CX287631

Overview
NameCX287631
Unique NameCX287631
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length399
Libraries
Library NameType
Veg1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX287631 vs. ExPASy Swiss-Prot
Match: CATA_SECCE (Catalase OS=Secale cereale PE=2 SV=1)

HSP 1 Score: 154.451 bits (389), Expect = 1.582e-37
Identity = 74/108 (68.52%), Postives = 85/108 (78.70%), Query Frame = 3
Query:   75 MDPYKLLPSTTHNAPFMTTNAGAPVWNDNHSLTVGSRGPVLLEDYHLVEKLAHFARERIPERVVHARGASAKGFFECTHDISHLTCADLFRAPGVQTPVIVRFSTVIH 398
            MDP K  PS++ +    TTN G PVWNDN +LTVG RGP+LLEDYHL+EK+AHFAR+ IPE  VHA  ASAKGFFECTHD++ LTCAD   +PG  TPVIVRFSTVIH
Sbjct:    1 MDPCKFRPSSSFDTKTTTTNPGQPVWNDNEALTVGPRGPILLEDYHLLEKIAHFARD-IPEPFVHAGRASAKGFFECTHDVTGLTCADFLPSPGAGTPVIVRFSTVIH 107          
BLAST of CX287631 vs. ExPASy Swiss-Prot
Match: CATA_LACSK (Catalase OS=Lactobacillus sakei GN=katA PE=3 SV=2)

HSP 1 Score: 111.309 bits (277), Expect = 1.536e-24
Identity = 57/91 (62.64%), Postives = 68/91 (74.73%), Query Frame = 3
Query:  123 MTTNAGAPVWNDN-HSLTVGSRGPVLLEDYHLVEKLAHFARERIPERVVHARGASAKGFFECTHDISHLTCADLFRAPGVQTPVIVRFSTV 392
            +TTN G P W DN HS T G RGPVL++DY L+EKLAHF RERIPERVVHA+GA AKG+F+ T D+S  T A +F   G +TP+I RFS V
Sbjct:    5 LTTNEGQP-WADNQHSQTAGQRGPVLIQDYQLLEKLAHFNRERIPERVVHAKGAGAKGYFKVTKDMSAYTKAAVFSGVGKKTPLITRFSQV 94          
BLAST of CX287631 vs. ExPASy Swiss-Prot
Match: CATA_BACSU (Vegetative catalase OS=Bacillus subtilis GN=katA PE=1 SV=5)

