CX287609

Overview
NameCX287609
Unique NameCX287609
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length510
Libraries
Library NameType
Veg1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX287609 vs. ExPASy Swiss-Prot
Match: CDC28_YEAST (Cell division control protein 28 OS=Saccharomyces cerevisiae GN=CDC28 PE=1 SV=1)

HSP 1 Score: 166.777 bits (421), Expect = 5.287e-41
Identity = 75/120 (62.50%), Postives = 93/120 (77.50%), Query Frame = 1
Query:    1 RAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPGDSEIDELFKIFRVLGTPNEDTWPGVTSLPDFKSAFPKWPSKELGTVVRNLEPAGIDLLSKMLCMDPSRRITARSALEHEYFRD 360
            RAPE+LLG + YST VD WS+GCIFAEM N++P+F GDSEID++FKIFRVLGTPNE  WP +  LPDFK +FP+W  K+L  VV +L+P GIDLL K+L  DP  RI+AR A  H YF++
Sbjct:  178 RAPEVLLGGKQYSTGVDTWSIGCIFAEMCNRKPIFSGDSEIDQIFKIFRVLGTPNEAIWPDIVYLPDFKPSFPQWRRKDLSQVVPSLDPRGIDLLDKLLAYDPINRISARRAAIHPYFQE 297          
BLAST of CX287609 vs. ExPASy Swiss-Prot
Match: CDK2_RAT (Cell division protein kinase 2 OS=Rattus norvegicus GN=Cdk2 PE=2 SV=1)

HSP 1 Score: 166.392 bits (420), Expect = 6.905e-41
Identity = 76/121 (62.81%), Postives = 98/121 (80.99%), Query Frame = 1
Query:    1 RAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPGDSEIDELFKIFRVLGTPNEDTWPGVTSLPDFKSAFPKWPSKELGTVVRNLEPAGIDLLSKMLCMDPSRRITARSALEHEYFRDV 363
            RAPEILLG ++YST VD+WS+GCIFAEMV +R LFPGDSEID+LF+IFR LGTP+E  WPGVTS+PD+K +FPKW  ++   VV  L+  G  LLS+ML  DP++RI+A++AL H +F+DV
Sbjct:  169 RAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDV 289          
BLAST of CX287609 vs. ExPASy Swiss-Prot
Match: CDK2_MESAU (Cell division protein kinase 2 OS=Mesocricetus auratus GN=CDK2 PE=2 SV=1)

HSP 1 Score: 166.392 bits (420), Expect = 6.905e-41
Identity = 76/121 (62.81%), Postives = 98/121 (80.99%), Query Frame = 1
Query:    1 RAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPGDSEIDELFKIFRVLGTPNEDTWPGVTSLPDFKSAFPKWPSKELGTVVRNLEPAGIDLLSKMLCMDPSRRITARSALEHEYFRDV 363
            RAPEILLG ++YST VD+WS+GCIFAEMV +R LFPGDSEID+LF+IFR LGTP+E  WPGVTS+PD+K +FPKW  ++   VV  L+  G  LLS+ML  DP++RI+A++AL H +F+DV
Sbjct:  169 RAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDV 289          
BLAST of CX287609 vs. ExPASy Swiss-Prot
Match: CDK2_HUMAN (Cell division protein kinase 2 OS=Homo sapiens GN=CDK2 PE=1 SV=2)

HSP 1 Score: 166.392 bits (420), Expect = 6.905e-41
Identity = 76/121 (62.81%), Postives = 98/121 (80.99%), Query Frame = 1
Query:    1 RAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPGDSEIDELFKIFRVLGTPNEDTWPGVTSLPDFKSAFPKWPSKELGTVVRNLEPAGIDLLSKMLCMDPSRRITARSALEHEYFRDV 363
            RAPEILLG ++YST VD+WS+GCIFAEMV +R LFPGDSEID+LF+IFR LGTP+E  WPGVTS+PD+K +FPKW  ++   VV  L+  G  LLS+ML  DP++RI+A++AL H +F+DV
Sbjct:  169 RAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDV 289          
BLAST of CX287609 vs. ExPASy Swiss-Prot
Match: CDK2_CRIGR (Cell division protein kinase 2 OS=Cricetulus griseus GN=CDK2 PE=2 SV=1)

