CX287606

Overview
NameCX287606
Unique NameCX287606
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length592
Libraries
Library NameType
Veg1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX287606 vs. ExPASy Swiss-Prot
Match: PP2A3_ORYSJ (Serine/threonine-protein phosphatase PP2A-3 catalytic subunit OS=Oryza sativa subsp. japonica GN=PP2A3 PE=2 SV=1)

HSP 1 Score: 218.394 bits (555), Expect = 2.141e-56
Identity = 104/128 (81.25%), Postives = 116/128 (90.62%), Query Frame = 2
Query:  209 NSHGNLDEQIAQLMQCKPLSEQEVRVLCEKAKEILMDESNVQPVKSPVTICGDIHGQFHDLAELFRIGGKCPDTNYLFMGDYVDRGYYSVETVTLLVSLKVRYPQRITILRGNHESRQITQVYGFYDE 592
            +SHG+LD QIAQL +CK L+E EVR LCE+AK ILM+E NVQPV+ PVT+CGDIHGQF+DL ELFRIGG+ PDTNYLFMGDYVDRGYYSVETV+LLV+LKVRY  RITILRGNHESRQITQVYGFYDE
Sbjct:    3 SSHGDLDRQIAQLRECKHLAEGEVRALCEQAKAILMEEWNVQPVRCPVTVCGDIHGQFYDLIELFRIGGEAPDTNYLFMGDYVDRGYYSVETVSLLVALKVRYRDRITILRGNHESRQITQVYGFYDE 130          
BLAST of CX287606 vs. ExPASy Swiss-Prot
Match: PP2A3_ORYSI (Serine/threonine-protein phosphatase PP2A-3 catalytic subunit OS=Oryza sativa subsp. indica GN=PP2A3 PE=2 SV=2)

HSP 1 Score: 218.394 bits (555), Expect = 2.141e-56
Identity = 104/128 (81.25%), Postives = 116/128 (90.62%), Query Frame = 2
Query:  209 NSHGNLDEQIAQLMQCKPLSEQEVRVLCEKAKEILMDESNVQPVKSPVTICGDIHGQFHDLAELFRIGGKCPDTNYLFMGDYVDRGYYSVETVTLLVSLKVRYPQRITILRGNHESRQITQVYGFYDE 592
            +SHG+LD QIAQL +CK L+E EVR LCE+AK ILM+E NVQPV+ PVT+CGDIHGQF+DL ELFRIGG+ PDTNYLFMGDYVDRGYYSVETV+LLV+LKVRY  RITILRGNHESRQITQVYGFYDE
Sbjct:    3 SSHGDLDRQIAQLRECKHLAEGEVRALCEQAKAILMEEWNVQPVRCPVTVCGDIHGQFYDLIELFRIGGEAPDTNYLFMGDYVDRGYYSVETVSLLVALKVRYRDRITILRGNHESRQITQVYGFYDE 130          
BLAST of CX287606 vs. ExPASy Swiss-Prot
Match: PP2A1_NEUCR (Serine/threonine-protein phosphatase PP2A catalytic subunit OS=Neurospora crassa GN=pph-1 PE=3 SV=3)

HSP 1 Score: 216.853 bits (551), Expect = 6.229e-56
Identity = 101/123 (82.11%), Postives = 110/123 (89.43%), Query Frame = 2
Query:  224 LDEQIAQLMQCKPLSEQEVRVLCEKAKEILMDESNVQPVKSPVTICGDIHGQFHDLAELFRIGGKCPDTNYLFMGDYVDRGYYSVETVTLLVSLKVRYPQRITILRGNHESRQITQVYGFYDE 592
            LD  I  LM CK L+E +V+ LCEKA+E+L DESNVQPVK PVT+CGDIHGQFHDL ELF+IGG CPDTNYLFMGDYVDRGYYSVETVTLLV+LK+RYP RITILRGNHESRQITQVYGFYDE
Sbjct:   28 LDGWIESLMNCKQLAESDVQRLCEKAREVLQDESNVQPVKCPVTVCGDIHGQFHDLMELFKIGGSCPDTNYLFMGDYVDRGYYSVETVTLLVALKIRYPNRITILRGNHESRQITQVYGFYDE 150          
BLAST of CX287606 vs. ExPASy Swiss-Prot
Match: PP2A2_ARATH (Serine/threonine-protein phosphatase PP2A-2 catalytic subunit OS=Arabidopsis thaliana GN=PP2A2 PE=1 SV=1)

