CX287631

Overview
NameCX287631
Unique NameCX287631
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length399
Libraries
Library NameType
Veg1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CX287631 vs. ExPASy Swiss-Prot
Match: CATA2_GOSHI (Catalase isozyme 2 OS=Gossypium hirsutum GN=CAT2 PE=2 SV=1)

HSP 1 Score: 187.193 bits (474), Expect = 2.202e-47
Identity = 88/108 (81.48%), Postives = 98/108 (90.74%), Query Frame = 3 
Query:   75 MDPYKLLPSTTHNAPFMTTNAGAPVWNDNHSLTVGSRGPVLLEDYHLVEKLAHFARERIPERVVHARGASAKGFFECTHDISHLTCADLFRAPGVQTPVIVRFSTVIH 398
            MDPYK  PS++ ++PF TTN+GAPVWN+N SLTVG+RGP+LLEDYHLVEKLA+F RERIPERVVHARGASAKGFFE THDIS LTCAD  RAPGVQTP+IVRFSTVIH
Sbjct:    1 MDPYKFRPSSSFDSPFWTTNSGAPVWNNNSSLTVGARGPILLEDYHLVEKLANFDRERIPERVVHARGASAKGFFEVTHDISQLTCADFLRAPGVQTPLIVRFSTVIH 108
[Close]
BLAST of CX287631 vs. ExPASy Swiss-Prot
Match: CATA1_WHEAT (Catalase-1 OS=Triticum aestivum GN=CAT1 PE=2 SV=1)

HSP 1 Score: 187.193 bits (474), Expect = 2.202e-47
Identity = 87/108 (80.56%), Postives = 98/108 (90.74%), Query Frame = 3 
Query:   75 MDPYKLLPSTTHNAPFMTTNAGAPVWNDNHSLTVGSRGPVLLEDYHLVEKLAHFARERIPERVVHARGASAKGFFECTHDISHLTCADLFRAPGVQTPVIVRFSTVIH 398
            MDPYK  PS++ NAP  +TN+GAPVWN+++SLTVGSRGP+LLEDYHLVEK+A F RERIPERVVHARGA+AKGFFE THD+SHLTCAD  RAPGVQTPVIVRFSTVIH
Sbjct:    1 MDPYKYRPSSSFNAPMWSTNSGAPVWNNDNSLTVGSRGPILLEDYHLVEKIADFDRERIPERVVHARGATAKGFFEVTHDVSHLTCADFLRAPGVQTPVIVRFSTVIH 108
[Close]
BLAST of CX287631 vs. ExPASy Swiss-Prot
Match: CATA1_GOSHI (Catalase isozyme 1 OS=Gossypium hirsutum GN=CAT1 PE=2 SV=2)

HSP 1 Score: 186.422 bits (472), Expect = 3.757e-47
Identity = 90/108 (83.33%), Postives = 95/108 (87.96%), Query Frame = 3 
Query:   75 MDPYKLLPSTTHNAPFMTTNAGAPVWNDNHSLTVGSRGPVLLEDYHLVEKLAHFARERIPERVVHARGASAKGFFECTHDISHLTCADLFRAPGVQTPVIVRFSTVIH 398
            MDPYK  PS+  N+PF TTN+GAPVWN+N SLTVG RG  LLEDYHLVEKLA+F RERIPERVVHARGASAKGFFE THDISHLTCAD  RAPGVQTPVIVRFSTVIH
Sbjct:    1 MDPYKHRPSSAFNSPFWTTNSGAPVWNNNSSLTVGPRGQYLLEDYHLVEKLANFDRERIPERVVHARGASAKGFFEVTHDISHLTCADFLRAPGVQTPVIVRFSTVIH 108
[Close]
BLAST of CX287631 vs. ExPASy Swiss-Prot
Match: CATA_HELAN (Catalase OS=Helianthus annuus PE=2 SV=1)

HSP 1 Score: 185.267 bits (469), Expect = 8.369e-47
Identity = 89/108 (82.41%), Postives = 98/108 (90.74%), Query Frame = 3 
Query:   75 MDPYKLLPSTTHNAPFMTTNAGAPVWNDNHSLTVGSRGPVLLEDYHLVEKLAHFARERIPERVVHARGASAKGFFECTHDISHLTCADLFRAPGVQTPVIVRFSTVIH 398
            MDPYK   S+ +NAPF TTN+GAPV+N+N+SLTVGSRGP+LLEDYHLVEKLA+F RERIPERVVHARGASAKGFFE THDI+ LTCAD  RAPGVQTPVIVRFSTVIH
Sbjct:    1 MDPYKYRSSSAYNAPFWTTNSGAPVYNNNNSLTVGSRGPILLEDYHLVEKLANFDRERIPERVVHARGASAKGFFEVTHDITALTCADFLRAPGVQTPVIVRFSTVIH 108
[Close]
BLAST of CX287631 vs. ExPASy Swiss-Prot
Match: CATA2_ORYSJ (Catalase isozyme B OS=Oryza sativa subsp. japonica GN=CATB PE=2 SV=1)

