CX287631

Overview
NameCX287631
Unique NameCX287631
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length399
Libraries
Library NameType
Veg1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CX287631 vs. ExPASy Swiss-Prot
Match: CATA_AVIMR (Catalase OS=Avicennia marina PE=2 SV=1)

HSP 1 Score: 182.57 bits (462), Expect = 5.425e-46
Identity = 85/108 (78.70%), Postives = 94/108 (87.04%), Query Frame = 3 
Query:   75 MDPYKLLPSTTHNAPFMTTNAGAPVWNDNHSLTVGSRGPVLLEDYHLVEKLAHFARERIPERVVHARGASAKGFFECTHDISHLTCADLFRAPGVQTPVIVRFSTVIH 398
            MDPYK  PS++ N P  TTN G PV+NDN SLTVG+RGPVLLEDY L++KLAHF RERIPERVVHARGA+AKGFFE THD+SHLTCAD  RAPGVQTP+IVRFSTVIH
Sbjct:    1 MDPYKYCPSSSFNTPHTTTNGGHPVYNDNSSLTVGTRGPVLLEDYQLIDKLAHFTRERIPERVVHARGATAKGFFEVTHDVSHLTCADFLRAPGVQTPLIVRFSTVIH 108
[Close]
BLAST of CX287631 vs. ExPASy Swiss-Prot
Match: CATA_IPOBA (Catalase OS=Ipomoea batatas PE=2 SV=1)

HSP 1 Score: 181.8 bits (460), Expect = 9.253e-46
Identity = 85/108 (78.70%), Postives = 95/108 (87.96%), Query Frame = 3 
Query:   75 MDPYKLLPSTTHNAPFMTTNAGAPVWNDNHSLTVGSRGPVLLEDYHLVEKLAHFARERIPERVVHARGASAKGFFECTHDISHLTCADLFRAPGVQTPVIVRFSTVIH 398
            MDP K  PS++ N PF TTN+GAPVWN+  +LTVGSRGP+LLEDYHLVEK+ +F RERIPERVVHARGASAKGFFE THDI+HLTCAD  RAPGVQTP+IVRFSTVIH
Sbjct:    1 MDPSKYRPSSSFNTPFCTTNSGAPVWNNTCALTVGSRGPILLEDYHLVEKIQNFTRERIPERVVHARGASAKGFFEVTHDITHLTCADFLRAPGVQTPLIVRFSTVIH 108
[Close]
BLAST of CX287631 vs. ExPASy Swiss-Prot
Match: CATA1_ORYSJ (Catalase isozyme A OS=Oryza sativa subsp. japonica GN=CATA PE=2 SV=1)

HSP 1 Score: 181.8 bits (460), Expect = 9.253e-46
Identity = 83/108 (76.85%), Postives = 94/108 (87.04%), Query Frame = 3 
Query:   75 MDPYKLLPSTTHNAPFMTTNAGAPVWNDNHSLTVGSRGPVLLEDYHLVEKLAHFARERIPERVVHARGASAKGFFECTHDISHLTCADLFRAPGVQTPVIVRFSTVIH 398
            MDP K  PS++ +    TTNAGAPVWNDN +LTVG RGP+LLEDYHL+EK+AHFARERIPERVVHARGASAKGFFECTHD++ +TCAD  R+PG QTPVIVRFSTVIH
Sbjct:    1 MDPCKFRPSSSFDTKTTTTNAGAPVWNDNEALTVGPRGPILLEDYHLIEKVAHFARERIPERVVHARGASAKGFFECTHDVTDITCADFLRSPGAQTPVIVRFSTVIH 108
[Close]
BLAST of CX287631 vs. ExPASy Swiss-Prot
Match: CATA1_ORYSI (Catalase isozyme A OS=Oryza sativa subsp. indica PE=2 SV=1)

HSP 1 Score: 181.8 bits (460), Expect = 9.253e-46
Identity = 83/108 (76.85%), Postives = 94/108 (87.04%), Query Frame = 3 
Query:   75 MDPYKLLPSTTHNAPFMTTNAGAPVWNDNHSLTVGSRGPVLLEDYHLVEKLAHFARERIPERVVHARGASAKGFFECTHDISHLTCADLFRAPGVQTPVIVRFSTVIH 398
            MDP K  PS++ +    TTNAGAPVWNDN +LTVG RGP+LLEDYHL+EK+AHFARERIPERVVHARGASAKGFFECTHD++ +TCAD  R+PG QTPVIVRFSTVIH
Sbjct:    1 MDPCKFRPSSSFDTKTTTTNAGAPVWNDNEALTVGPRGPILLEDYHLIEKVAHFARERIPERVVHARGASAKGFFECTHDVTDITCADFLRSPGAQTPVIVRFSTVIH 108
[Close]
BLAST of CX287631 vs. ExPASy Swiss-Prot
Match: CATA2_MAIZE (Catalase isozyme 2 OS=Zea mays GN=CAT2 PE=2 SV=3)

