CX287609

Overview
NameCX287609
Unique NameCX287609
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length510
Libraries
Library NameType
Veg1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX287609 vs. ExPASy Swiss-Prot
Match: CKB21_ORYSJ (Cyclin-dependent kinase B2-1 OS=Oryza sativa subsp. japonica GN=CDKB2-1 PE=1 SV=1)

HSP 1 Score: 152.525 bits (384), Expect = 1.032e-36
Identity = 67/121 (55.37%), Postives = 91/121 (75.21%), Query Frame = 1
Query:    1 RAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPGDSEIDELFKIFRVLGTPNEDTWPGVTSLPDFKSAFPKWPSKELGTVVRNLEPAGIDLLSKMLCMDPSRRITARSALEHEYFRDV 363
            RAPE+LLG+ HYSTPVD+WSVGCIFAE+   +PLF GDSE+ +L  IF++LGTPNE  WPGV+ LP++   +P+W   ++  +V  L+   +DLL KML  +PS+RI+A+ A+EH YF DV
Sbjct:  202 RAPEVLLGAAHYSTPVDIWSVGCIFAELATNQPLFAGDSEVQQLLHIFKLLGTPNEQVWPGVSKLPNWHE-YPQWNPSKVSDLVHGLDADALDLLEKMLQYEPSKRISAKKAMEHPYFNDV 321          
BLAST of CX287609 vs. ExPASy Swiss-Prot
Match: CKB11_ARATH (Cyclin-dependent kinase B1-1 OS=Arabidopsis thaliana GN=CDKB1-1 PE=1 SV=2)

HSP 1 Score: 150.984 bits (380), Expect = 3.002e-36
Identity = 70/122 (57.38%), Postives = 93/122 (76.23%), Query Frame = 1
Query:    1 RAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPGDSEIDELFKIFRVLGTPNEDTWPGVTSLPDFKSAFPKWPSKELGTVVRNLEPAGIDLLSKMLCMDPSRRITARSALEHEYFRDVE 366
            RAPE+LLGS HYST VD+WSVGCIFAEMV ++ LFPGDSE  +L  IFR+LGTP E  WPGV++L D+   +PKW  ++L   V +L P G+DLL+KML  +P+ RI+A++AL+H YF  ++
Sbjct:  185 RAPEVLLGSTHYSTGVDMWSVGCIFAEMVRRQALFPGDSEFQQLLHIFRLLGTPTEQQWPGVSTLRDW-HVYPKWEPQDLTLAVPSLSPQGVDLLTKMLKYNPAERISAKTALDHPYFDSLD 305          
BLAST of CX287609 vs. ExPASy Swiss-Prot
Match: CKB12_ARATH (Cyclin-dependent kinase B1-2 OS=Arabidopsis thaliana GN=CDKB1-2 PE=1 SV=2)

HSP 1 Score: 150.599 bits (379), Expect = 3.921e-36
Identity = 69/122 (56.56%), Postives = 92/122 (75.41%), Query Frame = 1
Query:    1 RAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPGDSEIDELFKIFRVLGTPNEDTWPGVTSLPDFKSAFPKWPSKELGTVVRNLEPAGIDLLSKMLCMDPSRRITARSALEHEYFRDVE 366
            RAPE+LLGS HYST VD+WSVGCIFAEM+ ++ LFPGDSE  +L  IFR+LGTP E  WPGV +L D+   +PKW  ++L   V +L P GIDLL++ML  +P+ RI+A++AL+H YF  ++
Sbjct:  187 RAPEVLLGSTHYSTAVDIWSVGCIFAEMIRRQALFPGDSEFQQLLHIFRLLGTPTEQQWPGVMALRDW-HVYPKWEPQDLSRAVPSLSPEGIDLLTQMLKYNPAERISAKAALDHPYFDSLD 307          
BLAST of CX287609 vs. ExPASy Swiss-Prot
Match: CDC2H_PLAFK (Cell division control protein 2 homolog OS=Plasmodium falciparum (isolate K1 / Thailand) GN=CRK2 PE=1 SV=1)

HSP 1 Score: 150.214 bits (378), Expect = 5.121e-36
Identity = 68/120 (56.67%), Postives = 90/120 (75.00%), Query Frame = 1
Query:    1 RAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPGDSEIDELFKIFRVLGTPNEDTWPGVTSLPDFKSAFPKWPSKELGTVVRNLEPAGIDLLSKMLCMDPSRRITARSALEHEYFRD 360
            RAP++L+GS+ YST +D+WSVGCIFAEMVN  PLFPG SE D+L +IFR+LGTPN   WP VT LP +   F  +      + ++ L+ +GIDLLSKML +DP++RITA+ ALEH YF++
Sbjct:  167 RAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPKYDPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEHAYFKE 286          
BLAST of CX287609 vs. ExPASy Swiss-Prot
Match: CDC2H_PLAF7 (Cell division control protein 2 homolog OS=Plasmodium falciparum (isolate 3D7) GN=CRK2 PE=3 SV=1)