HSP 1 Score: 185.267 bits (469), Expect = 8.369e-47
Identity = 87/108 (80.56%), Postives = 95/108 (87.96%), Query Frame = 3 
Query:   75 MDPYKLLPSTTHNAPFMTTNAGAPVWNDNHSLTVGSRGPVLLEDYHLVEKLAHFARERIPERVVHARGASAKGFFECTHDISHLTCADLFRAPGVQTPVIVRFSTVIH 398
            MDPYK  PS+  N+ F TTN+GAPVWN+N +LTVG RGP+LLEDYHL+EKLA F RERIPERVVHARGASAKGFFE THDISHLTCAD  RAPGVQTPVIVRFSTV+H
Sbjct:    1 MDPYKHRPSSGSNSTFWTTNSGAPVWNNNSALTVGERGPILLEDYHLIEKLAQFDRERIPERVVHARGASAKGFFEVTHDISHLTCADFLRAPGVQTPVIVRFSTVVH 108
[Close]
BLAST of CX287631 vs. ExPASy Swiss-Prot
Match: CATA2_ORYSI (Catalase isozyme B OS=Oryza sativa subsp. indica GN=CATB PE=2 SV=2)

HSP 1 Score: 185.267 bits (469), Expect = 8.369e-47
Identity = 87/108 (80.56%), Postives = 95/108 (87.96%), Query Frame = 3 
Query:   75 MDPYKLLPSTTHNAPFMTTNAGAPVWNDNHSLTVGSRGPVLLEDYHLVEKLAHFARERIPERVVHARGASAKGFFECTHDISHLTCADLFRAPGVQTPVIVRFSTVIH 398
            MDPYK  PS+  N+ F TTN+GAPVWN+N +LTVG RGP+LLEDYHL+EKLA F RERIPERVVHARGASAKGFFE THDISHLTCAD  RAPGVQTPVIVRFSTV+H
Sbjct:    1 MDPYKHRPSSGSNSTFWTTNSGAPVWNNNSALTVGERGPILLEDYHLIEKLAQFDRERIPERVVHARGASAKGFFEVTHDISHLTCADFLRAPGVQTPVIVRFSTVVH 108
[Close]
BLAST of CX287631 vs. ExPASy Swiss-Prot
Match: CATA2_SOLLC (Catalase isozyme 2 OS=Solanum lycopersicum GN=CAT2 PE=2 SV=1)

HSP 1 Score: 184.882 bits (468), Expect = 1.093e-46
Identity = 89/108 (82.41%), Postives = 97/108 (89.81%), Query Frame = 3 
Query:   75 MDPYKLLPSTTHNAPFMTTNAGAPVWNDNHSLTVGSRGPVLLEDYHLVEKLAHFARERIPERVVHARGASAKGFFECTHDISHLTCADLFRAPGVQTPVIVRFSTVIH 398
            MDPYK  PS+  N+PF TTN+GAPV+N+N SLTVG+RGPVLLEDYHLVEKLA+F RERI ERVVHARGASAKGFFE THDI+HLTCAD  RAPGVQTPVIVRFSTVIH
Sbjct:    1 MDPYKYRPSSAFNSPFCTTNSGAPVFNNNSSLTVGARGPVLLEDYHLVEKLANFDRERIAERVVHARGASAKGFFEVTHDIAHLTCADFLRAPGVQTPVIVRFSTVIH 108
[Close]
BLAST of CX287631 vs. ExPASy Swiss-Prot
Match: CATA1_MAIZE (Catalase isozyme 1 OS=Zea mays GN=CAT1 PE=2 SV=1)

HSP 1 Score: 184.882 bits (468), Expect = 1.093e-46
Identity = 86/108 (79.63%), Postives = 95/108 (87.96%), Query Frame = 3 
Query:   75 MDPYKLLPSTTHNAPFMTTNAGAPVWNDNHSLTVGSRGPVLLEDYHLVEKLAHFARERIPERVVHARGASAKGFFECTHDISHLTCADLFRAPGVQTPVIVRFSTVIH 398
            MDPYK  PS+  N+ F TTN+GAPVWN+N +LTVG RGP+LLEDYHL+EKLA F RERIPERVVHARGASAKGFFE THD+SHLTCAD  RAPGVQTPVIVRFSTV+H
Sbjct:    1 MDPYKHRPSSGSNSSFWTTNSGAPVWNNNSALTVGQRGPILLEDYHLIEKLAQFDRERIPERVVHARGASAKGFFEVTHDVSHLTCADFLRAPGVQTPVIVRFSTVVH 108
[Close]
BLAST of CX287631 vs. ExPASy Swiss-Prot
Match: CATA1_CUCPE (Catalase isozyme 1 OS=Cucurbita pepo GN=CAT1 PE=2 SV=1)

