CX287637

Overview
NameCX287637
Unique NameCX287637
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length429
Libraries
Library NameType
Veg1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX287637 vs. ExPASy Swiss-Prot
Match: YBY9_YEAST (Putative serine carboxypeptidase YBR139W OS=Saccharomyces cerevisiae GN=YBR139W PE=1 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 1.621e-11
Identity = 31/74 (41.89%), Postives = 46/74 (62.16%), Query Frame = 1
Query:  208 TGYVGVGESGDAQLFYYFVKSEKNPREDPLLLWLTGGPGCSAFSGLAYEIGPINFNVVEYNGSLPTLHLNPYSW 429
            +GY+   +S     FY+F +S  +P  DP++LWL GGPGCS+F+GL +E+GP +         +  +H NPYSW
Sbjct:   95 SGYMDYKDS--KHFFYWFFESRNDPANDPIILWLNGGPGCSSFTGLLFELGPSSI-----GADMKPIH-NPYSW 160          
BLAST of CX287637 vs. ExPASy Swiss-Prot
Match: SCP24_ARATH (Serine carboxypeptidase 24 OS=Arabidopsis thaliana GN=SCPL24 PE=1 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 2.117e-11
Identity = 39/92 (42.39%), Postives = 52/92 (56.52%), Query Frame = 1
Query:  160 VKFLPGFQGPLPFELETGYVGVGESGDAQLFYYFVKSEK-NPREDPLLLWLTGGPGCSAFS-GLAYEIGPINFNVVEYNGSLPTLHLNPYSW 429
            +K LPG Q  + F   +GYV V +S    LFY+  +S   +P   PLLLWL GGPGCS+ + G + EIGP   N    N     L+LN ++W
Sbjct:   33 IKALPG-QPKVAFSQYSGYVNVNQSHGRALFYWLTESSSPSPHTKPLLLWLNGGPGCSSIAYGASEEIGPFRINKTGSN-----LYLNKFAW 118          
BLAST of CX287637 vs. ExPASy Swiss-Prot
Match: CBPY_SCHPO (Carboxypeptidase Y OS=Schizosaccharomyces pombe GN=cpy1 PE=1 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 2.764e-11
Identity = 31/74 (41.89%), Postives = 45/74 (60.81%), Query Frame = 1
Query:  208 TGYVGVGESGDAQLFYYFVKSEKNPREDPLLLWLTGGPGCSAFSGLAYEIGPINFNVVEYNGSLPTLHLNPYSW 429
            TGY+ V +  D  LF++F +S  +P  DP++LWL GGPGCS+ +GL  E+GP + N+            NP+SW
Sbjct:  590 TGYLDVED--DRHLFFWFFESRNDPENDPVVLWLNGGPGCSSLTGLFMELGPSSINIETLKP-----EYNPHSW 656          
BLAST of CX287637 vs. ExPASy Swiss-Prot
Match: CBPY_PICPG (Carboxypeptidase Y OS=Pichia pastoris (strain GS115) GN=PRC1 PE=1 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 2.764e-11
Identity = 32/74 (43.24%), Postives = 47/74 (63.51%), Query Frame = 1
Query:  208 TGYVGVGESGDAQLFYYFVKSEKNPREDPLLLWLTGGPGCSAFSGLAYEIGPINFNVVEYNGSLPTLHLNPYSW 429
            +GY+ V E+ D   FY+F +S  +P+ DP++LWL GGPGCS+ +GL +E+G         N +L  +  NPYSW
Sbjct:  124 SGYLDV-EADDKHFFYWFFESRNDPQNDPIILWLNGGPGCSSLTGLFFELGSSRI-----NENLKPI-FNPYSW 190          
BLAST of CX287637 vs. ExPASy Swiss-Prot
Match: PPGB_MOUSE (Lysosomal protective protein OS=Mus musculus GN=Ctsa PE=1 SV=1)

HSP 1 Score: 67.0106 bits (162), Expect = 3.610e-11
Identity = 35/96 (36.46%), Postives = 52/96 (54.17%), Query Frame = 1
Query:  142 AASYSTVKFLPGFQGPLPFELETGYVGVGESGDAQLFYYFVKSEKNPREDPLLLWLTGGPGCSAFSGLAYEIGPINFNVVEYNGSLPTLHLNPYSW 429
            A     +  LPG      F   +GY+   +S      Y+FV+S+ +P+  P++LWL GGPGCS+  GL  E GP    +++ +G   TL  NPY+W
Sbjct:   24 APDQDEIDCLPGLAKQPSFRQYSGYLRASDS--KHFHYWFVESQNDPKNSPVVLWLNGGPGCSSLDGLLTEHGPF---LIQPDG--VTLEYNPYAW 112          
BLAST of CX287637 vs. ExPASy Swiss-Prot
Match: CBPY_CANAL (Carboxypeptidase Y OS=Candida albicans GN=CPY1 PE=2 SV=2)

