CX287606

Overview
NameCX287606
Unique NameCX287606
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length592
Libraries
Library NameType
Veg1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX287606 vs. ExPASy Swiss-Prot
Match: PP2A1_SCHPO (Minor serine/threonine-protein phosphatase PP2A-1 catalytic subunit OS=Schizosaccharomyces pombe GN=ppa1 PE=2 SV=1)

HSP 1 Score: 201.445 bits (511), Expect = 2.708e-51
Identity = 94/129 (72.87%), Postives = 109/129 (84.50%), Query Frame = 2
Query:  206 SNSHGNLDEQIAQLMQCKPLSEQEVRVLCEKAKEILMDESNVQPVKSPVTICGDIHGQFHDLAELFRIGGKCPDTNYLFMGDYVDRGYYSVETVTLLVSLKVRYPQRITILRGNHESRQITQVYGFYDE 592
            S   G +D  I QL +C+PLSE++V  +C+ AKE+L  ESNVQ V+ PVT+CGDIHGQFHDL ELF IGG  PDTNYLFMGDYVDRGY+SVETV+LL++ K+RYPQRITILRGNHESRQITQVYGFYDE
Sbjct:    4 SGKIGEVDRWIEQLSRCEPLSEEDVIQMCDLAKEVLSVESNVQSVRCPVTVCGDIHGQFHDLMELFNIGGPSPDTNYLFMGDYVDRGYHSVETVSLLIAFKIRYPQRITILRGNHESRQITQVYGFYDE 132          
BLAST of CX287606 vs. ExPASy Swiss-Prot
Match: PP2A2_YEAST (Serine/threonine-protein phosphatase PP2A-2 catalytic subunit OS=Saccharomyces cerevisiae GN=PPH22 PE=1 SV=1)

HSP 1 Score: 198.364 bits (503), Expect = 2.293e-50
Identity = 91/123 (73.98%), Postives = 105/123 (85.37%), Query Frame = 2
Query:  224 LDEQIAQLMQCKPLSEQEVRVLCEKAKEILMDESNVQPVKSPVTICGDIHGQFHDLAELFRIGGKCPDTNYLFMGDYVDRGYYSVETVTLLVSLKVRYPQRITILRGNHESRQITQVYGFYDE 592
            LD+ I  L +C+PLSE +V  LC+ A ++L  E NV+P+  PVTICGD+HGQFHDL ELF+IGG CPDTNYLFMGDYVDRGYYSVETV+ LV++KVRYP RITILRGNHESRQITQVYGFYDE
Sbjct:   78 LDQWIEHLSKCEPLSEDDVARLCKMAVDVLQFEENVKPINVPVTICGDVHGQFHDLLELFKIGGPCPDTNYLFMGDYVDRGYYSVETVSYLVAMKVRYPHRITILRGNHESRQITQVYGFYDE 200          
BLAST of CX287606 vs. ExPASy Swiss-Prot
Match: PP2A1_YEAST (Serine/threonine-protein phosphatase PP2A-1 catalytic subunit OS=Saccharomyces cerevisiae GN=PPH21 PE=1 SV=1)

HSP 1 Score: 198.364 bits (503), Expect = 2.293e-50
Identity = 91/123 (73.98%), Postives = 105/123 (85.37%), Query Frame = 2
Query:  224 LDEQIAQLMQCKPLSEQEVRVLCEKAKEILMDESNVQPVKSPVTICGDIHGQFHDLAELFRIGGKCPDTNYLFMGDYVDRGYYSVETVTLLVSLKVRYPQRITILRGNHESRQITQVYGFYDE 592
            LD+ I  L +C+PLSE +V  LC+ A ++L  E NV+P+  PVTICGD+HGQFHDL ELF+IGG CPDTNYLFMGDYVDRGYYSVETV+ LV++KVRYP RITILRGNHESRQITQVYGFYDE
Sbjct:   70 LDQWIEHLSKCEPLSEDDVARLCKMAVDVLQFEENVKPINVPVTICGDVHGQFHDLLELFKIGGPCPDTNYLFMGDYVDRGYYSVETVSYLVAMKVRYPHRITILRGNHESRQITQVYGFYDE 192          
BLAST of CX287606 vs. ExPASy Swiss-Prot
Match: PP4C_RABIT (Serine/threonine-protein phosphatase 4 catalytic subunit OS=Oryctolagus cuniculus GN=PPP4C PE=1 SV=2)

