CX287606

Overview
NameCX287606
Unique NameCX287606
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length592
Libraries
Library NameType
Veg1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX287606 vs. ExPASy Swiss-Prot
Match: PP4C_PONAB (Serine/threonine-protein phosphatase 4 catalytic subunit OS=Pongo abelii GN=PPP4C PE=2 SV=1)

HSP 1 Score: 196.052 bits (497), Expect = 1.138e-49
Identity = 90/124 (72.58%), Postives = 108/124 (87.10%), Query Frame = 2
Query:  221 NLDEQIAQLMQCKPLSEQEVRVLCEKAKEILMDESNVQPVKSPVTICGDIHGQFHDLAELFRIGGKCPDTNYLFMGDYVDRGYYSVETVTLLVSLKVRYPQRITILRGNHESRQITQVYGFYDE 592
            +LD QI QL +C+ + E EV+ LC KA+EIL++ESNVQ V SPVT+CGDIHGQF+DL ELFR+GG  P+TNYLFMGD+VDRG+YSVET  LL++LKVRYP RIT++RGNHESRQITQVYGFYDE
Sbjct:    6 DLDRQIEQLRRCELIKESEVKALCAKAREILVEESNVQRVDSPVTVCGDIHGQFYDLKELFRVGGDVPETNYLFMGDFVDRGFYSVETFLLLLALKVRYPDRITLIRGNHESRQITQVYGFYDE 129          
BLAST of CX287606 vs. ExPASy Swiss-Prot
Match: PP4C_MOUSE (Serine/threonine-protein phosphatase 4 catalytic subunit OS=Mus musculus GN=Ppp4c PE=1 SV=2)

HSP 1 Score: 196.052 bits (497), Expect = 1.138e-49
Identity = 90/124 (72.58%), Postives = 108/124 (87.10%), Query Frame = 2
Query:  221 NLDEQIAQLMQCKPLSEQEVRVLCEKAKEILMDESNVQPVKSPVTICGDIHGQFHDLAELFRIGGKCPDTNYLFMGDYVDRGYYSVETVTLLVSLKVRYPQRITILRGNHESRQITQVYGFYDE 592
            +LD QI QL +C+ + E EV+ LC KA+EIL++ESNVQ V SPVT+CGDIHGQF+DL ELFR+GG  P+TNYLFMGD+VDRG+YSVET  LL++LKVRYP RIT++RGNHESRQITQVYGFYDE
Sbjct:    6 DLDRQIEQLRRCELIKESEVKALCAKAREILVEESNVQRVDSPVTVCGDIHGQFYDLKELFRVGGDVPETNYLFMGDFVDRGFYSVETFLLLLALKVRYPDRITLIRGNHESRQITQVYGFYDE 129          
BLAST of CX287606 vs. ExPASy Swiss-Prot
Match: PP4C_HUMAN (Serine/threonine-protein phosphatase 4 catalytic subunit OS=Homo sapiens GN=PPP4C PE=1 SV=1)

HSP 1 Score: 196.052 bits (497), Expect = 1.138e-49
Identity = 90/124 (72.58%), Postives = 108/124 (87.10%), Query Frame = 2
Query:  221 NLDEQIAQLMQCKPLSEQEVRVLCEKAKEILMDESNVQPVKSPVTICGDIHGQFHDLAELFRIGGKCPDTNYLFMGDYVDRGYYSVETVTLLVSLKVRYPQRITILRGNHESRQITQVYGFYDE 592
            +LD QI QL +C+ + E EV+ LC KA+EIL++ESNVQ V SPVT+CGDIHGQF+DL ELFR+GG  P+TNYLFMGD+VDRG+YSVET  LL++LKVRYP RIT++RGNHESRQITQVYGFYDE
Sbjct:    6 DLDRQIEQLRRCELIKESEVKALCAKAREILVEESNVQRVDSPVTVCGDIHGQFYDLKELFRVGGDVPETNYLFMGDFVDRGFYSVETFLLLLALKVRYPDRITLIRGNHESRQITQVYGFYDE 129          
BLAST of CX287606 vs. ExPASy Swiss-Prot
Match: PP4C_BOVIN (Serine/threonine-protein phosphatase 4 catalytic subunit OS=Bos taurus GN=PPP4C PE=2 SV=1)

