CX288497
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX288497 vs. ExPASy Swiss-Prot
Match: IAA5_ORYSJ (Auxin-responsive protein IAA5 OS=Oryza sativa subsp. japonica GN=IAA5 PE=2 SV=1) HSP 1 Score: 160.614 bits (405), Expect = 4.928e-39 Identity = 79/138 (57.25%), Postives = 98/138 (71.01%), Query Frame = 2 Query: 2 KNSLATS-SKNNDEVDGKAGSSALLVKVSMDGAPYLRKVDLKNYSKYQELSSALEKMFSCFTIGQYGSHGALGREMLSESKLKDLLHGSEFVLTYEDKDGDWMLVGDVPWEMFIGTCKRLRIMKSTDAIGLAPRAVEK 412 KN+LA S SK E G A L VKVSMDGAPYLRKVDLK YS Y++LS ALEKMFSCF GQ G + R+ L+ D L E+VLTYEDKD DWMLVGD+PW++F C++L+IM+ +DA G+APR++E+ Sbjct: 129 KNTLAASASKGKGEDKGTAEGGPLYVKVSMDGAPYLRKVDLKMYSSYEDLSMALEKMFSCFITGQSGLRKSSNRDRLTNGSKADALQDQEYVLTYEDKDADWMLVGDLPWDLFTTICRKLKIMRGSDAAGIAPRSIEQ 266
BLAST of CX288497 vs. ExPASy Swiss-Prot
Match: IAA5_ORYSI (Auxin-responsive protein IAA5 OS=Oryza sativa subsp. indica GN=IAA5 PE=2 SV=2) HSP 1 Score: 160.614 bits (405), Expect = 4.928e-39 Identity = 79/138 (57.25%), Postives = 98/138 (71.01%), Query Frame = 2 Query: 2 KNSLATS-SKNNDEVDGKAGSSALLVKVSMDGAPYLRKVDLKNYSKYQELSSALEKMFSCFTIGQYGSHGALGREMLSESKLKDLLHGSEFVLTYEDKDGDWMLVGDVPWEMFIGTCKRLRIMKSTDAIGLAPRAVEK 412 KN+LA S SK E G A L VKVSMDGAPYLRKVDLK YS Y++LS ALEKMFSCF GQ G + R+ L+ D L E+VLTYEDKD DWMLVGD+PW++F C++L+IM+ +DA G+APR++E+ Sbjct: 130 KNTLAASASKGKGEDKGTAEGGPLYVKVSMDGAPYLRKVDLKMYSSYEDLSMALEKMFSCFITGQSGLRKSSNRDRLTNGSKADALQDQEYVLTYEDKDADWMLVGDLPWDLFTTICRKLKIMRGSDAAGIAPRSIEQ 267
BLAST of CX288497 vs. ExPASy Swiss-Prot
Match: IAA17_ARATH (Auxin-responsive protein IAA17 OS=Arabidopsis thaliana GN=IAA17 PE=1 SV=2) HSP 1 Score: 158.303 bits (399), Expect = 2.446e-38 Identity = 74/118 (62.71%), Postives = 94/118 (79.66%), Query Frame = 2 Query: 62 SALLVKVSMDGAPYLRKVDLKNYSKYQELSSALEKMFSCFTIGQYGSHGALGREMLSESKLKDLLHGSEFVLTYEDKDGDWMLVGDVPWEMFIGTCKRLRIMKSTDAIGLAPRAVEKC 415 +A VKVSMDGAPYLRK+DL+ Y Y ELS+AL MFS FT+G++G + + ++E KL DL++ ++V +YEDKDGDWMLVGDVPW MF+ TCKRLR+MK +DAIGLAPRA+EKC Sbjct: 109 AAAFVKVSMDGAPYLRKIDLRMYKSYDELSNALSNMFSSFTMGKHGGEEGM-IDFMNERKLMDLVNSWDYVPSYEDKDGDWMLVGDVPWPMFVDTCKRLRLMKGSDAIGLAPRAMEKC 225
BLAST of CX288497 vs. ExPASy Swiss-Prot