HSP 1 Score: 184.882 bits (468), Expect = 1.093e-46
Identity = 87/108 (80.56%), Postives = 97/108 (89.81%), Query Frame = 3 
Query:   75 MDPYKLLPSTTHNAPFMTTNAGAPVWNDNHSLTVGSRGPVLLEDYHLVEKLAHFARERIPERVVHARGASAKGFFECTHDISHLTCADLFRAPGVQTPVIVRFSTVIH 398
            MDPY+  PS+  NAPF TTN+GAPVWN+N S+TVG RGP+LLEDYHLVEKLA+F RERIPERVVHARGASAKGFFE THDI++L+CAD  RAPGVQTPVIVRFSTVIH
Sbjct:    1 MDPYRHRPSSAFNAPFWTTNSGAPVWNNNSSMTVGPRGPILLEDYHLVEKLANFDRERIPERVVHARGASAKGFFEVTHDITNLSCADFLRAPGVQTPVIVRFSTVIH 108
[Close]
BLAST of CX287631 vs. ExPASy Swiss-Prot
Match: CATA1_ARATH (Catalase-1 OS=Arabidopsis thaliana GN=CAT1 PE=1 SV=3)

HSP 1 Score: 183.341 bits (464), Expect = 3.180e-46
Identity = 85/108 (78.70%), Postives = 97/108 (89.81%), Query Frame = 3 
Query:   75 MDPYKLLPSTTHNAPFMTTNAGAPVWNDNHSLTVGSRGPVLLEDYHLVEKLAHFARERIPERVVHARGASAKGFFECTHDISHLTCADLFRAPGVQTPVIVRFSTVIH 398
            MDPY++ PS+ H++PF TTN+GAPVWN+N SLTVG+RGP+LLEDYHL+EKLA+F RERIPERVVHARGASAKGFFE THDI+ LT AD  R PGVQTPVIVRFSTVIH
Sbjct:    1 MDPYRVRPSSAHDSPFFTTNSGAPVWNNNSSLTVGTRGPILLEDYHLLEKLANFDRERIPERVVHARGASAKGFFEVTHDITQLTSADFLRGPGVQTPVIVRFSTVIH 108
The following BLAST results are available for this feature:
BLAST of CX287631 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 141
Match NameE-valueIdentityDescription
CATA2_GOSHI2.202e-4781.48Catalase isozyme 2 OS=Gossypium hirsutum GN=CAT2 P... [more]
CATA1_WHEAT2.202e-4780.56Catalase-1 OS=Triticum aestivum GN=CAT1 PE=2 SV=1[more]
CATA1_GOSHI3.757e-4783.33Catalase isozyme 1 OS=Gossypium hirsutum GN=CAT1 P... [more]
CATA_HELAN8.369e-4782.41Catalase OS=Helianthus annuus PE=2 SV=1[more]
CATA2_ORYSJ8.369e-4780.56Catalase isozyme B OS=Oryza sativa subsp. japonica... [more]
CATA2_ORYSI8.369e-4780.56Catalase isozyme B OS=Oryza sativa subsp. indica G... [more]
CATA2_SOLLC1.093e-4682.41Catalase isozyme 2 OS=Solanum lycopersicum GN=CAT2... [more]
CATA1_MAIZE1.093e-4679.63Catalase isozyme 1 OS=Zea mays GN=CAT1 PE=2 SV=1[more]
CATA1_CUCPE1.093e-4680.56Catalase isozyme 1 OS=Cucurbita pepo GN=CAT1 PE=2 ... [more]
CATA1_ARATH3.180e-4678.70Catalase-1 OS=Arabidopsis thaliana GN=CAT1 PE=1 SV... [more]

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Properties
Property NameValue
Genbank descriptionC01011F07SK Veg1 Citrus clementina cDNA clone C01011F07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX287631 ID=CX287631; Name=CX287631; organism=Citrus clementina; type=EST; length=399bp
TCTCGACTCAACTCCACTTCTCCTTTCTTACGATAATAATAACAGTAGCA
AAATCTTCAGCAAGAAATATCGCCATGGATCCCTACAAATTGCTTCCGTC
AACTACTCACAATGCCCCCTTTATGACTACAAATGCCGGCGCTCCTGTCT
GGAACGACAATCACTCCTTGACTGTTGGAAGTAGAGGTCCTGTCCTTCTT
GAGGATTATCATCTGGTGGAGAAACTAGCTCATTTTGCCAGGGAGAGGAT
TCCAGAACGTGTCGTCCATGCTAGGGGAGCCAGTGCTAAGGGTTTCTTTG
AGTGCACCCATGATATTTCTCACCTTACTTGTGCTGATCTTTTTCGAGCT
CCAGGGGTTCAGACACCTGTCATTGTTCGCTTCTCCACTGTTATCCATG
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