTGAALAEYFMYRERHTLIIYDDLSKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKLGSQLGEGSMTALPIVETQSGDVSAYIPTNVISITDGQIFLSADLFNAGIRPAINVGISVSRVGSA 461 AM+YTIVVAE ADSPATLQYLAPYTGAALAEYFMYRERHTLIIYDDLSKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKL S LGEGSMTALPIVETQSGDVSAYIPTNVISITDGQIFLSADLFNAGIRPAINVGISVSRVGSA Sbjct: 218 AMEYTIVVAEMADSPATLQYLAPYTGAALAEYFMYRERHTLIIYDDLSKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKLNSLLGEGSMTALPIVETQSGDVSAYIPTNVISITDGQIFLSADLFNAGIRPAINVGISVSRVGSA 370
BLAST of CX287432 vs. ExPASy Swiss-Prot
Match: ATPA_AGRST (ATP synthase subunit alpha, chloroplastic OS=Agrostis stolonifera GN=atpA PE=3 SV=1) HSP 1 Score: 290.426 bits (742), Expect = 2.411e-78 Identity = 149/153 (97.39%), Postives = 150/153 (98.04%), Query Frame = 3 Query: 3 AMDYTIVVAETADSPATLQYLAPYTGAALAEYFMYRERHTLIIYDDLSKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKLGSQLGEGSMTALPIVETQSGDVSAYIPTNVISITDGQIFLSADLFNAGIRPAINVGISVSRVGSA 461 AM+YTIVVAE ADSPATLQYLAPYTGAALAEYFMYRERHTLIIYDDLSKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKL S LGEGSMTALPIVETQSGDVSAYIPTNVISITDGQIFLSADLFNAGIRPAINVGISVSRVGSA Sbjct: 218 AMEYTIVVAEMADSPATLQYLAPYTGAALAEYFMYRERHTLIIYDDLSKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKLNSLLGEGSMTALPIVETQSGDVSAYIPTNVISITDGQIFLSADLFNAGIRPAINVGISVSRVGSA 370
BLAST of CX287432 vs. ExPASy Swiss-Prot
Match: ATPA_SILLA (ATP synthase subunit alpha, chloroplastic OS=Silene latifolia GN=atpA PE=3 SV=1) HSP 1 Score: 290.041 bits (741), Expect = 3.148e-78 Identity = 149/153 (97.39%), Postives = 150/153 (98.04%), Query Frame = 3 Query: 3 AMDYTIVVAETADSPATLQYLAPYTGAALAEYFMYRERHTLIIYDDLSKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKLGSQLGEGSMTALPIVETQSGDVSAYIPTNVISITDGQIFLSADLFNAGIRPAINVGISVSRVGSA 461 AM+YTIVVAETADSPATLQYLAPYTGAALAEYFMYRERHTLIIYDDLSKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAK S LGEGSMTALPIVETQSGDVSAYIPTNVISITDGQIFLSADLFNAGIRPAINVGISVSRVGSA Sbjct: 218 AMEYTIVVAETADSPATLQYLAPYTGAALAEYFMYRERHTLIIYDDLSKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKSSSFLGEGSMTALPIVETQSGDVSAYIPTNVISITDGQIFLSADLFNAGIRPAINVGISVSRVGSA 370
BLAST of CX287432 vs. ExPASy Swiss-Prot
Match: ATPA_RANMC (ATP synthase subunit alpha, chloroplastic OS=Ranunculus macranthus GN=atpA PE=3 SV=1) HSP 1 Score: 290.041 bits (741), Expect = 3.148e-78 Identity = 147/152 (96.71%), Postives = 151/152 (99.34%), Query Frame = 3 Query: 6 MDYTIVVAETADSPATLQYLAPYTGAALAEYFMYRERHTLIIYDDLSKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKLGSQLGEGSMTALPIVETQSGDVSAYIPTNVISITDGQIFLSADLFNAGIRPAINVGISVSRVGSA 461 M+YTIVVAETAD+PATLQYLAPYTGAALAEYFMYRERHTLIIYDDLSKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKL S+LGEGSMTALPIVETQSGDVSAYIPTNVISITDGQIFLSADLFN+GIRPAINVGISVSRVGSA Sbjct: 219 MEYTIVVAETADAPATLQYLAPYTGAALAEYFMYRERHTLIIYDDLSKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKLSSRLGEGSMTALPIVETQSGDVSAYIPTNVISITDGQIFLSADLFNSGIRPAINVGISVSRVGSA 370