HSP 1 Score: 216.083 bits (549), Expect = 1.063e-55
Identity = 101/127 (79.53%), Postives = 115/127 (90.55%), Query Frame = 2
Query:  212 SHGNLDEQIAQLMQCKPLSEQEVRVLCEKAKEILMDESNVQPVKSPVTICGDIHGQFHDLAELFRIGGKCPDTNYLFMGDYVDRGYYSVETVTLLVSLKVRYPQRITILRGNHESRQITQVYGFYDE 592
            S+G+LD QI QLM+CKPLSE +VR LC++A+ IL++E NVQPVK PVT+CGDIHGQF+DL ELFRIGG  PDTNYLFMGDYVDRGYYSVETV+LLV+LKVRY  R+TILRGNHESRQITQVYGFYDE
Sbjct:    3 SNGDLDRQIEQLMECKPLSEADVRTLCDQARAILVEEYNVQPVKCPVTVCGDIHGQFYDLIELFRIGGNAPDTNYLFMGDYVDRGYYSVETVSLLVALKVRYRDRLTILRGNHESRQITQVYGFYDE 129          
BLAST of CX287606 vs. ExPASy Swiss-Prot
Match: PP2AB_BOVIN (Serine/threonine-protein phosphatase 2A catalytic subunit beta isoform OS=Bos taurus GN=PPP2CB PE=2 SV=1)

HSP 1 Score: 215.312 bits (547), Expect = 1.812e-55
Identity = 101/124 (81.45%), Postives = 112/124 (90.32%), Query Frame = 2
Query:  221 NLDEQIAQLMQCKPLSEQEVRVLCEKAKEILMDESNVQPVKSPVTICGDIHGQFHDLAELFRIGGKCPDTNYLFMGDYVDRGYYSVETVTLLVSLKVRYPQRITILRGNHESRQITQVYGFYDE 592
            +LD+ + QL +CK L+E +VR LCEKAKEIL  ESNVQ V+ PVT+CGD+HGQFHDL ELFRIGGK PDTNYLFMGDYVDRGYYSVETVTLLV+LKVRYP+RITILRGNHESRQITQVYGFYDE
Sbjct:    9 DLDQWVEQLNECKQLNENQVRTLCEKAKEILTKESNVQEVRCPVTVCGDVHGQFHDLMELFRIGGKSPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYPERITILRGNHESRQITQVYGFYDE 132          
BLAST of CX287606 vs. ExPASy Swiss-Prot
Match: PP2AB_RAT (Serine/threonine-protein phosphatase 2A catalytic subunit beta isoform OS=Rattus norvegicus GN=Ppp2cb PE=2 SV=1)

HSP 1 Score: 214.927 bits (546), Expect = 2.367e-55
Identity = 101/123 (82.11%), Postives = 111/123 (90.24%), Query Frame = 2
Query:  224 LDEQIAQLMQCKPLSEQEVRVLCEKAKEILMDESNVQPVKSPVTICGDIHGQFHDLAELFRIGGKCPDTNYLFMGDYVDRGYYSVETVTLLVSLKVRYPQRITILRGNHESRQITQVYGFYDE 592
            LD+ + QL +CK L+E +VR LCEKAKEIL  ESNVQ V+ PVT+CGD+HGQFHDL ELFRIGGK PDTNYLFMGDYVDRGYYSVETVTLLV+LKVRYP+RITILRGNHESRQITQVYGFYDE
Sbjct:   10 LDQWVEQLNECKQLNENQVRTLCEKAKEILTKESNVQEVRCPVTVCGDVHGQFHDLMELFRIGGKSPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYPERITILRGNHESRQITQVYGFYDE 132          
BLAST of CX287606 vs. ExPASy Swiss-Prot
Match: PP2AB_RABIT (Serine/threonine-protein phosphatase 2A catalytic subunit beta isoform OS=Oryctolagus cuniculus GN=PPP2CB PE=1 SV=1)