HSP 1 Score: 180.644 bits (457), Expect = 2.061e-45
Identity = 87/108 (80.56%), Postives = 96/108 (88.89%), Query Frame = 3 
Query:   75 MDPYKLLPSTTHNAPFMTTNAGAPVWNDNHSLTVGSRGPVLLEDYHLVEKLAHFARERIPERVVHARGASAKGFFECTHDISHLTCADLFRAPGVQTPVIVRFSTVIH 398
            MDPYK  PS+  NAP+ TTN+GAPVWN++ SLTVG+RGP+LLEDYH  EKLA+F RERIPERVVHARGASAKGFFE THDI+HLTCAD  RAPGVQTPVIVRFSTVIH
Sbjct:    1 MDPYKHRPSSAFNAPYWTTNSGAPVWNNDSSLTVGARGPILLEDYHC-EKLANFDRERIPERVVHARGASAKGFFEVTHDITHLTCADFLRAPGVQTPVIVRFSTVIH 107
[Close]
BLAST of CX287631 vs. ExPASy Swiss-Prot
Match: CATA2_NICPL (Catalase isozyme 2 OS=Nicotiana plumbaginifolia GN=CAT2 PE=2 SV=1)

HSP 1 Score: 180.259 bits (456), Expect = 2.692e-45
Identity = 86/108 (79.63%), Postives = 95/108 (87.96%), Query Frame = 3 
Query:   75 MDPYKLLPSTTHNAPFMTTNAGAPVWNDNHSLTVGSRGPVLLEDYHLVEKLAHFARERIPERVVHARGASAKGFFECTHDISHLTCADLFRAPGVQTPVIVRFSTVIH 398
            MDP K  PS+ +++PF+TTNAG PV+N+  SLTVG RGPVLLEDYHL+EKLA F RERIPERVVHARGASAKGFFE THDISHLTCAD  RAPGVQTPVIVRFSTV+H
Sbjct:    1 MDPSKFRPSSAYDSPFLTTNAGGPVYNNVSSLTVGPRGPVLLEDYHLIEKLATFDRERIPERVVHARGASAKGFFEVTHDISHLTCADFLRAPGVQTPVIVRFSTVVH 108
[Close]
BLAST of CX287631 vs. ExPASy Swiss-Prot
Match: CATA3_ARATH (Catalase-3 OS=Arabidopsis thaliana GN=CAT3 PE=1 SV=3)

HSP 1 Score: 179.489 bits (454), Expect = 4.592e-45
Identity = 85/108 (78.70%), Postives = 94/108 (87.04%), Query Frame = 3 
Query:   75 MDPYKLLPSTTHNAPFMTTNAGAPVWNDNHSLTVGSRGPVLLEDYHLVEKLAHFARERIPERVVHARGASAKGFFECTHDISHLTCADLFRAPGVQTPVIVRFSTVIH 398
            MDPYK  PS+ +NAPF TTN GAPV N+  SLT+G RGPVLLEDYHL+EK+A+F RERIPERVVHARG SAKGFFE THDIS+LTCAD  RAPGVQTPVIVRFSTV+H
Sbjct:    1 MDPYKYRPSSAYNAPFYTTNGGAPVSNNISSLTIGERGPVLLEDYHLIEKVANFTRERIPERVVHARGISAKGFFEVTHDISNLTCADFLRAPGVQTPVIVRFSTVVH 108
[Close]
BLAST of CX287631 vs. ExPASy Swiss-Prot
Match: CATA2_WHEAT (Catalase OS=Triticum aestivum GN=CATA PE=2 SV=1)

HSP 1 Score: 179.489 bits (454), Expect = 4.592e-45
Identity = 83/108 (76.85%), Postives = 95/108 (87.96%), Query Frame = 3 
Query:   75 MDPYKLLPSTTHNAPFMTTNAGAPVWNDNHSLTVGSRGPVLLEDYHLVEKLAHFARERIPERVVHARGASAKGFFECTHDISHLTCADLFRAPGVQTPVIVRFSTVIH 398
            MDPYK  P++  N+ + TTN+GAPVWN+N++LTVG RGP+LLEDYHL+EKLA F RERIPERVVHARGASAKGFFE THD+S LTCAD  RAPGVQTPVIVRFSTV+H
Sbjct:    1 MDPYKHRPTSGANSAYWTTNSGAPVWNNNNALTVGHRGPILLEDYHLIEKLAQFDRERIPERVVHARGASAKGFFEVTHDVSQLTCADFLRAPGVQTPVIVRFSTVVH 108
[Close]
BLAST of CX287631 vs. ExPASy Swiss-Prot
Match: CATA2_HORVU (Catalase isozyme 2 OS=Hordeum vulgare GN=CAT2 PE=2 SV=1)