BLAST of CX287432 vs. ExPASy Swiss-Prot
Match: ATPA_NYMAL (ATP synthase subunit alpha, chloroplastic OS=Nymphaea alba GN=atpA PE=3 SV=1) HSP 1 Score: 290.041 bits (741), Expect = 3.148e-78 Identity = 148/153 (96.73%), Postives = 151/153 (98.69%), Query Frame = 3 Query: 3 AMDYTIVVAETADSPATLQYLAPYTGAALAEYFMYRERHTLIIYDDLSKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKLGSQLGEGSMTALPIVETQSGDVSAYIPTNVISITDGQIFLSADLFNAGIRPAINVGISVSRVGSA 461 AM+YTIVVAETADSPATLQYLAPYTGAALAEYFMYR+RHTLIIYDDLSKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAK S+LGEGSMTALPIVETQSGDVSAYIPTNVISITDGQIFLSADLFNAGIRPAINVGISVSRVGSA Sbjct: 218 AMEYTIVVAETADSPATLQYLAPYTGAALAEYFMYRQRHTLIIYDDLSKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKPSSRLGEGSMTALPIVETQSGDVSAYIPTNVISITDGQIFLSADLFNAGIRPAINVGISVSRVGSA 370
BLAST of CX287432 vs. ExPASy Swiss-Prot
Match: ATPA_CYCTA (ATP synthase subunit alpha, chloroplastic OS=Cycas taitungensis GN=atpA PE=3 SV=1) HSP 1 Score: 290.041 bits (741), Expect = 3.148e-78 Identity = 147/153 (96.08%), Postives = 152/153 (99.35%), Query Frame = 3 Query: 3 AMDYTIVVAETADSPATLQYLAPYTGAALAEYFMYRERHTLIIYDDLSKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKLGSQLGEGSMTALPIVETQSGDVSAYIPTNVISITDGQIFLSADLFNAGIRPAINVGISVSRVGSA 461 AM+YTIVVAETADSPATLQYLAPYTGAALAEYFMY+E+HTLIIYDDLSKQA+AYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKL SQLGEGSMTALPIVETQ+GDVSAYIPTNVISITDGQIFLSADLFNAGIRPAINVGISVSRVGSA Sbjct: 218 AMEYTIVVAETADSPATLQYLAPYTGAALAEYFMYKEQHTLIIYDDLSKQARAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKLSSQLGEGSMTALPIVETQAGDVSAYIPTNVISITDGQIFLSADLFNAGIRPAINVGISVSRVGSA 370
BLAST of CX287432 vs. ExPASy Swiss-Prot
Match: ATPA_CUSRE (ATP synthase subunit alpha, plastid OS=Cuscuta reflexa GN=atpA PE=3 SV=1) HSP 1 Score: 290.041 bits (741), Expect = 3.148e-78 Identity = 148/153 (96.73%), Postives = 150/153 (98.04%), Query Frame = 3 Query: 3 AMDYTIVVAETADSPATLQYLAPYTGAALAEYFMYRERHTLIIYDDLSKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKLGSQLGEGSMTALPIVETQSGDVSAYIPTNVISITDGQIFLSADLFNAGIRPAINVGISVSRVGSA 461 AM+YTIVVAETADSPATLQYLAPYTGAALAEYFMY ERHTLIIYDDLSKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKL S+LGEGSMTALPIVETQSGDVSAYIPTNVISITDGQIFLS DLFNAGIRPAINVGISVSRVGSA Sbjct: 218 AMEYTIVVAETADSPATLQYLAPYTGAALAEYFMYSERHTLIIYDDLSKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKLSSKLGEGSMTALPIVETQSGDVSAYIPTNVISITDGQIFLSVDLFNAGIRPAINVGISVSRVGSA 370