Match: IAA17_ORYSJ (Auxin-responsive protein IAA17 OS=Oryza sativa subsp. japonica GN=IAA17 PE=2 SV=1) HSP 1 Score: 157.918 bits (398), Expect = 3.194e-38 Identity = 85/139 (61.15%), Postives = 102/139 (73.38%), Query Frame = 2 Query: 2 KNSLATSS--KNNDEVDGKAGSSALLVKVSMDGAPYLRKVDLKNYSKYQELSSALEKMFSCFTIGQYGSHGALGREMLSESKLKDLLHGSEFVLTYEDKDGDWMLVGDVPWEMFIGTCKRLRIMKSTDAIGLAPRAVEK 412 KN++AT+ + ++ + K G L VKVSMDGAPYLRKVDLK Y Y++LS+ALEKMF FT G+ G LSES+ KD E+VLTYEDKDGDWMLVGDVPWEMF +C+RLRIMK +DAIGLAPRAV+K Sbjct: 128 KNTMATNQLKSSKEDAEAKQGQGFLYVKVSMDGAPYLRKVDLKTYKNYKDLSTALEKMFIGFTTGKDG---------LSESR-KD----GEYVLTYEDKDGDWMLVGDVPWEMFANSCRRLRIMKGSDAIGLAPRAVDK 252
BLAST of CX288497 vs. ExPASy Swiss-Prot
Match: IAA11_ORYSJ (Auxin-responsive protein IAA11 OS=Oryza sativa subsp. japonica GN=IAA11 PE=2 SV=1) HSP 1 Score: 154.836 bits (390), Expect = 2.704e-37 Identity = 77/118 (65.25%), Postives = 93/118 (78.81%), Query Frame = 2 Query: 62 SALLVKVSMDGAPYLRKVDLKNYSKYQELSSALEKMFSCFTIGQYGSHGALGREMLSESKLKDLLHGSEFVLTYEDKDGDWMLVGDVPWEMFIGTCKRLRIMKSTDAIGLAPRAVEKC 415 +A LVKVSMDGAPYLRK+D+ Y Y ELS A + MF+ FTIG+ GSH +++ +KL+D L E+V TYEDKDGDWMLVGDVPWEMF+ +CKRLRIMK ++AIGLAPRAVEKC Sbjct: 121 AAALVKVSMDGAPYLRKIDVAMYKSYPELSMAFQNMFTSFTIGKCGSH----QQLKESNKLRDDL---EYVPTYEDKDGDWMLVGDVPWEMFVESCKRLRIMKGSEAIGLAPRAVEKC 231
BLAST of CX288497 vs. ExPASy Swiss-Prot
Match: IAA3_ORYSJ (Auxin-responsive protein IAA3 OS=Oryza sativa subsp. japonica GN=IAA3 PE=2 SV=1) HSP 1 Score: 152.91 bits (385), Expect = 1.028e-36 Identity = 81/139 (58.27%), Postives = 96/139 (69.06%), Query Frame = 2 Query: 2 KNSLATSS--KNNDEVDGKAGSSALLVKVSMDGAPYLRKVDLKNYSKYQELSSALEKMFSCFTIGQYGSHGALGREMLSESKLKDLLHGSEFVLTYEDKDGDWMLVGDVPWEMFIGTCKRLRIMKSTDAIGLAPRAVEK 412 KN++AT+ N ++VD K G L VKVSMDGAPYLRKVDLK Y Y+++S LEKMF F+ G+ G+ KD E+VLTYEDKDGDWMLVGDVPWEMF +C+RLRIMK +DAIGLAPRA EK Sbjct: 135 KNTMATNQIKSNKEDVDAKQGQGFLYVKVSMDGAPYLRKVDLKTYKNYKDMSLGLEKMFIGFSTGKEGAENQ-----------KD----GEYVLTYEDKDGDWMLVGDVPWEMFTDSCRRLRIMKGSDAIGLAPRAGEK 258
BLAST of CX288497 vs. ExPASy Swiss-Prot
Match: IAA13_ORYSJ (Auxin-responsive protein IAA13 OS=Oryza sativa subsp. japonica GN=IAA13 PE=2 SV=1) HSP 1 Score: 139.428 bits (350), Expect = 1.176e-32 Identity = 73/137 (53.28%), Postives = 91/137 (66.42%), Query Frame = 2 Query: 2 KNSLATSSKNNDEVDGKAGSSALLVKVSMDGAPYLRKVDLKNYSKYQELSSALEKMFSCFTIGQYGSHGALGREMLSESKLKDLLHGSEFVLTYEDKDGDWMLVGDVPWEMFIGTCKRLRIMKSTDAIGLAPRAVEK 412 K A + + +S+ VKVSMDGAPYLRKVDLK Y+ Y++LS AL+KMF FT A G M + ++GS+ V TYEDKDGDWMLVGDVPW+MF+ +CKRLRIMK ++AIGLAPRA +K Sbjct: 110 KEEEADKQQQQPAANASGSNSSAFVKVSMDGAPYLRKVDLKMYNSYKDLSLALQKMFGTFT--------ATGNNM-------NEVNGSDAVTTYEDKDGDWMLVGDVPWQMFVESCKRLRIMKGSEAIGLAPRAKDK 231