HSP 1 Score: 166.392 bits (420), Expect = 6.905e-41
Identity = 76/121 (62.81%), Postives = 98/121 (80.99%), Query Frame = 1
Query:    1 RAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPGDSEIDELFKIFRVLGTPNEDTWPGVTSLPDFKSAFPKWPSKELGTVVRNLEPAGIDLLSKMLCMDPSRRITARSALEHEYFRDV 363
            RAPEILLG ++YST VD+WS+GCIFAEMV +R LFPGDSEID+LF+IFR LGTP+E  WPGVTS+PD+K +FPKW  ++   VV  L+  G  LLS+ML  DP++RI+A++AL H +F+DV
Sbjct:  169 RAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDV 289          
BLAST of CX287609 vs. ExPASy Swiss-Prot
Match: CDK2_BOVIN (Cell division protein kinase 2 OS=Bos taurus GN=CDK2 PE=2 SV=1)

HSP 1 Score: 166.392 bits (420), Expect = 6.905e-41
Identity = 76/121 (62.81%), Postives = 98/121 (80.99%), Query Frame = 1
Query:    1 RAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPGDSEIDELFKIFRVLGTPNEDTWPGVTSLPDFKSAFPKWPSKELGTVVRNLEPAGIDLLSKMLCMDPSRRITARSALEHEYFRDV 363
            RAPEILLG ++YST VD+WS+GCIFAEMV +R LFPGDSEID+LF+IFR LGTP+E  WPGVTS+PD+K +FPKW  ++   VV  L+  G  LLS+ML  DP++RI+A++AL H +F+DV
Sbjct:  169 RAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDV 289          
BLAST of CX287609 vs. ExPASy Swiss-Prot
Match: CDC2_CHICK (Cell division control protein 2 homolog OS=Gallus gallus GN=CDC2 PE=1 SV=1)

HSP 1 Score: 166.392 bits (420), Expect = 6.905e-41
Identity = 75/122 (61.48%), Postives = 95/122 (77.87%), Query Frame = 1
Query:    1 RAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPGDSEIDELFKIFRVLGTPNEDTWPGVTSLPDFKSAFPKWPSKELGTVVRNLEPAGIDLLSKMLCMDPSRRITARSALEHEYFRDVE 366
            R+PE+LLGS  YSTPVD+WS+G IFAE+  ++PLF GDSEID+LF+IFR LGTPN D WP V SL D+K+ FPKW    LGT V+NL+  G+DLLSKML  DP++RI+ + AL H YF D++
Sbjct:  170 RSPEVLLGSALYSTPVDIWSIGTIFAELATKKPLFHGDSEIDQLFRIFRALGTPNNDVWPDVESLQDYKNTFPKWKPGSLGTHVQNLDEDGLDLLSKMLIYDPAKRISGKMALNHPYFDDLD 291          
BLAST of CX287609 vs. ExPASy Swiss-Prot
Match: CDC2_AJECA (Cell division control protein 2 OS=Ajellomyces capsulata GN=CDC2 PE=3 SV=1)

HSP 1 Score: 166.007 bits (419), Expect = 9.019e-41
Identity = 77/119 (64.71%), Postives = 95/119 (79.83%), Query Frame = 1
Query:    1 RAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPGDSEIDELFKIFRVLGTPNEDTWPGVTSLPDFKSAFPKWPSKELGTVVRNLEPAGIDLLSKMLCMDPSRRITARSALEHEYFR 357
            RAPEILLG R YST VD+WSVG IFAEM  ++PLFPGDSEIDE+FKIF++LGTP+E+TWPGVTS PDFK++FPKW  ++   +V  LE  G+DLL  ML  DP+RRI+A+ A  H YF+
Sbjct:  190 RAPEILLGGRQYSTGVDMWSVGAIFAEMCTRKPLFPGDSEIDEIFKIFKLLGTPDENTWPGVTSFPDFKASFPKWKREDTRKLVPGLERNGLDLLDAMLEYDPARRISAKQACMHPYFQ 308          
BLAST of CX287609 vs. ExPASy Swiss-Prot
Match: CDC2_DROME (Cell division control protein 2 homolog OS=Drosophila melanogaster GN=cdc2 PE=1 SV=1)