HSP 1 Score: 150.214 bits (378), Expect = 5.121e-36
Identity = 68/120 (56.67%), Postives = 90/120 (75.00%), Query Frame = 1
Query:    1 RAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPGDSEIDELFKIFRVLGTPNEDTWPGVTSLPDFKSAFPKWPSKELGTVVRNLEPAGIDLLSKMLCMDPSRRITARSALEHEYFRD 360
            RAP++L+GS+ YST +D+WSVGCIFAEMVN  PLFPG SE D+L +IFR+LGTPN   WP VT LP +   F  +      + ++ L+ +GIDLLSKML +DP++RITA+ ALEH YF++
Sbjct:  167 RAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPKYDPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEHAYFKE 286          
BLAST of CX287609 vs. ExPASy Swiss-Prot
Match: CKB21_ARATH (Cyclin-dependent kinase B2-1 OS=Arabidopsis thaliana GN=CDKB2-1 PE=1 SV=2)

HSP 1 Score: 147.902 bits (372), Expect = 2.542e-35
Identity = 66/121 (54.55%), Postives = 93/121 (76.86%), Query Frame = 1
Query:    1 RAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPGDSEIDELFKIFRVLGTPNEDTWPGVTSLPDFKSAFPKWPSKELGTVVRNLEPAGIDLLSKMLCMDPSRRITARSALEHEYFRDV 363
            RAPE+LLG+ HYST VD+WSVGCIFAE+V  + +F GDSE+ +L  IF++ GTPNE+ WPGV++L ++   +P+W    L + V NL+ AG+DLLSKML  +P++RI+A+ A+EH YF D+
Sbjct:  188 RAPEVLLGATHYSTAVDMWSVGCIFAELVTNQAIFQGDSELQQLLHIFKLFGTPNEEMWPGVSTLKNWHE-YPQWKPSTLSSAVPNLDEAGVDLLSKMLQYEPAKRISAKMAMEHPYFDDL 307          
BLAST of CX287609 vs. ExPASy Swiss-Prot
Match: CDC2D_ANTMA (Cell division control protein 2 homolog D OS=Antirrhinum majus GN=CDC2D PE=2 SV=1)

HSP 1 Score: 147.902 bits (372), Expect = 2.542e-35
Identity = 66/122 (54.10%), Postives = 95/122 (77.87%), Query Frame = 1
Query:    1 RAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPGDSEIDELFKIFRVLGTPNEDTWPGVTSLPDFKSAFPKWPSKELGTVVRNLEPAGIDLLSKMLCMDPSRRITARSALEHEYFRDVE 366
            RAPE+LLG+ HYS  VD+WSV CIFAE+V Q+ LFPGDSE+ +L  IFR+LGTPNE+ WPGV++L D+   +P+W ++ + + V  L+  G++LLS+ML  +PSRRI+A+ A+EH YF +++
Sbjct:  188 RAPEVLLGATHYSPAVDMWSVACIFAELVTQKALFPGDSELQQLLHIFRLLGTPNEEIWPGVSTLVDWHE-YPQWTAQPISSAVPGLDEKGLNLLSEMLHYEPSRRISAKKAMEHPYFDELD 308          
BLAST of CX287609 vs. ExPASy Swiss-Prot
Match: CDC2H_THEPA (Cell division control protein 2 homolog OS=Theileria parva GN=CRK2 PE=3 SV=1)

HSP 1 Score: 146.362 bits (368), Expect = 7.395e-35
Identity = 66/128 (51.56%), Postives = 96/128 (75.00%), Query Frame = 1
Query:    1 RAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPGDSEIDELFKIFRVLGTPNEDTWPGVTSLPDFKSAFPKWPSKELGTVVRNLEPAGIDLLSKMLCMDPSRRITARSALEHEYFRDVEFVP*YL 384
            RAP++L+GS+ YST VD+WSVGCIFAEM+N  PLFPG SE D+L +IF++LGTP+ D+WP V +LP +   F  +  +   ++V  L  +GIDL+S+ML +DP +RI+A+ AL+H+YF+D+   P +L
Sbjct:  167 RAPDVLMGSKKYSTAVDIWSVGCIFAEMINGVPLFPGISEQDQLKRIFKILGTPSVDSWPQVVNLPAYNPDFSYYEKQSWSSIVPKLNESGIDLISRMLQLDPVQRISAKEALKHDYFKDLHRPPEFL 294          
BLAST of CX287609 vs. ExPASy Swiss-Prot
Match: CDC2H_THEAN (Cell division control protein 2 homolog OS=Theileria annulata GN=CRK2 PE=2 SV=1)