HSP 1 Score: 196.052 bits (497), Expect = 1.138e-49
Identity = 90/124 (72.58%), Postives = 108/124 (87.10%), Query Frame = 2
Query:  221 NLDEQIAQLMQCKPLSEQEVRVLCEKAKEILMDESNVQPVKSPVTICGDIHGQFHDLAELFRIGGKCPDTNYLFMGDYVDRGYYSVETVTLLVSLKVRYPQRITILRGNHESRQITQVYGFYDE 592
            +LD QI QL +C+ + E EV+ LC KA+EIL++ESNVQ V SPVT+CGDIHGQF+DL ELFR+GG  P+TNYLFMGD+VDRG+YSVET  LL++LKVRYP RIT++RGNHESRQITQVYGFYDE
Sbjct:    6 DLDRQIEQLRRCELIKESEVKALCAKAREILVEESNVQRVDSPVTVCGDIHGQFYDLKELFRVGGDVPETNYLFMGDFVDRGFYSVETFLLLLALKVRYPDRITLIRGNHESRQITQVYGFYDE 129          
BLAST of CX287606 vs. ExPASy Swiss-Prot
Match: PP4CB_DANRE (Serine/threonine-protein phosphatase 4 catalytic subunit B OS=Danio rerio GN=ppp4cb PE=2 SV=1)

HSP 1 Score: 195.667 bits (496), Expect = 1.486e-49
Identity = 90/124 (72.58%), Postives = 108/124 (87.10%), Query Frame = 2
Query:  221 NLDEQIAQLMQCKPLSEQEVRVLCEKAKEILMDESNVQPVKSPVTICGDIHGQFHDLAELFRIGGKCPDTNYLFMGDYVDRGYYSVETVTLLVSLKVRYPQRITILRGNHESRQITQVYGFYDE 592
            +LD QI QL +C+ + E EV+ LC KA+EIL++ESNVQ V SPVT+CGDIHGQF+DL ELFR+GG  P+TNYLFMGD+VDRG+YSVET  LL++LKVRYP RIT++RGNHESRQITQVYGFYDE
Sbjct:    6 DLDRQIDQLRRCELIKENEVKALCAKAREILVEESNVQRVDSPVTVCGDIHGQFYDLKELFRVGGDVPETNYLFMGDFVDRGFYSVETFLLLLALKVRYPDRITLIRGNHESRQITQVYGFYDE 129          
BLAST of CX287606 vs. ExPASy Swiss-Prot
Match: PP4CA_DANRE (Serine/threonine-protein phosphatase 4 catalytic subunit A OS=Danio rerio GN=ppp4ca PE=2 SV=1)

HSP 1 Score: 195.667 bits (496), Expect = 1.486e-49
Identity = 89/124 (71.77%), Postives = 109/124 (87.90%), Query Frame = 2
Query:  221 NLDEQIAQLMQCKPLSEQEVRVLCEKAKEILMDESNVQPVKSPVTICGDIHGQFHDLAELFRIGGKCPDTNYLFMGDYVDRGYYSVETVTLLVSLKVRYPQRITILRGNHESRQITQVYGFYDE 592
            +LD QI QL +C+ + E EV+ LC KA+EIL++ESNVQ V SPVT+CGDIHGQF+DL ELFR+GG+ P+TNYLFMGD+VDRG+YSVET  LL++LKVRYP RIT++RGNHESRQITQVYGF+DE
Sbjct:   10 DLDRQIEQLRRCELIKENEVKALCAKAREILVEESNVQSVDSPVTVCGDIHGQFYDLKELFRVGGEVPETNYLFMGDFVDRGFYSVETFLLLLALKVRYPDRITLIRGNHESRQITQVYGFFDE 133          
BLAST of CX287606 vs. ExPASy Swiss-Prot
Match: PPX2_ARATH (Serine/threonine-protein phosphatase PP-X isozyme 2 OS=Arabidopsis thaliana GN=PPX2 PE=2 SV=2)

