CX288505
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX288505 vs. ExPASy Swiss-Prot
Match: PABP1_MOUSE (Polyadenylate-binding protein 1 OS=Mus musculus GN=Pabpc1 PE=1 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 1.040e-15 Identity = 40/85 (47.06%), Postives = 64/85 (75.29%), Query Frame = 1 Query: 94 PITALSTALANASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPEALKAKVAEAMEVLRSVAQQQANNPA 348 P+TA + LA+A P++Q+ +LGE L+PL++ + A K+TGMLLE+D +E+LH+LESPE+L++KV EA+ VL++ ++A A Sbjct: 544 PLTA--SMLASAPPQEQKQMLGERLFPLIQAMHPSLAGKITGMLLEIDNSELLHMLESPESLRSKVDEAVAVLQAHQAKEAAQKA 626
BLAST of CX288505 vs. ExPASy Swiss-Prot
Match: PABP1_PONAB (Polyadenylate-binding protein 1 OS=Pongo abelii GN=PABPC1 PE=2 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 1.359e-15 Identity = 40/85 (47.06%), Postives = 64/85 (75.29%), Query Frame = 1 Query: 94 PITALSTALANASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPEALKAKVAEAMEVLRSVAQQQANNPA 348 P+TA + LA+A P++Q+ +LGE L+PL++ + A K+TGMLLE+D +E+LH+LESPE+L++KV EA+ VL++ ++A A Sbjct: 544 PLTA--SMLASAPPQEQKQMLGERLFPLIQAMHPTLAGKITGMLLEIDNSELLHMLESPESLRSKVDEAVAVLQAHQAKEAAQKA 626
BLAST of CX288505 vs. ExPASy Swiss-Prot
Match: PABP1_HUMAN (Polyadenylate-binding protein 1 OS=Homo sapiens GN=PABPC1 PE=1 SV=2) HSP 1 Score: 82.0333 bits (201), Expect = 1.359e-15 Identity = 40/85 (47.06%), Postives = 64/85 (75.29%), Query Frame = 1 Query: 94 PITALSTALANASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPEALKAKVAEAMEVLRSVAQQQANNPA 348 P+TA + LA+A P++Q+ +LGE L+PL++ + A K+TGMLLE+D +E+LH+LESPE+L++KV EA+ VL++ ++A A Sbjct: 544 PLTA--SMLASAPPQEQKQMLGERLFPLIQAMHPTLAGKITGMLLEIDNSELLHMLESPESLRSKVDEAVAVLQAHQAKEAAQKA 626
BLAST of CX288505 vs. ExPASy Swiss-Prot
Match: PABP1_BOVIN (Polyadenylate-binding protein 1 OS=Bos taurus GN=PABPC1 PE=2 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 1.359e-15 Identity = 40/85 (47.06%), Postives = 64/85 (75.29%), Query Frame = 1 Query: 94 PITALSTALANASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPEALKAKVAEAMEVLRSVAQQQANNPA 348 P+TA + LA+A P++Q+ +LGE L+PL++ + A K+TGMLLE+D +E+LH+LESPE+L++KV EA+ VL++ ++A A Sbjct: 544 PLTA--SMLASAPPQEQKQMLGERLFPLIQAMHPTLAGKITGMLLEIDNSELLHMLESPESLRSKVDEAVAVLQAHQAKEAAQKA 626
BLAST of CX288505 vs. ExPASy Swiss-Prot
Match: EPABA_XENLA (Embryonic polyadenylate-binding protein A OS=Xenopus laevis GN=epabp-A PE=1 SV=2) HSP 1 Score: 81.6481 bits (200), Expect = 1.775e-15 Identity = 43/93 (46.24%), Postives = 65/93 (69.89%), Query Frame = 1 Query: 94 PITALSTALANASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPEALKAKVAEAMEVLRSVAQQQANNPADQLASLSL 372 P+TA + LA A P++Q+ +LGE +YP++ ++ A K+TGMLLE+D +E+LH+LESPE+L +KV EA+ VL++ QA A + A SL Sbjct: 541 PLTA--SLLAGAPPQEQKQMLGERIYPVIHEMHPTLAGKITGMLLEIDNSELLHMLESPESLHSKVEEAVAVLQA---HQAKENAQKSAQPSL 628
BLAST of CX288505 vs. ExPASy Swiss-Prot