HSP 1 Score: 197.208 bits (500), Expect = 5.108e-50
Identity = 90/124 (72.58%), Postives = 109/124 (87.90%), Query Frame = 2
Query:  221 NLDEQIAQLMQCKPLSEQEVRVLCEKAKEILMDESNVQPVKSPVTICGDIHGQFHDLAELFRIGGKCPDTNYLFMGDYVDRGYYSVETVTLLVSLKVRYPQRITILRGNHESRQITQVYGFYDE 592
            +LD QI QL++C+ + E EV+ LC KA+EIL++ESNVQ V SPVT+CGDIHGQF+DL ELFR+GG  P+TNYLFMGD+VDRG+YSVET  LL++LKVRYP RIT++RGNHESRQITQVYGFYDE
Sbjct:    6 DLDRQIEQLLRCELIKESEVKALCAKAREILVEESNVQRVDSPVTVCGDIHGQFYDLKELFRVGGDVPETNYLFMGDFVDRGFYSVETFLLLLALKVRYPDRITLIRGNHESRQITQVYGFYDE 129          
BLAST of CX287606 vs. ExPASy Swiss-Prot
Match: PP4C_DICDI (Serine/threonine-protein phosphatase 4 catalytic subunit OS=Dictyostelium discoideum GN=ppp4c PE=1 SV=1)

HSP 1 Score: 197.208 bits (500), Expect = 5.108e-50
Identity = 90/124 (72.58%), Postives = 107/124 (86.29%), Query Frame = 2
Query:  221 NLDEQIAQLMQCKPLSEQEVRVLCEKAKEILMDESNVQPVKSPVTICGDIHGQFHDLAELFRIGGKCPDTNYLFMGDYVDRGYYSVETVTLLVSLKVRYPQRITILRGNHESRQITQVYGFYDE 592
            +LD QI QL +C+ + E EVR LC KA+EIL++E NVQ V SPVTICGDIHGQF+DL ELF++GG CP TNYLFMGD+VDRG+YSVET  LL++LKVRYP RIT++RGNHESRQITQVYGFY+E
Sbjct:    4 DLDRQIEQLKRCEIIKESEVRALCSKAREILLEEGNVQRVDSPVTICGDIHGQFYDLKELFKVGGDCPQTNYLFMGDFVDRGFYSVETFLLLLALKVRYPDRITLIRGNHESRQITQVYGFYEE 127          
BLAST of CX287606 vs. ExPASy Swiss-Prot
Match: PPX4_PARTE (Serine/threonine-protein phosphatase PP-X homolog 4 OS=Paramecium tetraurelia GN=Ppx4 PE=3 SV=1)

HSP 1 Score: 196.823 bits (499), Expect = 6.671e-50
Identity = 91/127 (71.65%), Postives = 109/127 (85.83%), Query Frame = 2
Query:  212 SHGNLDEQIAQLMQCKPLSEQEVRVLCEKAKEILMDESNVQPVKSPVTICGDIHGQFHDLAELFRIGGKCPDTNYLFMGDYVDRGYYSVETVTLLVSLKVRYPQRITILRGNHESRQITQVYGFYDE 592
            S  +LD QIAQL  C+ ++E EV+ LC KA+EIL++ESNVQ V +PVTICGDIHGQF DL ELF++GG CPDTNYLF+GD+VDRG+ SVET  LL++LKVRYP RIT++RGNHESRQITQVYGFYDE
Sbjct:    2 SQSDLDRQIAQLRNCENITEGEVKALCTKAREILVEESNVQRVDAPVTICGDIHGQFFDLMELFKVGGDCPDTNYLFLGDFVDRGFNSVETFLLLLALKVRYPDRITLIRGNHESRQITQVYGFYDE 128          
BLAST of CX287606 vs. ExPASy Swiss-Prot
Match: PPX3_PARTE (Serine/threonine-protein phosphatase PP-X homolog 3 OS=Paramecium tetraurelia GN=Ppx3 PE=3 SV=1)