HSP 1 Score: 214.927 bits (546), Expect = 2.367e-55
Identity = 101/123 (82.11%), Postives = 111/123 (90.24%), Query Frame = 2
Query:  224 LDEQIAQLMQCKPLSEQEVRVLCEKAKEILMDESNVQPVKSPVTICGDIHGQFHDLAELFRIGGKCPDTNYLFMGDYVDRGYYSVETVTLLVSLKVRYPQRITILRGNHESRQITQVYGFYDE 592
            LD+ + QL +CK L+E +VR LCEKAKEIL  ESNVQ V+ PVT+CGD+HGQFHDL ELFRIGGK PDTNYLFMGDYVDRGYYSVETVTLLV+LKVRYP+RITILRGNHESRQITQVYGFYDE
Sbjct:   10 LDQWVEQLNECKQLNENQVRTLCEKAKEILTKESNVQEVRCPVTVCGDVHGQFHDLMELFRIGGKSPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYPERITILRGNHESRQITQVYGFYDE 132          
BLAST of CX287606 vs. ExPASy Swiss-Prot
Match: PP2AB_MOUSE (Serine/threonine-protein phosphatase 2A catalytic subunit beta isoform OS=Mus musculus GN=Ppp2cb PE=1 SV=1)

HSP 1 Score: 214.927 bits (546), Expect = 2.367e-55
Identity = 101/123 (82.11%), Postives = 111/123 (90.24%), Query Frame = 2
Query:  224 LDEQIAQLMQCKPLSEQEVRVLCEKAKEILMDESNVQPVKSPVTICGDIHGQFHDLAELFRIGGKCPDTNYLFMGDYVDRGYYSVETVTLLVSLKVRYPQRITILRGNHESRQITQVYGFYDE 592
            LD+ + QL +CK L+E +VR LCEKAKEIL  ESNVQ V+ PVT+CGD+HGQFHDL ELFRIGGK PDTNYLFMGDYVDRGYYSVETVTLLV+LKVRYP+RITILRGNHESRQITQVYGFYDE
Sbjct:   10 LDQWVEQLNECKQLNENQVRTLCEKAKEILTKESNVQEVRCPVTVCGDVHGQFHDLMELFRIGGKSPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYPERITILRGNHESRQITQVYGFYDE 132          
BLAST of CX287606 vs. ExPASy Swiss-Prot
Match: PP2AB_HUMAN (Serine/threonine-protein phosphatase 2A catalytic subunit beta isoform OS=Homo sapiens GN=PPP2CB PE=1 SV=1)

HSP 1 Score: 214.927 bits (546), Expect = 2.367e-55
Identity = 101/123 (82.11%), Postives = 111/123 (90.24%), Query Frame = 2
Query:  224 LDEQIAQLMQCKPLSEQEVRVLCEKAKEILMDESNVQPVKSPVTICGDIHGQFHDLAELFRIGGKCPDTNYLFMGDYVDRGYYSVETVTLLVSLKVRYPQRITILRGNHESRQITQVYGFYDE 592
            LD+ + QL +CK L+E +VR LCEKAKEIL  ESNVQ V+ PVT+CGD+HGQFHDL ELFRIGGK PDTNYLFMGDYVDRGYYSVETVTLLV+LKVRYP+RITILRGNHESRQITQVYGFYDE
Sbjct:   10 LDQWVEQLNECKQLNENQVRTLCEKAKEILTKESNVQEVRCPVTVCGDVHGQFHDLMELFRIGGKSPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYPERITILRGNHESRQITQVYGFYDE 132          
BLAST of CX287606 vs. ExPASy Swiss-Prot
Match: PP2AA_CHICK (Serine/threonine-protein phosphatase 2A catalytic subunit alpha isoform OS=Gallus gallus GN=PPP2CA PE=2 SV=1)