BLAST of CX287432 vs. ExPASy Swiss-Prot
Match: ATPA_CUSEX (ATP synthase subunit alpha, plastid OS=Cuscuta exaltata GN=atpA PE=3 SV=1) HSP 1 Score: 290.041 bits (741), Expect = 3.148e-78 Identity = 148/153 (96.73%), Postives = 151/153 (98.69%), Query Frame = 3 Query: 3 AMDYTIVVAETADSPATLQYLAPYTGAALAEYFMYRERHTLIIYDDLSKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKLGSQLGEGSMTALPIVETQSGDVSAYIPTNVISITDGQIFLSADLFNAGIRPAINVGISVSRVGSA 461 AM+YTIVVAETADSPATLQYLAPYTGAALAEYFMY ERHTLIIYDDLSKQAQAYRQ+SLLLRRPPGREAYPGDVFYLHSRLLERAAKL S+LGEGSMTALPIVETQSGDVSAYIPTNVISITDGQIFLSADLFNAGIRPAINVGISVSRVGSA Sbjct: 218 AMEYTIVVAETADSPATLQYLAPYTGAALAEYFMYSERHTLIIYDDLSKQAQAYRQISLLLRRPPGREAYPGDVFYLHSRLLERAAKLSSKLGEGSMTALPIVETQSGDVSAYIPTNVISITDGQIFLSADLFNAGIRPAINVGISVSRVGSA 370
BLAST of CX287432 vs. ExPASy Swiss-Prot
Match: ATPA_ANTFO (ATP synthase subunit alpha, chloroplastic OS=Anthoceros formosae GN=atpA PE=2 SV=1) HSP 1 Score: 290.041 bits (741), Expect = 3.148e-78 Identity = 147/153 (96.08%), Postives = 152/153 (99.35%), Query Frame = 3 Query: 3 AMDYTIVVAETADSPATLQYLAPYTGAALAEYFMYRERHTLIIYDDLSKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKLGSQLGEGSMTALPIVETQSGDVSAYIPTNVISITDGQIFLSADLFNAGIRPAINVGISVSRVGSA 461 A++YTIVVAETADSPATLQYLAPYTGAALAEYFMYR++HTLIIYDDLSKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKL SQLGEGSMTALPIVETQ+GDVSAYIPTNVISITDGQIFLSADLFNAGIRPAINVGISVSRVGSA Sbjct: 218 ALEYTIVVAETADSPATLQYLAPYTGAALAEYFMYRKQHTLIIYDDLSKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKLSSQLGEGSMTALPIVETQAGDVSAYIPTNVISITDGQIFLSADLFNAGIRPAINVGISVSRVGSA 370
BLAST of CX287432 vs. ExPASy Swiss-Prot
Match: ATPA_NICTO (ATP synthase subunit alpha, chloroplastic OS=Nicotiana tomentosiformis GN=atpA PE=3 SV=1) HSP 1 Score: 289.656 bits (740), Expect = 4.112e-78 Identity = 148/153 (96.73%), Postives = 150/153 (98.04%), Query Frame = 3 Query: 3 AMDYTIVVAETADSPATLQYLAPYTGAALAEYFMYRERHTLIIYDDLSKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKLGSQLGEGSMTALPIVETQSGDVSAYIPTNVISITDGQIFLSADLFNAGIRPAINVGISVSRVGSA 461 AM+YTIVVAETADSPATLQYLAPYTGAALAEYFMYRERHTLIIYDD SKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKL S LGEGSMTALPIVETQSGDVSAYIPTNVISITDGQIFLSADLFN+GIRPAINVGISVSRVGSA Sbjct: 218 AMEYTIVVAETADSPATLQYLAPYTGAALAEYFMYRERHTLIIYDDPSKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKLSSSLGEGSMTALPIVETQSGDVSAYIPTNVISITDGQIFLSADLFNSGIRPAINVGISVSRVGSA 370 The following BLAST results are available for this feature:
BLAST of CX287432 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CX287432 ID=CX287432; Name=CX287432; organism=Citrus clementina; type=EST; length=463bpback to top |