HSP 1 Score: 145.206 bits (365), Expect = 1.647e-34
Identity = 65/121 (53.72%), Postives = 93/121 (76.86%), Query Frame = 1
Query:    1 RAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPGDSEIDELFKIFRVLGTPNEDTWPGVTSLPDFKSAFPKWPSKELGTVVRNLEPAGIDLLSKMLCMDPSRRITARSALEHEYFRDV 363
            RAP++L+GS+ YST VD+WSVGCIFAEM+N  PLFPG SE D+L +IF++LGTPN D+WP V +LP +   F  +  +   ++V  L  +GIDL+S+ML +DP +RI+A+ AL+H+YF+D+
Sbjct:  167 RAPDVLMGSKKYSTAVDIWSVGCIFAEMINGVPLFPGISEQDQLKRIFKILGTPNVDSWPQVVNLPAYNPDFCYYEKQAWSSIVPKLNESGIDLISRMLQLDPVQRISAKEALKHDYFKDL 287          
BLAST of CX287609 vs. ExPASy Swiss-Prot
Match: CC2H2_TRYBB (Cell division control protein 2 homolog 2 OS=Trypanosoma brucei brucei GN=CRK2 PE=3 SV=1)

HSP 1 Score: 145.206 bits (365), Expect = 1.647e-34
Identity = 67/121 (55.37%), Postives = 86/121 (71.07%), Query Frame = 1
Query:    1 RAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPGDSEIDELFKIFRVLGTPNEDTWPGVTSLPDFKSAFPKWPSKELGTVVRNLEPAGIDLLSKMLCMDPSRRITARSALEHEYFRDV 363
            RAPE+LLG + Y   VDVWS+GC+FAE+  +R LF GD+ I++LF IF++LGTP E TW GVTSLP     FP+W +K L T V  L+  G+DLL +MLC +P  RITA  AL+H YF +V
Sbjct:  211 RAPEVLLGDKQYLPAVDVWSMGCVFAELARRRSLFAGDTAINQLFSIFQLLGTPTEATWRGVTSLPHHNVNFPRWTAKPLRTAVPALDDDGVDLLRRMLCYNPRERITAYEALQHSYFDEV 331          
The following BLAST results are available for this feature:
BLAST of CX287609 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
CKB21_ORYSJ1.032e-3655.37Cyclin-dependent kinase B2-1 OS=Oryza sativa subsp... [more]
CKB11_ARATH3.002e-3657.38Cyclin-dependent kinase B1-1 OS=Arabidopsis thalia... [more]
CKB12_ARATH3.921e-3656.56Cyclin-dependent kinase B1-2 OS=Arabidopsis thalia... [more]
CDC2H_PLAFK5.121e-3656.67Cell division control protein 2 homolog OS=Plasmod... [more]
CDC2H_PLAF75.121e-3656.67Cell division control protein 2 homolog OS=Plasmod... [more]
CKB21_ARATH2.542e-3554.55Cyclin-dependent kinase B2-1 OS=Arabidopsis thalia... [more]
CDC2D_ANTMA2.542e-3554.10Cell division control protein 2 homolog D OS=Antir... [more]
CDC2H_THEPA7.395e-3551.56Cell division control protein 2 homolog OS=Theiler... [more]
CDC2H_THEAN1.647e-3453.72Cell division control protein 2 homolog OS=Theiler... [more]
CC2H2_TRYBB1.647e-3455.37Cell division control protein 2 homolog 2 OS=Trypa... [more]

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Properties
Property NameValue
Genbank descriptionC01011D08SK Veg1 Citrus clementina cDNA clone C01011D08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX287609 ID=CX287609; Name=CX287609; organism=Citrus clementina; type=EST; length=510bp
AGAGCACCTGAAATATTACTAGGATCTCGCCATTACTCTACTCCAGTTGA
TGTGTGGTCGGTGGGATGTATATTTGCTGAGATGGTGAACCAGCGGCCAT
TGTTTCCAGGAGACTCTGAGATTGATGAGTTATTCAAGATCTTCAGAGTC
TTGGGAACACCTAATGAGGACACATGGCCTGGAGTGACTTCATTGCCTGA
CTTTAAATCTGCCTTTCCTAAATGGCCTTCTAAGGAGTTGGGGACTGTTG
TTCGAAATCTTGAGCCAGCTGGCATTGATCTCCTTTCTAAAATGCTCTGC
ATGGATCCAAGCAGAAGAATTACTGCCAGAAGTGCTCTAGAACATGAATA
CTTCAGGGACGTCGAATTTGTACCCTAATATCTGTTGTATATGCTATTAG
AGTGTTGACATTATTGTGAAGCCTTTGGTTTTGATTGTTTGCGAAATTTG
CCGACTGTCTTTACTTGCAGTTTTACTGAAAAGTCTTACTACATGGAATG
GCTTTTTACA
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