CX287581
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX287581 vs. ExPASy Swiss-Prot
Match: PHY1_PHYPA (Phytochrome 1 OS=Physcomitrella patens GN=PHY1 PE=2 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 6.067e-13 Identity = 34/64 (53.12%), Postives = 48/64 (75.00%), Query Frame = -1 Query: 384 FRLTHPGEGIPSHLIEDMYNGRNQWTTPEGLGLKLSRKLLIMMNGRVRYVRENSKCYFVIDLEL 575 FR++HPG G+P L+ +MY+ R + T EGLGL + RKL+ +MNG V YVRE +CYFV+++EL Sbjct: 1049 FRVSHPGAGLPEELVLEMYD-RGKGMTQEGLGLNMCRKLVRLMNGDVHYVREAMQCYFVVNVEL 1111
BLAST of CX287581 vs. ExPASy Swiss-Prot
Match: PHY1_SELMA (Phytochrome 1 OS=Selaginella martensii GN=PHY1 PE=3 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 1.035e-12 Identity = 33/64 (51.56%), Postives = 47/64 (73.44%), Query Frame = -1 Query: 384 FRLTHPGEGIPSHLIEDMYNGRNQWTTPEGLGLKLSRKLLIMMNGRVRYVRENSKCYFVIDLEL 575 FR+THPG G+P L+++M++ R + T EGLGL + RKL+ +MNG V Y+RE K YF++ LEL Sbjct: 1055 FRITHPGVGLPEELVQEMFD-RGRGMTQEGLGLSMCRKLVKLMNGEVEYIREAGKNYFLVSLEL 1117
BLAST of CX287581 vs. ExPASy Swiss-Prot
Match: PHYD_ARATH (Phytochrome D OS=Arabidopsis thaliana GN=PHYD PE=1 SV=2) HSP 1 Score: 70.4774 bits (171), Expect = 6.707e-12 Identity = 31/64 (48.44%), Postives = 48/64 (75.00%), Query Frame = -1 Query: 384 FRLTHPGEGIPSHLIEDMYNGRNQWTTPEGLGLKLSRKLLIMMNGRVRYVRENSKCYFVIDLEL 575 FR+ GEG+P ++DM++ ++WT+PEGLGL + RK+L +MNG V+Y+RE + YF+I +EL Sbjct: 1091 FRMACAGEGVPPEKVQDMFHS-SRWTSPEGLGLSVCRKILKLMNGGVQYIREFERSYFLIVIEL 1153
BLAST of CX287581 vs. ExPASy Swiss-Prot
Match: PHYB_ORYSJ (Phytochrome B OS=Oryza sativa subsp. japonica GN=PHYB PE=2 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 1.144e-11 Identity = 30/64 (46.88%), Postives = 47/64 (73.44%), Query Frame = -1 Query: 384 FRLTHPGEGIPSHLIEDMYNGRNQWTTPEGLGLKLSRKLLIMMNGRVRYVRENSKCYFVIDLEL 575 FR PGEG+P +++DM++ ++WTT EG+GL + RK+L +M G V+Y+RE+ + +F I LEL Sbjct: 1097 FRFACPGEGLPPEIVQDMFSN-SRWTTQEGIGLSICRKILKLMGGEVQYIRESERSFFHIVLEL 1159
BLAST of CX287581 vs. ExPASy Swiss-Prot
Match: PHYB_ORYSI (Phytochrome B OS=Oryza sativa subsp. indica GN=PHYB PE=3 SV=2) HSP 1 Score: 69.707 bits (169), Expect = 1.144e-11 Identity = 30/64 (46.88%), Postives = 47/64 (73.44%), Query Frame = -1 Query: 384 FRLTHPGEGIPSHLIEDMYNGRNQWTTPEGLGLKLSRKLLIMMNGRVRYVRENSKCYFVIDLEL 575 FR PGEG+P +++DM++ ++WTT EG+GL + RK+L +M G V+Y+RE+ + +F I LEL Sbjct: 1097 FRFACPGEGLPPEIVQDMFSN-SRWTTQEGIGLSICRKILKLMGGEVQYIRESERSFFHIVLEL 1159 The following BLAST results are available for this feature:
BLAST of CX287581 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 15
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Sequences
The
following sequences are available for this feature:
EST sequence >CX287581 ID=CX287581; Name=CX287581; organism=Citrus clementina; type=EST; length=575bpback to top |