HSP 1 Score: 165.236 bits (417), Expect = 1.538e-40
Identity = 73/118 (61.86%), Postives = 92/118 (77.97%), Query Frame = 1
Query:    1 RAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPGDSEIDELFKIFRVLGTPNEDTWPGVTSLPDFKSAFPKWPSKELGTVVRNLEPAGIDLLSKMLCMDPSRRITARSALEHEYF 354
            RAPE+LLGS  YS PVD+WS+GCIFAEM  ++PLF GDSEID+LF++FR+L TP ED WPGVTSLPD+K+ FP W + +L   ++NL+  GIDL+ KML  DP  RI+A+  LEH YF
Sbjct:  170 RAPEVLLGSPRYSCPVDIWSIGCIFAEMATRKPLFQGDSEIDQLFRMFRILKTPTEDIWPGVTSLPDYKNTFPCWSTNQLTNQLKNLDANGIDLIQKMLIYDPVHRISAKDILEHPYF 287          
BLAST of CX287609 vs. ExPASy Swiss-Prot
Match: CDC2_BOVIN (Cell division control protein 2 homolog OS=Bos taurus GN=CDC2 PE=2 SV=2)

HSP 1 Score: 164.081 bits (414), Expect = 3.427e-40
Identity = 73/122 (59.84%), Postives = 94/122 (77.05%), Query Frame = 1
Query:    1 RAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPGDSEIDELFKIFRVLGTPNEDTWPGVTSLPDFKSAFPKWPSKELGTVVRNLEPAGIDLLSKMLCMDPSRRITARSALEHEYFRDVE 366
            R+PE+LLGS  YSTPVD+WS+G IFAE+  ++PLF GDSEID+LF+IFR LGTPN + WP V SL D+KS FPKW    L + V+NL+  G+DLLSKML  DP++RI+ + AL H YF D++
Sbjct:  170 RSPEVLLGSARYSTPVDIWSIGTIFAELATKKPLFHGDSEIDQLFRIFRALGTPNNEVWPEVESLQDYKSTFPKWKPGSLASHVKNLDENGLDLLSKMLIYDPAKRISGKMALNHPYFNDLD 291          
The following BLAST results are available for this feature:
BLAST of CX287609 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
CDC28_YEAST5.287e-4162.50Cell division control protein 28 OS=Saccharomyces ... [more]
CDK2_RAT6.905e-4162.81Cell division protein kinase 2 OS=Rattus norvegicu... [more]
CDK2_MESAU6.905e-4162.81Cell division protein kinase 2 OS=Mesocricetus aur... [more]
CDK2_HUMAN6.905e-4162.81Cell division protein kinase 2 OS=Homo sapiens GN=... [more]
CDK2_CRIGR6.905e-4162.81Cell division protein kinase 2 OS=Cricetulus grise... [more]
CDK2_BOVIN6.905e-4162.81Cell division protein kinase 2 OS=Bos taurus GN=CD... [more]
CDC2_CHICK6.905e-4161.48Cell division control protein 2 homolog OS=Gallus ... [more]
CDC2_AJECA9.019e-4164.71Cell division control protein 2 OS=Ajellomyces cap... [more]
CDC2_DROME1.538e-4061.86Cell division control protein 2 homolog OS=Drosoph... [more]
CDC2_BOVIN3.427e-4059.84Cell division control protein 2 homolog OS=Bos tau... [more]

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Properties
Property NameValue
Genbank descriptionC01011D08SK Veg1 Citrus clementina cDNA clone C01011D08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX287609 ID=CX287609; Name=CX287609; organism=Citrus clementina; type=EST; length=510bp
AGAGCACCTGAAATATTACTAGGATCTCGCCATTACTCTACTCCAGTTGA
TGTGTGGTCGGTGGGATGTATATTTGCTGAGATGGTGAACCAGCGGCCAT
TGTTTCCAGGAGACTCTGAGATTGATGAGTTATTCAAGATCTTCAGAGTC
TTGGGAACACCTAATGAGGACACATGGCCTGGAGTGACTTCATTGCCTGA
CTTTAAATCTGCCTTTCCTAAATGGCCTTCTAAGGAGTTGGGGACTGTTG
TTCGAAATCTTGAGCCAGCTGGCATTGATCTCCTTTCTAAAATGCTCTGC
ATGGATCCAAGCAGAAGAATTACTGCCAGAAGTGCTCTAGAACATGAATA
CTTCAGGGACGTCGAATTTGTACCCTAATATCTGTTGTATATGCTATTAG
AGTGTTGACATTATTGTGAAGCCTTTGGTTTTGATTGTTTGCGAAATTTG
CCGACTGTCTTTACTTGCAGTTTTACTGAAAAGTCTTACTACATGGAATG
GCTTTTTACA
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