CX287631

Overview
NameCX287631
Unique NameCX287631
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length399
Libraries
Library NameType
Veg1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX287631 vs. ExPASy Swiss-Prot
Match: CATA1_NICPL (Catalase isozyme 1 (Fragment) OS=Nicotiana plumbaginifolia GN=CAT1 PE=2 SV=1)

HSP 1 Score: 177.178 bits (448), Expect = 2.279e-44
Identity = 84/101 (83.17%), Postives = 93/101 (92.08%), Query Frame = 3
Query:   96 PSTTHNAPFMTTNAGAPVWNDNHSLTVGSRGPVLLEDYHLVEKLAHFARERIPERVVHARGASAKGFFECTHDISHLTCADLFRAPGVQTPVIVRFSTVIH 398
            PS+  N+PF TTN+GAPV+N+N SLTVG+RGPVLLEDYHLVEKLA+F RER+PERVVHARGASAKGFFE THDI+HLTCAD  RAPGVQTPVIVRFSTVIH
Sbjct:    1 PSSAFNSPFCTTNSGAPVFNNNSSLTVGARGPVLLEDYHLVEKLANFDRERVPERVVHARGASAKGFFEVTHDITHLTCADFLRAPGVQTPVIVRFSTVIH 101          
BLAST of CX287631 vs. ExPASy Swiss-Prot
Match: CATA2_RICCO (Catalase isozyme 2 OS=Ricinus communis GN=CAT2 PE=2 SV=1)

HSP 1 Score: 176.407 bits (446), Expect = 3.888e-44
Identity = 82/108 (75.93%), Postives = 94/108 (87.04%), Query Frame = 3
Query:   75 MDPYKLLPSTTHNAPFMTTNAGAPVWNDNHSLTVGSRGPVLLEDYHLVEKLAHFARERIPERVVHARGASAKGFFECTHDISHLTCADLFRAPGVQTPVIVRFSTVIH 398
            MDPYK  PS++++ PF TTNAG PV N+N S+TVG RGP+LLEDYH++EKLA+F RERIPERVVHARG SAKGFFE THD++ LTCAD  RAPGVQTPVIVRFSTVIH
Sbjct:    1 MDPYKFRPSSSNDTPFWTTNAGDPVSNNNSSMTVGPRGPILLEDYHMIEKLANFTRERIPERVVHARGMSAKGFFEVTHDVTDLTCADFLRAPGVQTPVIVRFSTVIH 108          
BLAST of CX287631 vs. ExPASy Swiss-Prot
Match: CATA3_CUCPE (Catalase isozyme 3 OS=Cucurbita pepo GN=CAT3 PE=2 SV=1)

HSP 1 Score: 176.022 bits (445), Expect = 5.077e-44
Identity = 81/108 (75.00%), Postives = 92/108 (85.19%), Query Frame = 3
Query:   75 MDPYKLLPSTTHNAPFMTTNAGAPVWNDNHSLTVGSRGPVLLEDYHLVEKLAHFARERIPERVVHARGASAKGFFECTHDISHLTCADLFRAPGVQTPVIVRFSTVIH 398
            MDPYK  PS+ +N PF TTN+GAP+WN+   ++VG RGP+LLEDY L+EK+A F RERIPERVVH RGASAKGFFE THDIS+LTCAD  RAPGVQTPVIVRFSTVIH
Sbjct:    1 MDPYKYRPSSAYNTPFCTTNSGAPIWNNTAVMSVGERGPILLEDYQLIEKIATFTRERIPERVVHRRGASAKGFFEVTHDISNLTCADFLRAPGVQTPVIVRFSTVIH 108          
BLAST of CX287631 vs. ExPASy Swiss-Prot
Match: CATA2_CUCPE (Catalase isozyme 2 OS=Cucurbita pepo GN=CAT2 PE=2 SV=1)

HSP 1 Score: 175.252 bits (443), Expect = 8.661e-44
Identity = 80/108 (74.07%), Postives = 92/108 (85.19%), Query Frame = 3
Query:   75 MDPYKLLPSTTHNAPFMTTNAGAPVWNDNHSLTVGSRGPVLLEDYHLVEKLAHFARERIPERVVHARGASAKGFFECTHDISHLTCADLFRAPGVQTPVIVRFSTVIH 398
            MDPYK  PS+ +N PF TTN+GAP+WN+   ++VG RGP+LLEDY L+EK+A F RERIPERVVHARGASAKGFFE THD+S L+CAD  RAPGVQTPVIVRFSTVIH
Sbjct:    1 MDPYKYRPSSAYNTPFCTTNSGAPIWNNTAVMSVGERGPILLEDYQLIEKIATFTRERIPERVVHARGASAKGFFEVTHDVSDLSCADFLRAPGVQTPVIVRFSTVIH 108          
BLAST of CX287631 vs. ExPASy Swiss-Prot
Match: CATA_CAPAN (Catalase OS=Capsicum annuum GN=CAT PE=2 SV=1)