HSP 1 Score: 196.823 bits (499), Expect = 6.671e-50
Identity = 91/127 (71.65%), Postives = 109/127 (85.83%), Query Frame = 2
Query:  212 SHGNLDEQIAQLMQCKPLSEQEVRVLCEKAKEILMDESNVQPVKSPVTICGDIHGQFHDLAELFRIGGKCPDTNYLFMGDYVDRGYYSVETVTLLVSLKVRYPQRITILRGNHESRQITQVYGFYDE 592
            S  +LD QIAQL  C+ ++E EV+ LC KA+EIL++ESNVQ V +PVTICGDIHGQF DL ELF++GG CPDTNYLF+GD+VDRG+ SVET  LL++LKVRYP RIT++RGNHESRQITQVYGFYDE
Sbjct:    2 SQSDLDRQIAQLRNCENITEGEVKALCTKAREILVEESNVQRVDAPVTICGDIHGQFFDLMELFKVGGDCPDTNYLFLGDFVDRGFNSVETFLLLLALKVRYPDRITLIRGNHESRQITQVYGFYDE 128          
BLAST of CX287606 vs. ExPASy Swiss-Prot
Match: PP4C_XENTR (Serine/threonine-protein phosphatase 4 catalytic subunit OS=Xenopus tropicalis GN=ppp4c PE=2 SV=1)

HSP 1 Score: 196.052 bits (497), Expect = 1.138e-49
Identity = 90/124 (72.58%), Postives = 108/124 (87.10%), Query Frame = 2
Query:  221 NLDEQIAQLMQCKPLSEQEVRVLCEKAKEILMDESNVQPVKSPVTICGDIHGQFHDLAELFRIGGKCPDTNYLFMGDYVDRGYYSVETVTLLVSLKVRYPQRITILRGNHESRQITQVYGFYDE 592
            +LD QI QL +C+ + E EV+ LC KA+EIL++ESNVQ V SPVT+CGDIHGQF+DL ELFR+GG  P+TNYLFMGD+VDRG+YSVET  LL++LKVRYP RIT++RGNHESRQITQVYGFYDE
Sbjct:    6 DLDRQIEQLRRCELIKESEVKALCAKAREILVEESNVQRVDSPVTVCGDIHGQFYDLKELFRVGGDVPETNYLFMGDFVDRGFYSVETFLLLLALKVRYPDRITLIRGNHESRQITQVYGFYDE 129          
BLAST of CX287606 vs. ExPASy Swiss-Prot
Match: PP4C_XENLA (Serine/threonine-protein phosphatase 4 catalytic subunit OS=Xenopus laevis GN=ppp4c PE=2 SV=1)

HSP 1 Score: 196.052 bits (497), Expect = 1.138e-49
Identity = 90/124 (72.58%), Postives = 108/124 (87.10%), Query Frame = 2
Query:  221 NLDEQIAQLMQCKPLSEQEVRVLCEKAKEILMDESNVQPVKSPVTICGDIHGQFHDLAELFRIGGKCPDTNYLFMGDYVDRGYYSVETVTLLVSLKVRYPQRITILRGNHESRQITQVYGFYDE 592
            +LD QI QL +C+ + E EV+ LC KA+EIL++ESNVQ V SPVT+CGDIHGQF+DL ELFR+GG  P+TNYLFMGD+VDRG+YSVET  LL++LKVRYP RIT++RGNHESRQITQVYGFYDE
Sbjct:    6 DLDRQIEQLRRCELIKESEVKALCAKAREILVEESNVQRVDSPVTVCGDIHGQFYDLKELFRVGGDVPETNYLFMGDFVDRGFYSVETFLLLLALKVRYPDRITLIRGNHESRQITQVYGFYDE 129          
BLAST of CX287606 vs. ExPASy Swiss-Prot
Match: PP4C_RAT (Serine/threonine-protein phosphatase 4 catalytic subunit OS=Rattus norvegicus GN=Ppp4c PE=1 SV=1)