HSP 1 Score: 214.542 bits (545), Expect = 3.092e-55
Identity = 102/123 (82.93%), Postives = 111/123 (90.24%), Query Frame = 2
Query:  224 LDEQIAQLMQCKPLSEQEVRVLCEKAKEILMDESNVQPVKSPVTICGDIHGQFHDLAELFRIGGKCPDTNYLFMGDYVDRGYYSVETVTLLVSLKVRYPQRITILRGNHESRQITQVYGFYDE 592
            LD+ I QL +C+ LSE +VR LCEKAKEIL  ESNVQ V+ PVT+CGD+HGQFHDL ELFRIGGK PDTNYLFMGDYVDRGYYSVETVTLLV+LKVRYP+RITILRGNHESRQITQVYGFYDE
Sbjct:   10 LDQWIEQLNECRQLSESQVRSLCEKAKEILTKESNVQEVRCPVTVCGDVHGQFHDLMELFRIGGKSPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYPERITILRGNHESRQITQVYGFYDE 132          
The following BLAST results are available for this feature:
BLAST of CX287606 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 194
Match NameE-valueIdentityDescription
PP2A3_ORYSJ2.141e-5681.25Serine/threonine-protein phosphatase PP2A-3 cataly... [more]
PP2A3_ORYSI2.141e-5681.25Serine/threonine-protein phosphatase PP2A-3 cataly... [more]
PP2A1_NEUCR6.229e-5682.11Serine/threonine-protein phosphatase PP2A catalyti... [more]
PP2A2_ARATH1.063e-5579.53Serine/threonine-protein phosphatase PP2A-2 cataly... [more]
PP2AB_BOVIN1.812e-5581.45Serine/threonine-protein phosphatase 2A catalytic ... [more]
PP2AB_RAT2.367e-5582.11Serine/threonine-protein phosphatase 2A catalytic ... [more]
PP2AB_RABIT2.367e-5582.11Serine/threonine-protein phosphatase 2A catalytic ... [more]
PP2AB_MOUSE2.367e-5582.11Serine/threonine-protein phosphatase 2A catalytic ... [more]
PP2AB_HUMAN2.367e-5582.11Serine/threonine-protein phosphatase 2A catalytic ... [more]
PP2AA_CHICK3.092e-5582.93Serine/threonine-protein phosphatase 2A catalytic ... [more]

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Properties
Property NameValue
Genbank descriptionC01011D05SK Veg1 Citrus clementina cDNA clone C01011D05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX287606 ID=CX287606; Name=CX287606; organism=Citrus clementina; type=EST; length=592bp
AATCACTGAAGCCTTCTCTCTTTTTTTTTTAAAATTTTTTTTGTTGAGAT
ACAAAATTGAATTTTGATTATAGGGTTTCGAAAAAATTAGGGTTTGTTTG
TTGAAATTTAGGGTTAGGGTTAGATTAAAAAGAGGAAAGTGAAGGGATCT
GAGTCTGCAAATTAAGAAGAAGAAGGACAAGAAAATGAGCTTGGATTCGG
TCCCTTCAAATTCACATGGAAATCTCGACGAGCAGATTGCTCAGCTTATG
CAGTGCAAGCCCTTATCGGAACAAGAGGTTAGAGTGTTATGCGAAAAGGC
CAAGGAGATATTGATGGATGAAAGTAATGTCCAGCCTGTAAAAAGTCCTG
TTACAATTTGTGGTGATATTCATGGACAATTTCATGATCTTGCAGAGCTT
TTCCGCATTGGAGGAAAGTGTCCAGATACAAACTACTTGTTCATGGGAGA
TTATGTTGACCGTGGTTACTATTCAGTAGAAACTGTTACGCTATTGGTAT
CTCTGAAAGTGCGTTATCCTCAAAGGATTACTATTCTAAGGGGGAATCAT
GAAAGTCGTCAGATTACTCAGGTCTATGGATTCTATGATGAG
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