HSP 1 Score: 194.897 bits (494), Expect = 2.535e-49
Identity = 89/124 (71.77%), Postives = 108/124 (87.10%), Query Frame = 2
Query:  221 NLDEQIAQLMQCKPLSEQEVRVLCEKAKEILMDESNVQPVKSPVTICGDIHGQFHDLAELFRIGGKCPDTNYLFMGDYVDRGYYSVETVTLLVSLKVRYPQRITILRGNHESRQITQVYGFYDE 592
            +LD+QI QL +C+ L E EV+ LC KA EIL++ESNVQ V +PVTICGDIHGQF+D+ ELF++GG CP TNYLF+GD+VDRG+YSVET  LL++LKVRYP RIT++RGNHESRQITQVYGFYDE
Sbjct:    3 DLDKQIEQLKRCEALKESEVKALCLKAMEILVEESNVQRVDAPVTICGDIHGQFYDMKELFKVGGDCPKTNYLFLGDFVDRGFYSVETFLLLLALKVRYPDRITLIRGNHESRQITQVYGFYDE 126          
BLAST of CX287606 vs. ExPASy Swiss-Prot
Match: PP4C_DROME (Serine/threonine-protein phosphatase 4 catalytic subunit OS=Drosophila melanogaster GN=Pp4-19C PE=2 SV=1)

HSP 1 Score: 193.741 bits (491), Expect = 5.647e-49
Identity = 88/128 (68.75%), Postives = 108/128 (84.38%), Query Frame = 2
Query:  209 NSHGNLDEQIAQLMQCKPLSEQEVRVLCEKAKEILMDESNVQPVKSPVTICGDIHGQFHDLAELFRIGGKCPDTNYLFMGDYVDRGYYSVETVTLLVSLKVRYPQRITILRGNHESRQITQVYGFYDE 592
            + + +LD QI QL +C+ + E EV+ LC KA+EIL++E NVQ V SPVT+CGDIHGQF+DL ELF++GG  P+ NYLFMGD+VDRGYYSVET  LL++LKVRYP RIT++RGNHESRQITQVYGFYDE
Sbjct:    2 SDYSDLDRQIEQLKRCEIIKENEVKALCAKAREILVEEGNVQRVDSPVTVCGDIHGQFYDLKELFKVGGDVPEKNYLFMGDFVDRGYYSVETFLLLLALKVRYPDRITLIRGNHESRQITQVYGFYDE 129          
BLAST of CX287606 vs. ExPASy Swiss-Prot
Match: PPP6_DICDI (Serine/threonine-protein phosphatase 6 catalytic subunit OS=Dictyostelium discoideum GN=ppp6c PE=2 SV=2)

HSP 1 Score: 193.356 bits (490), Expect = 7.376e-49
Identity = 87/123 (70.73%), Postives = 106/123 (86.18%), Query Frame = 2
Query:  224 LDEQIAQLMQCKPLSEQEVRVLCEKAKEILMDESNVQPVKSPVTICGDIHGQFHDLAELFRIGGKCPDTNYLFMGDYVDRGYYSVETVTLLVSLKVRYPQRITILRGNHESRQITQVYGFYDE 592
            LDE +    QCK L E +++ LCE+ KE+L++ESNVQPV+SPVTICGDIHGQF+DL ELF+ GG+ PDTNY+FMGD+VDRGYYS+ET T L++LK RYP +IT+LRGNHESRQITQVYGFYDE
Sbjct:    7 LDEWVETARQCKYLPENDLKKLCERVKELLLEESNVQPVRSPVTICGDIHGQFYDLLELFKTGGEVPDTNYVFMGDFVDRGYYSLETFTYLLALKARYPDKITLLRGNHESRQITQVYGFYDE 129          
BLAST of CX287606 vs. ExPASy Swiss-Prot
Match: PPE1_SCHPO (Serine/threonine-protein phosphatase ppe1 OS=Schizosaccharomyces pombe GN=ppe1 PE=1 SV=1)