HSP 1 Score: 179.489 bits (454), Expect = 4.592e-45
Identity = 83/108 (76.85%), Postives = 93/108 (86.11%), Query Frame = 3 
Query:   75 MDPYKLLPSTTHNAPFMTTNAGAPVWNDNHSLTVGSRGPVLLEDYHLVEKLAHFARERIPERVVHARGASAKGFFECTHDISHLTCADLFRAPGVQTPVIVRFSTVIH 398
            MDP K  PS++ +    TTNAG PVWNDN +LTVG RGP+LLEDYHL+EK+AHFARERIPERVVHARGASAKGFFECTHD++ LTCAD  RAPG +TPVIVRFSTVIH
Sbjct:    1 MDPCKFRPSSSFDTKTTTTNAGQPVWNDNEALTVGPRGPILLEDYHLLEKIAHFARERIPERVVHARGASAKGFFECTHDVTGLTCADFLRAPGARTPVIVRFSTVIH 108
[Close]
BLAST of CX287631 vs. ExPASy Swiss-Prot
Match: CATA1_HORVU (Catalase isozyme 1 OS=Hordeum vulgare GN=CAT1 PE=2 SV=1)

HSP 1 Score: 179.489 bits (454), Expect = 4.592e-45
Identity = 83/108 (76.85%), Postives = 95/108 (87.96%), Query Frame = 3 
Query:   75 MDPYKLLPSTTHNAPFMTTNAGAPVWNDNHSLTVGSRGPVLLEDYHLVEKLAHFARERIPERVVHARGASAKGFFECTHDISHLTCADLFRAPGVQTPVIVRFSTVIH 398
            MDPYK  P++  N+ + TTN+GAPVWN+N++LTVG RGP+LLEDYHL+EKLA F RERIPERVVHARGASAKGFFE THD+S LTCAD  RAPGVQTPVIVRFSTV+H
Sbjct:    1 MDPYKHRPTSGANSAYWTTNSGAPVWNNNNALTVGHRGPILLEDYHLIEKLAQFDRERIPERVVHARGASAKGFFEVTHDVSQLTCADFLRAPGVQTPVIVRFSTVVH 108
The following BLAST results are available for this feature:
BLAST of CX287631 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 141
Match NameE-valueIdentityDescription
CATA_AVIMR5.425e-4678.70Catalase OS=Avicennia marina PE=2 SV=1[more]
CATA_IPOBA9.253e-4678.70Catalase OS=Ipomoea batatas PE=2 SV=1[more]
CATA1_ORYSJ9.253e-4676.85Catalase isozyme A OS=Oryza sativa subsp. japonica... [more]
CATA1_ORYSI9.253e-4676.85Catalase isozyme A OS=Oryza sativa subsp. indica P... [more]
CATA2_MAIZE2.061e-4580.56Catalase isozyme 2 OS=Zea mays GN=CAT2 PE=2 SV=3[more]
CATA2_NICPL2.692e-4579.63Catalase isozyme 2 OS=Nicotiana plumbaginifolia GN... [more]
CATA3_ARATH4.592e-4578.70Catalase-3 OS=Arabidopsis thaliana GN=CAT3 PE=1 SV... [more]
CATA2_WHEAT4.592e-4576.85Catalase OS=Triticum aestivum GN=CATA PE=2 SV=1[more]
CATA2_HORVU4.592e-4576.85Catalase isozyme 2 OS=Hordeum vulgare GN=CAT2 PE=2... [more]
CATA1_HORVU4.592e-4576.85Catalase isozyme 1 OS=Hordeum vulgare GN=CAT1 PE=2... [more]

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Properties
Property NameValue
Genbank descriptionC01011F07SK Veg1 Citrus clementina cDNA clone C01011F07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX287631 ID=CX287631; Name=CX287631; organism=Citrus clementina; type=EST; length=399bp
TCTCGACTCAACTCCACTTCTCCTTTCTTACGATAATAATAACAGTAGCA
AAATCTTCAGCAAGAAATATCGCCATGGATCCCTACAAATTGCTTCCGTC
AACTACTCACAATGCCCCCTTTATGACTACAAATGCCGGCGCTCCTGTCT
GGAACGACAATCACTCCTTGACTGTTGGAAGTAGAGGTCCTGTCCTTCTT
GAGGATTATCATCTGGTGGAGAAACTAGCTCATTTTGCCAGGGAGAGGAT
TCCAGAACGTGTCGTCCATGCTAGGGGAGCCAGTGCTAAGGGTTTCTTTG
AGTGCACCCATGATATTTCTCACCTTACTTGTGCTGATCTTTTTCGAGCT
CCAGGGGTTCAGACACCTGTCATTGTTCGCTTCTCCACTGTTATCCATG
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