HSP 1 Score: 196.052 bits (497), Expect = 1.138e-49
Identity = 90/124 (72.58%), Postives = 108/124 (87.10%), Query Frame = 2
Query:  221 NLDEQIAQLMQCKPLSEQEVRVLCEKAKEILMDESNVQPVKSPVTICGDIHGQFHDLAELFRIGGKCPDTNYLFMGDYVDRGYYSVETVTLLVSLKVRYPQRITILRGNHESRQITQVYGFYDE 592
            +LD QI QL +C+ + E EV+ LC KA+EIL++ESNVQ V SPVT+CGDIHGQF+DL ELFR+GG  P+TNYLFMGD+VDRG+YSVET  LL++LKVRYP RIT++RGNHESRQITQVYGFYDE
Sbjct:    6 DLDRQIEQLRRCELIKESEVKALCAKAREILVEESNVQRVDSPVTVCGDIHGQFYDLKELFRVGGDVPETNYLFMGDFVDRGFYSVETFLLLLALKVRYPDRITLIRGNHESRQITQVYGFYDE 129          
The following BLAST results are available for this feature:
BLAST of CX287606 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 194
Match NameE-valueIdentityDescription
PP2A1_SCHPO2.708e-5172.87Minor serine/threonine-protein phosphatase PP2A-1 ... [more]
PP2A2_YEAST2.293e-5073.98Serine/threonine-protein phosphatase PP2A-2 cataly... [more]
PP2A1_YEAST2.293e-5073.98Serine/threonine-protein phosphatase PP2A-1 cataly... [more]
PP4C_RABIT5.108e-5072.58Serine/threonine-protein phosphatase 4 catalytic s... [more]
PP4C_DICDI5.108e-5072.58Serine/threonine-protein phosphatase 4 catalytic s... [more]
PPX4_PARTE6.671e-5071.65Serine/threonine-protein phosphatase PP-X homolog ... [more]
PPX3_PARTE6.671e-5071.65Serine/threonine-protein phosphatase PP-X homolog ... [more]
PP4C_XENTR1.138e-4972.58Serine/threonine-protein phosphatase 4 catalytic s... [more]
PP4C_XENLA1.138e-4972.58Serine/threonine-protein phosphatase 4 catalytic s... [more]
PP4C_RAT1.138e-4972.58Serine/threonine-protein phosphatase 4 catalytic s... [more]

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Properties
Property NameValue
Genbank descriptionC01011D05SK Veg1 Citrus clementina cDNA clone C01011D05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX287606 ID=CX287606; Name=CX287606; organism=Citrus clementina; type=EST; length=592bp
AATCACTGAAGCCTTCTCTCTTTTTTTTTTAAAATTTTTTTTGTTGAGAT
ACAAAATTGAATTTTGATTATAGGGTTTCGAAAAAATTAGGGTTTGTTTG
TTGAAATTTAGGGTTAGGGTTAGATTAAAAAGAGGAAAGTGAAGGGATCT
GAGTCTGCAAATTAAGAAGAAGAAGGACAAGAAAATGAGCTTGGATTCGG
TCCCTTCAAATTCACATGGAAATCTCGACGAGCAGATTGCTCAGCTTATG
CAGTGCAAGCCCTTATCGGAACAAGAGGTTAGAGTGTTATGCGAAAAGGC
CAAGGAGATATTGATGGATGAAAGTAATGTCCAGCCTGTAAAAAGTCCTG
TTACAATTTGTGGTGATATTCATGGACAATTTCATGATCTTGCAGAGCTT
TTCCGCATTGGAGGAAAGTGTCCAGATACAAACTACTTGTTCATGGGAGA
TTATGTTGACCGTGGTTACTATTCAGTAGAAACTGTTACGCTATTGGTAT
CTCTGAAAGTGCGTTATCCTCAAAGGATTACTATTCTAAGGGGGAATCAT
GAAAGTCGTCAGATTACTCAGGTCTATGGATTCTATGATGAG
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