HSP 1 Score: 110.538 bits (275), Expect = 2.620e-24
Identity = 51/90 (56.67%), Postives = 69/90 (76.67%), Query Frame = 3
Query:  123 MTTNAGAPVWNDNHSLTVGSRGPVLLEDYHLVEKLAHFARERIPERVVHARGASAKGFFECTHDISHLTCADLFRAPGVQTPVIVRFSTV 392
            +TT+ GAPV ++ +S+T GSRGP L++D HL+EKLAHF RER+PERVVHA+GA A G+FE T+D++  T A      G +TP+ +RFSTV
Sbjct:    6 LTTSWGAPVGDNQNSMTAGSRGPTLIQDVHLLEKLAHFNRERVPERVVHAKGAGAHGYFEVTNDVTKYTKAAFLSEVGKRTPLFIRFSTV 95          
BLAST of CX287631 vs. ExPASy Swiss-Prot
Match: CATA_TOXGO (Peroxisomal catalase OS=Toxoplasma gondii PE=2 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 5.836e-24
Identity = 52/92 (56.52%), Postives = 67/92 (72.83%), Query Frame = 3
Query:  117 PFMTTNAGAPVWNDNHSLTVGSRGPVLLEDYHLVEKLAHFARERIPERVVHARGASAKGFFECTHDISHLTCADLFRAPGVQTPVIVRFSTV 392
            P +TT+AG PV ++ +S+T G  GP +L ++HL++KLAHF RERIPERVVHA+G  A G+FE THDI+    A LF   G +TPV  RFSTV
Sbjct:   14 PVITTSAGNPVDDNQNSVTAGPYGPAILSNFHLIDKLAHFDRERIPERVVHAKGGGAFGYFEVTHDITRFCKAKLFEKIGKRTPVFARFSTV 105          
BLAST of CX287631 vs. ExPASy Swiss-Prot
Match: CATA_BORPE (Catalase OS=Bordetella pertussis GN=katA PE=1 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 5.836e-24
Identity = 54/90 (60.00%), Postives = 67/90 (74.44%), Query Frame = 3
Query:  123 MTTNAGAPVWNDNHSLTVGSRGPVLLEDYHLVEKLAHFARERIPERVVHARGASAKGFFECTHDISHLTCADLFRAPGVQTPVIVRFSTV 392
            +TT AGAPV ++N+++T G RGP LL+D   +EKLAHF RERIPERVVHA+G+ A G F  THDIS  T A +F   G QTP+ +RFSTV
Sbjct:    9 LTTAAGAPVADNNNTMTAGPRGPALLQDVWFLEKLAHFDRERIPERVVHAKGSGAYGTFTVTHDISRYTRARIFAEVGKQTPLFLRFSTV 98          
BLAST of CX287631 vs. ExPASy Swiss-Prot
Match: CATA_BORPA (Catalase OS=Bordetella parapertussis GN=katA PE=3 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 5.836e-24
Identity = 54/90 (60.00%), Postives = 67/90 (74.44%), Query Frame = 3
Query:  123 MTTNAGAPVWNDNHSLTVGSRGPVLLEDYHLVEKLAHFARERIPERVVHARGASAKGFFECTHDISHLTCADLFRAPGVQTPVIVRFSTV 392
            +TT AGAPV ++N+++T G RGP LL+D   +EKLAHF RERIPERVVHA+G+ A G F  THDIS  T A +F   G QTP+ +RFSTV
Sbjct:    9 LTTAAGAPVADNNNTMTAGPRGPALLQDVWFLEKLAHFDRERIPERVVHAKGSGAYGTFTVTHDISRYTRARIFAEVGKQTPLFLRFSTV 98          
BLAST of CX287631 vs. ExPASy Swiss-Prot
Match: CATA_BORBR (Catalase OS=Bordetella bronchiseptica GN=katA PE=3 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 5.836e-24
Identity = 54/90 (60.00%), Postives = 67/90 (74.44%), Query Frame = 3
Query:  123 MTTNAGAPVWNDNHSLTVGSRGPVLLEDYHLVEKLAHFARERIPERVVHARGASAKGFFECTHDISHLTCADLFRAPGVQTPVIVRFSTV 392
            +TT AGAPV ++N+++T G RGP LL+D   +EKLAHF RERIPERVVHA+G+ A G F  THDIS  T A +F   G QTP+ +RFSTV
Sbjct:    9 LTTAAGAPVADNNNTMTAGPRGPALLQDVWFLEKLAHFDRERIPERVVHAKGSGAYGTFTVTHDISRYTRARIFAEVGKQTPLFLRFSTV 98          
BLAST of CX287631 vs. ExPASy Swiss-Prot
Match: CATE_RHIME (Catalase C OS=Rhizobium meliloti GN=katE PE=2 SV=2)

HSP 1 Score: 108.227 bits (269), Expect = 1.300e-23
Identity = 52/94 (55.32%), Postives = 63/94 (67.02%), Query Frame = 3
Query:  111 NAPFMTTNAGAPVWNDNHSLTVGSRGPVLLEDYHLVEKLAHFARERIPERVVHARGASAKGFFECTHDISHLTCADLFRAPGVQTPVIVRFSTV 392
            + P +TT  G PV +D +SL  G RGP L+ED+H  EK+ HF  ERIPERVVHARG    GFFE    ++  T ADLF+ PG +TP  VRFSTV
Sbjct:   36 DTPVLTTAQGGPVADDQNSLRAGERGPTLIEDFHFREKIFHFDHERIPERVVHARGYGVHGFFETYESLAAYTRADLFQRPGERTPAFVRFSTV 129          
BLAST of CX287631 vs. ExPASy Swiss-Prot
Match: CATA_ASCSU (Catalase OS=Ascaris suum GN=CAT PE=2 SV=2)