HSP 1 Score: 174.866 bits (442), Expect = 1.131e-43
Identity = 84/108 (77.78%), Postives = 93/108 (86.11%), Query Frame = 3
Query:   75 MDPYKLLPSTTHNAPFMTTNAGAPVWNDNHSLTVGSRGPVLLEDYHLVEKLAHFARERIPERVVHARGASAKGFFECTHDISHLTCADLFRAPGVQTPVIVRFSTVIH 398
            MD  K  PS+ +++PF+TTNAG PV+N+  SLTVG RGPVLLEDYHL+EKLA F RERIPERVVHARGASAKGFFE THDISHLTCAD  RAPGVQTPVI RFSTV+H
Sbjct:    1 MDLSKYRPSSAYDSPFLTTNAGGPVYNNVSSLTVGPRGPVLLEDYHLIEKLATFVRERIPERVVHARGASAKGFFEVTHDISHLTCADFLRAPGVQTPVICRFSTVVH 108          
BLAST of CX287631 vs. ExPASy Swiss-Prot
Match: CATA1_TOBAC (Catalase isozyme 1 OS=Nicotiana tabacum GN=CAT-1 PE=1 SV=2)

HSP 1 Score: 174.481 bits (441), Expect = 1.477e-43
Identity = 84/108 (77.78%), Postives = 93/108 (86.11%), Query Frame = 3
Query:   75 MDPYKLLPSTTHNAPFMTTNAGAPVWNDNHSLTVGSRGPVLLEDYHLVEKLAHFARERIPERVVHARGASAKGFFECTHDISHLTCADLFRAPGVQTPVIVRFSTVIH 398
            MD  K  PS+ +++PF+TTNAG PV+N+  SLTVG RGPVLLEDYHL+EKLA F RERIPERVVHARGASAKGFFE THDISHLTCAD  RAPGVQTPVI RFSTV+H
Sbjct:    1 MDLSKFRPSSAYDSPFLTTNAGGPVYNNVSSLTVGPRGPVLLEDYHLIEKLATFDRERIPERVVHARGASAKGFFEVTHDISHLTCADFLRAPGVQTPVICRFSTVVH 108          
BLAST of CX287631 vs. ExPASy Swiss-Prot
Match: CATA_SOLME (Catalase OS=Solanum melongena PE=2 SV=1)

HSP 1 Score: 173.326 bits (438), Expect = 3.291e-43
Identity = 83/108 (76.85%), Postives = 92/108 (85.19%), Query Frame = 3
Query:   75 MDPYKLLPSTTHNAPFMTTNAGAPVWNDNHSLTVGSRGPVLLEDYHLVEKLAHFARERIPERVVHARGASAKGFFECTHDISHLTCADLFRAPGVQTPVIVRFSTVIH 398
            MD  K  PS+ ++ PF+TTNAG PV+N+  SLTVG RGPVLLEDYHL+EKLA F RERIPERVVHARGASAKGFFE THD+SHLTCAD  RAPGVQTPVI RFSTV+H
Sbjct:    1 MDLSKYRPSSAYDTPFLTTNAGGPVYNNVSSLTVGPRGPVLLEDYHLIEKLATFDRERIPERVVHARGASAKGFFEVTHDVSHLTCADFLRAPGVQTPVICRFSTVVH 108          
BLAST of CX287631 vs. ExPASy Swiss-Prot
Match: CATA2_SOLTU (Catalase isozyme 2 OS=Solanum tuberosum GN=CAT2 PE=3 SV=1)

HSP 1 Score: 172.555 bits (436), Expect = 5.614e-43
Identity = 82/108 (75.93%), Postives = 92/108 (85.19%), Query Frame = 3
Query:   75 MDPYKLLPSTTHNAPFMTTNAGAPVWNDNHSLTVGSRGPVLLEDYHLVEKLAHFARERIPERVVHARGASAKGFFECTHDISHLTCADLFRAPGVQTPVIVRFSTVIH 398
            MDP K  PS+ ++ PF+TTNAG PV+N+  SLTVG RGPVLLEDY+L+EKLA F RE+IPERVVHARGASAKGFFE THDISHLTCAD  RAPG QTPVI RFSTV+H
Sbjct:    1 MDPSKYRPSSAYDTPFLTTNAGGPVYNNVSSLTVGPRGPVLLEDYYLIEKLATFDREKIPERVVHARGASAKGFFEVTHDISHLTCADFLRAPGAQTPVICRFSTVVH 108          
BLAST of CX287631 vs. ExPASy Swiss-Prot
Match: CATA1_SOLTU (Catalase isozyme 1 OS=Solanum tuberosum GN=CAT1 PE=2 SV=1)