HSP 1 Score: 67.0106 bits (162), Expect = 3.610e-11
Identity = 31/74 (41.89%), Postives = 49/74 (66.22%), Query Frame = 1
Query:  208 TGYVGVGESGDAQLFYYFVKSEKNPREDPLLLWLTGGPGCSAFSGLAYEIGPINFNVVEYNGSLPTLHLNPYSW 429
            +GY+ V +  D   FYYF +S  +P+ DP++LWL GGPGCS+ +GL +E+GP +      + +L  ++ NP+SW
Sbjct:  144 SGYLDVVDE-DKHFFYYFFESRNDPKNDPVILWLNGGPGCSSLTGLFFELGPSSI-----DKNLKPVY-NPHSW 210          
BLAST of CX287637 vs. ExPASy Swiss-Prot
Match: SCP22_ARATH (Serine carboxypeptidase-like 22 OS=Arabidopsis thaliana GN=SCPL22 PE=2 SV=1)

HSP 1 Score: 66.6254 bits (161), Expect = 4.715e-11
Identity = 40/92 (43.48%), Postives = 52/92 (56.52%), Query Frame = 1
Query:  160 VKFLPGFQGPLPFELETGYVGVGESGDAQLFYYFVKSEKN-PREDPLLLWLTGGPGCSAFS-GLAYEIGPINFNVVEYNGSLPTLHLNPYSW 429
            +K LPG Q  + F   +GYV V ES    LFY+  +S  + P   PLLLWL GGPGCS+ + G + EIGP   +    N     L+LN +SW
Sbjct:   31 IKALPG-QPKVGFSQFSGYVTVNESHGRSLFYWLTESSSHSPHTKPLLLWLNGGPGCSSIAYGASEEIGPFRISKTGCN-----LYLNNFSW 116          
BLAST of CX287637 vs. ExPASy Swiss-Prot
Match: SCP37_ARATH (Serine carboxypeptidase-like 37 OS=Arabidopsis thaliana GN=SCPL37 PE=2 SV=2)

HSP 1 Score: 65.855 bits (159), Expect = 8.043e-11
Identity = 36/90 (40.00%), Postives = 45/90 (50.00%), Query Frame = 1
Query:  160 VKFLPGFQGPLPFELETGYVGVGESGDAQLFYYFVKSEKNPREDPLLLWLTGGPGCSAFSGLAYEIGPINFNVVEYNGSLPTLHLNPYSW 429
            +K LPG    + F    GYV V E     L+YYFV++ K     PL++W  GGP CS+  G   E+GP     V   G    L  NPYSW
Sbjct:   65 IKKLPGQPSGVSFRQYGGYVPVNEPSSRFLYYYFVEAIKPNTSTPLVIWFNGGPACSSLGGAFLELGPFR---VHSGGR--KLFRNPYSW 149          
The following BLAST results are available for this feature:
BLAST of CX287637 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 48
Match NameE-valueIdentityDescription
YBY9_YEAST1.621e-1141.89Putative serine carboxypeptidase YBR139W OS=Saccha... [more]
SCP24_ARATH2.117e-1142.39Serine carboxypeptidase 24 OS=Arabidopsis thaliana... [more]
CBPY_SCHPO2.764e-1141.89Carboxypeptidase Y OS=Schizosaccharomyces pombe GN... [more]
CBPY_PICPG2.764e-1143.24Carboxypeptidase Y OS=Pichia pastoris (strain GS11... [more]
PPGB_MOUSE3.610e-1136.46Lysosomal protective protein OS=Mus musculus GN=Ct... [more]
CBPY_CANAL3.610e-1141.89Carboxypeptidase Y OS=Candida albicans GN=CPY1 PE=... [more]
SCP22_ARATH4.715e-1143.48Serine carboxypeptidase-like 22 OS=Arabidopsis tha... [more]
SCP37_ARATH8.043e-1140.00Serine carboxypeptidase-like 37 OS=Arabidopsis tha... [more]

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Properties
Property NameValue
Genbank descriptionC01011G01SK Veg1 Citrus clementina cDNA clone C01011G01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX287637 ID=CX287637; Name=CX287637; organism=Citrus clementina; type=EST; length=429bp
AGATTGTTCGCTAGTTGTTTCTCAAAGAAACTGGTTGGTTAAGACTTAAG
AGGCTGGAAAAGCCGAAAACAAACGCCAATGGACAAGCTTTGTTTTCCTC
TTCTTCTTCTTCTTCTTCTTGTACAGCTTTGCATGCAGCTTGCAGCTTCT
TACTCAACTGTTAAATTTCTTCCGGGATTCCAGGGCCCCCTCCCCTTTGA
ACTTGAAACTGGGTATGTAGGAGTAGGTGAGTCGGGGGACGCACAGCTCT
TCTATTACTTTGTGAAGTCGGAGAAAAATCCAAGAGAGGACCCTCTCTTG
CTTTGGCTTACTGGTGGCCCTGGCTGCTCTGCCTTCTCAGGTCTTGCTTA
TGAAATTGGTCCAATAAATTTCAACGTAGTGGAGTACAACGGGAGCTTGC
CTACTTTGCACTTGAATCCCTACTCATGG
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