HSP 1 Score: 108.227 bits (269), Expect = 1.300e-23
Identity = 53/93 (56.99%), Postives = 69/93 (74.19%), Query Frame = 3
Query:  117 PF-MTTNAGAPVWNDNHSLTVGSRGPVLLEDYHLVEKLAHFARERIPERVVHARGASAKGFFECTHDISHLTCADLFRAPGVQTPVIVRFSTV 392
            PF +TT+ GAP++N   SLTVG RGP+LL+D   ++++AHF RERIPERVVHA+G  A GFFE T DI+    AD+F   G +TP+ +RFSTV
Sbjct:   23 PFVLTTSNGAPIFNKKASLTVGPRGPLLLQDVVFLDEMAHFDRERIPERVVHAKGGGAHGFFEVTDDITKYCKADVFSTIGKRTPIFIRFSTV 115          
BLAST of CX287631 vs. ExPASy Swiss-Prot
Match: CATA1_CAEEL (Peroxisomal catalase 1 OS=Caenorhabditis elegans GN=ctl-2 PE=2 SV=3)

HSP 1 Score: 108.227 bits (269), Expect = 1.300e-23
Identity = 50/90 (55.56%), Postives = 68/90 (75.56%), Query Frame = 3
Query:  123 MTTNAGAPVWNDNHSLTVGSRGPVLLEDYHLVEKLAHFARERIPERVVHARGASAKGFFECTHDISHLTCADLFRAPGVQTPVIVRFSTV 392
            +TT+ GAP+++    LT G RGP+L++D   ++++AHF RERIPERVVHA+GA A G+FE THDIS    AD+F   G QTP+++RFSTV
Sbjct:   23 ITTSNGAPIYSKTAVLTAGRRGPMLMQDVVYMDEMAHFDRERIPERVVHAKGAGAHGYFEVTHDISKYCKADIFNKVGKQTPLLIRFSTV 112          
The following BLAST results are available for this feature:
BLAST of CX287631 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 141
Match NameE-valueIdentityDescription
CATA_SECCE1.582e-3768.52Catalase OS=Secale cereale PE=2 SV=1[more]
CATA_LACSK1.536e-2462.64Catalase OS=Lactobacillus sakei GN=katA PE=3 SV=2[more]
CATA_BACSU2.620e-2456.67Vegetative catalase OS=Bacillus subtilis GN=katA P... [more]
CATA_TOXGO5.836e-2456.52Peroxisomal catalase OS=Toxoplasma gondii PE=2 SV=... [more]
CATA_BORPE5.836e-2460.00Catalase OS=Bordetella pertussis GN=katA PE=1 SV=1[more]
CATA_BORPA5.836e-2460.00Catalase OS=Bordetella parapertussis GN=katA PE=3 ... [more]
CATA_BORBR5.836e-2460.00Catalase OS=Bordetella bronchiseptica GN=katA PE=3... [more]
CATE_RHIME1.300e-2355.32Catalase C OS=Rhizobium meliloti GN=katE PE=2 SV=2[more]
CATA_ASCSU1.300e-2356.99Catalase OS=Ascaris suum GN=CAT PE=2 SV=2[more]
CATA1_CAEEL1.300e-2355.56Peroxisomal catalase 1 OS=Caenorhabditis elegans G... [more]

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Properties
Property NameValue
Genbank descriptionC01011F07SK Veg1 Citrus clementina cDNA clone C01011F07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX287631 ID=CX287631; Name=CX287631; organism=Citrus clementina; type=EST; length=399bp
TCTCGACTCAACTCCACTTCTCCTTTCTTACGATAATAATAACAGTAGCA
AAATCTTCAGCAAGAAATATCGCCATGGATCCCTACAAATTGCTTCCGTC
AACTACTCACAATGCCCCCTTTATGACTACAAATGCCGGCGCTCCTGTCT
GGAACGACAATCACTCCTTGACTGTTGGAAGTAGAGGTCCTGTCCTTCTT
GAGGATTATCATCTGGTGGAGAAACTAGCTCATTTTGCCAGGGAGAGGAT
TCCAGAACGTGTCGTCCATGCTAGGGGAGCCAGTGCTAAGGGTTTCTTTG
AGTGCACCCATGATATTTCTCACCTTACTTGTGCTGATCTTTTTCGAGCT
CCAGGGGTTCAGACACCTGTCATTGTTCGCTTCTCCACTGTTATCCATG
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