HSP 1 Score: 172.555 bits (436), Expect = 5.614e-43
Identity = 82/108 (75.93%), Postives = 92/108 (85.19%), Query Frame = 3
Query:   75 MDPYKLLPSTTHNAPFMTTNAGAPVWNDNHSLTVGSRGPVLLEDYHLVEKLAHFARERIPERVVHARGASAKGFFECTHDISHLTCADLFRAPGVQTPVIVRFSTVIH 398
            MDP K  PS+ ++ PF+TTNAG PV+N+  SLTVG RGPVLLEDY+L+EKLA F RE+IPERVVHARGASAKGFFE THDISHLTCAD  RAPG QTPVI RFSTV+H
Sbjct:    1 MDPSKYRPSSAYDTPFLTTNAGGPVYNNVSSLTVGPRGPVLLEDYYLIEKLATFDREKIPERVVHARGASAKGFFEVTHDISHLTCADFLRAPGAQTPVICRFSTVVH 108          
BLAST of CX287631 vs. ExPASy Swiss-Prot
Match: CATA1_SOLLC (Catalase isozyme 1 OS=Solanum lycopersicum GN=CAT1 PE=2 SV=1)

HSP 1 Score: 172.555 bits (436), Expect = 5.614e-43
Identity = 82/108 (75.93%), Postives = 92/108 (85.19%), Query Frame = 3
Query:   75 MDPYKLLPSTTHNAPFMTTNAGAPVWNDNHSLTVGSRGPVLLEDYHLVEKLAHFARERIPERVVHARGASAKGFFECTHDISHLTCADLFRAPGVQTPVIVRFSTVIH 398
            MDP K  PS+ ++ PF+TTNAG PV+N+  SLTVG RGPVLLEDY+L+EKLA F RE+IPERVVHARGASAKGFFE THDISHLTCAD  RAPG QTPVI RFSTV+H
Sbjct:    1 MDPSKYRPSSAYDTPFLTTNAGGPVYNNVSSLTVGPRGPVLLEDYYLIEKLATFDREKIPERVVHARGASAKGFFEVTHDISHLTCADFLRAPGAQTPVICRFSTVVH 108          
The following BLAST results are available for this feature:
BLAST of CX287631 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 141
Match NameE-valueIdentityDescription
CATA1_NICPL2.279e-4483.17Catalase isozyme 1 (Fragment) OS=Nicotiana plumbag... [more]
CATA2_RICCO3.888e-4475.93Catalase isozyme 2 OS=Ricinus communis GN=CAT2 PE=... [more]
CATA3_CUCPE5.077e-4475.00Catalase isozyme 3 OS=Cucurbita pepo GN=CAT3 PE=2 ... [more]
CATA2_CUCPE8.661e-4474.07Catalase isozyme 2 OS=Cucurbita pepo GN=CAT2 PE=2 ... [more]
CATA_CAPAN1.131e-4377.78Catalase OS=Capsicum annuum GN=CAT PE=2 SV=1[more]
CATA1_TOBAC1.477e-4377.78Catalase isozyme 1 OS=Nicotiana tabacum GN=CAT-1 P... [more]
CATA_SOLME3.291e-4376.85Catalase OS=Solanum melongena PE=2 SV=1[more]
CATA2_SOLTU5.614e-4375.93Catalase isozyme 2 OS=Solanum tuberosum GN=CAT2 PE... [more]
CATA1_SOLTU5.614e-4375.93Catalase isozyme 1 OS=Solanum tuberosum GN=CAT1 PE... [more]
CATA1_SOLLC5.614e-4375.93Catalase isozyme 1 OS=Solanum lycopersicum GN=CAT1... [more]

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Properties
Property NameValue
Genbank descriptionC01011F07SK Veg1 Citrus clementina cDNA clone C01011F07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX287631 ID=CX287631; Name=CX287631; organism=Citrus clementina; type=EST; length=399bp
TCTCGACTCAACTCCACTTCTCCTTTCTTACGATAATAATAACAGTAGCA
AAATCTTCAGCAAGAAATATCGCCATGGATCCCTACAAATTGCTTCCGTC
AACTACTCACAATGCCCCCTTTATGACTACAAATGCCGGCGCTCCTGTCT
GGAACGACAATCACTCCTTGACTGTTGGAAGTAGAGGTCCTGTCCTTCTT
GAGGATTATCATCTGGTGGAGAAACTAGCTCATTTTGCCAGGGAGAGGAT
TCCAGAACGTGTCGTCCATGCTAGGGGAGCCAGTGCTAAGGGTTTCTTTG
AGTGCACCCATGATATTTCTCACCTTACTTGTGCTGATCTTTTTCGAGCT
CCAGGGGTTCAGACACCTGTCATTGTTCGCTTCTCCACTGTTATCCATG
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