BLAST of CX288497 vs. ExPASy Swiss-Prot
Match: IAA13_ORYSI (Auxin-responsive protein IAA13 OS=Oryza sativa subsp. indica GN=IAA13 PE=2 SV=1) HSP 1 Score: 139.428 bits (350), Expect = 1.176e-32 Identity = 73/137 (53.28%), Postives = 91/137 (66.42%), Query Frame = 2 Query: 2 KNSLATSSKNNDEVDGKAGSSALLVKVSMDGAPYLRKVDLKNYSKYQELSSALEKMFSCFTIGQYGSHGALGREMLSESKLKDLLHGSEFVLTYEDKDGDWMLVGDVPWEMFIGTCKRLRIMKSTDAIGLAPRAVEK 412 K A + + +S+ VKVSMDGAPYLRKVDLK Y+ Y++LS AL+KMF FT A G M + ++GS+ V TYEDKDGDWMLVGDVPW+MF+ +CKRLRIMK ++AIGLAPRA +K Sbjct: 110 KEEEADKQQQQPAANASGSNSSAFVKVSMDGAPYLRKVDLKMYNSYKDLSLALQKMFGTFT--------ATGNNM-------NEVNGSDAVTTYEDKDGDWMLVGDVPWQMFVESCKRLRIMKGSEAIGLAPRAKDK 231
BLAST of CX288497 vs. ExPASy Swiss-Prot
Match: IAA1_ORYSJ (Auxin-responsive protein IAA1 OS=Oryza sativa subsp. japonica GN=IAA1 PE=2 SV=1) HSP 1 Score: 133.265 bits (334), Expect = 8.426e-31 Identity = 68/121 (56.20%), Postives = 88/121 (72.73%), Query Frame = 2 Query: 50 KAGSSALLVKVSMDGAPYLRKVDLKNYSKYQELSSALE-KMFSCFTIGQYGSHGALGREMLSESKLKDLLHGSEFVLTYEDKDGDWMLVGDVPWEMFIGTCKRLRIMKSTDAIGLAPRAVE 409 K +A VKV++DGAPYLRKVDL+ YS Y +L AL+ K FS FTI ++ E KL D ++G+E+V TYEDKDGDWMLVGDVPW+MF+ TC+RLR+MKS++A+ LAPRA + Sbjct: 88 KNALAAKFVKVAVDGAPYLRKVDLEAYSGYDQLLRALQDKFFSHFTIRKFAD---------DERKLVDAVNGTEYVPTYEDKDGDWMLVGDVPWKMFVETCQRLRLMKSSEAVNLAPRAAQ 199
BLAST of CX288497 vs. ExPASy Swiss-Prot
Match: IAA15_ORYSJ (Auxin-responsive protein IAA15 OS=Oryza sativa subsp. japonica GN=IAA15 PE=2 SV=1) HSP 1 Score: 131.724 bits (330), Expect = 2.452e-30 Identity = 67/118 (56.78%), Postives = 87/118 (73.73%), Query Frame = 2 Query: 53 AGSSALLVKVSMDGAPYLRKVDLKNYSKYQELSSALE-KMFSCFTIGQYGSHGALGREMLSESKLKDLLHGSEFVLTYEDKDGDWMLVGDVPWEMFIGTCKRLRIMKSTDAIGLAPRA 403 + S A VKV++DGAPYLRKVDL+ Y Y +L +AL+ K FS FTI + G+ E KL D + G+E+V TYEDKDGDWMLVGDVPW+MF+ TC+RLR+MKS++A+ LAPR+ Sbjct: 103 SSSKAKFVKVAVDGAPYLRKVDLEAYRGYDQLLAALQDKFFSHFTIRKLGNE---------EMKLVDAVSGNEYVPTYEDKDGDWMLVGDVPWKMFVETCQRLRLMKSSEAVNLAPRS 211 The following BLAST results are available for this feature:
BLAST of CX288497 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 66
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CX288497 ID=CX288497; Name=CX288497; organism=Citrus clementina; type=EST; length=575bpback to top |