HSP 1 Score: 189.504 bits (480), Expect = 1.065e-47
Identity = 85/124 (68.55%), Postives = 106/124 (85.48%), Query Frame = 2
Query:  221 NLDEQIAQLMQCKPLSEQEVRVLCEKAKEILMDESNVQPVKSPVTICGDIHGQFHDLAELFRIGGKCPDTNYLFMGDYVDRGYYSVETVTLLVSLKVRYPQRITILRGNHESRQITQVYGFYDE 592
            +LDE IA + +CK L E +++ LCE  K ILM+ESN+QPV++PVT+CGDIHGQF+DL ELFR+GG+ P TNY+FMGD+VDRGY+S+ET TL + LK RYP +IT+LRGNHESRQITQVYGFYDE
Sbjct:    3 DLDEWIATVRKCKYLPEHQLKRLCEMVKVILMEESNIQPVRTPVTVCGDIHGQFYDLLELFRVGGELPSTNYIFMGDFVDRGYFSLETFTLFMLLKARYPDKITLLRGNHESRQITQVYGFYDE 126          
The following BLAST results are available for this feature:
BLAST of CX287606 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 194
Match NameE-valueIdentityDescription
PP4C_PONAB1.138e-4972.58Serine/threonine-protein phosphatase 4 catalytic s... [more]
PP4C_MOUSE1.138e-4972.58Serine/threonine-protein phosphatase 4 catalytic s... [more]
PP4C_HUMAN1.138e-4972.58Serine/threonine-protein phosphatase 4 catalytic s... [more]
PP4C_BOVIN1.138e-4972.58Serine/threonine-protein phosphatase 4 catalytic s... [more]
PP4CB_DANRE1.486e-4972.58Serine/threonine-protein phosphatase 4 catalytic s... [more]
PP4CA_DANRE1.486e-4971.77Serine/threonine-protein phosphatase 4 catalytic s... [more]
PPX2_ARATH2.535e-4971.77Serine/threonine-protein phosphatase PP-X isozyme ... [more]
PP4C_DROME5.647e-4968.75Serine/threonine-protein phosphatase 4 catalytic s... [more]
PPP6_DICDI7.376e-4970.73Serine/threonine-protein phosphatase 6 catalytic s... [more]
PPE1_SCHPO1.065e-4768.55Serine/threonine-protein phosphatase ppe1 OS=Schiz... [more]

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Properties
Property NameValue
Genbank descriptionC01011D05SK Veg1 Citrus clementina cDNA clone C01011D05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX287606 ID=CX287606; Name=CX287606; organism=Citrus clementina; type=EST; length=592bp
AATCACTGAAGCCTTCTCTCTTTTTTTTTTAAAATTTTTTTTGTTGAGAT
ACAAAATTGAATTTTGATTATAGGGTTTCGAAAAAATTAGGGTTTGTTTG
TTGAAATTTAGGGTTAGGGTTAGATTAAAAAGAGGAAAGTGAAGGGATCT
GAGTCTGCAAATTAAGAAGAAGAAGGACAAGAAAATGAGCTTGGATTCGG
TCCCTTCAAATTCACATGGAAATCTCGACGAGCAGATTGCTCAGCTTATG
CAGTGCAAGCCCTTATCGGAACAAGAGGTTAGAGTGTTATGCGAAAAGGC
CAAGGAGATATTGATGGATGAAAGTAATGTCCAGCCTGTAAAAAGTCCTG
TTACAATTTGTGGTGATATTCATGGACAATTTCATGATCTTGCAGAGCTT
TTCCGCATTGGAGGAAAGTGTCCAGATACAAACTACTTGTTCATGGGAGA
TTATGTTGACCGTGGTTACTATTCAGTAGAAACTGTTACGCTATTGGTAT
CTCTGAAAGTGCGTTATCCTCAAAGGATTACTATTCTAAGGGGGAATCAT
GAAAGTCGTCAGATTACTCAGGTCTATGGATTCTATGATGAG
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