Match: PABPB_XENLA (Polyadenylate-binding protein 1-B OS=Xenopus laevis GN=pabpc1-B PE=2 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 2.318e-15 Identity = 42/90 (46.67%), Postives = 65/90 (72.22%), Query Frame = 1 Query: 94 PITALSTALANASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPEALKAKVAEAMEVLRSVAQQQANNPADQLAS 363 P+TA + LA A P++Q+ +LGE L+PL++ + A K+TGMLLE+D +E+LH+LESPE+L++KV EA+ VL++ QA A ++ S Sbjct: 542 PLTA--SMLAAAPPQEQKQMLGERLFPLIQAMHPTLAGKITGMLLEIDNSELLHMLESPESLRSKVDEAVAVLQA---HQAKEAAQKVVS 626
BLAST of CX288505 vs. ExPASy Swiss-Prot
Match: PABPA_XENLA (Polyadenylate-binding protein 1-A OS=Xenopus laevis GN=pabpc1-A PE=1 SV=3) HSP 1 Score: 80.4925 bits (197), Expect = 3.953e-15 Identity = 39/81 (48.15%), Postives = 62/81 (76.54%), Query Frame = 1 Query: 94 PITALSTALANASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPEALKAKVAEAMEVLRSVAQQQA 336 P+TA + LA A P++Q+ +LGE L+PL++ + A K+TGMLLE+D +E+LH+LESPE+L++KV EA+ VL++ ++A Sbjct: 542 PLTA--SMLAAAPPQEQKQMLGERLFPLIQAMHPTLAGKITGMLLEIDNSELLHMLESPESLRSKVDEAVAVLQAHQAKEA 620
BLAST of CX288505 vs. ExPASy Swiss-Prot
Match: PABP3_HUMAN (Polyadenylate-binding protein 3 OS=Homo sapiens GN=PABPC3 PE=1 SV=2) HSP 1 Score: 79.7221 bits (195), Expect = 6.744e-15 Identity = 37/83 (44.58%), Postives = 62/83 (74.70%), Query Frame = 1 Query: 100 TALSTALANASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPEALKAKVAEAMEVLRSVAQQQANNPA 348 T ++ LA+A P++Q+ +LGE L+PL++ + A K+TGMLLE+D +E+L++LESPE+L++KV EA+ VL++ ++A A Sbjct: 539 TLTASRLASAPPQKQKQMLGERLFPLIQAMHPTLAGKITGMLLEIDNSELLYMLESPESLRSKVDEAVAVLQAHQAKEATQKA 621
BLAST of CX288505 vs. ExPASy Swiss-Prot
Match: EPABB_XENLA (Embryonic polyadenylate-binding protein B OS=Xenopus laevis GN=epabp-B PE=2 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 1.962e-14 Identity = 43/93 (46.24%), Postives = 64/93 (68.82%), Query Frame = 1 Query: 94 PITALSTALANASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPEALKAKVAEAMEVLRSVAQQQANNPADQLASLSL 372 P+TA + LA A ++Q+ +LGE +YPL+ ++ A K+TGMLLE+D +E+LH+LESPE+L +KV EA+ VL++ QA A + A SL Sbjct: 541 PLTA--SLLAAAPLQEQKQILGERIYPLIHEMHPTLAGKITGMLLEIDNSELLHMLESPESLHSKVEEAVAVLQA---HQAKESAPKSAPQSL 628
BLAST of CX288505 vs. ExPASy Swiss-Prot
Match: PABP_ASPOR (Polyadenylate-binding protein, cytoplasmic and nuclear OS=Aspergillus oryzae GN=pab1 PE=3 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 2.563e-14 Identity = 50/127 (39.37%), Postives = 67/127 (52.76%), Query Frame = 1 Query: 37 PVDMGAGIPRRDASVGQPMPITA---LSTALANASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPEALKAKVAEAMEVL---------RSVAQQQANNPADQLASLSLNEN 381 P G G A G+P A + AL+ A P QQ+ +LGE+LYP ++ + + A K+TGMLLEM+ TE+L LLE EAL+AKV EA+ V S A +A P + S EN Sbjct: 637 PGQGGRGQNAAQAPAGRPEEAVAGGLTAQALSAAPPPQQKQMLGEALYPKIQAQQPELAGKITGMLLEMENTELLSLLEDEEALRAKVDEALNVYDEYMKNKGGESEATGEAAKPKEAAKETSTEEN 763 The following BLAST results are available for this feature:
BLAST of CX288505 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 31
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Sequences
The
following sequences are available for this feature:
EST sequence >CX288505 ID=CX288505; Name=CX288505; organism=Citrus clementina; type=EST; length=467bpback to top |