CX288505
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX288505 vs. ExPASy Swiss-Prot
Match: PABP_ASPCL (Polyadenylate-binding protein, cytoplasmic and nuclear OS=Aspergillus clavatus GN=pab1 PE=3 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 2.169e-13 Identity = 44/104 (42.31%), Postives = 63/104 (60.58%), Query Frame = 1 Query: 49 GAGIPRRDASVGQPMPITALST-ALANASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPEALKAKVAEAMEVLRSVAQQQANN--PAD 351 G + A+ + P AL+ AL A+P QQ+ +LGE+LYP ++ + + A K+TGMLLEMD TE+L LLE +AL+AKV EA+ V + + PAD Sbjct: 633 GQNAAAQPAAGREEAPAGALTAQALNAAAPPQQKQMLGEALYPKIQAQQPELAGKITGMLLEMDNTELLGLLEDDDALRAKVDEALSVYDEYMKNKGEGEAPAD 736
BLAST of CX288505 vs. ExPASy Swiss-Prot
Match: PABP_ASPTN (Polyadenylate-binding protein, cytoplasmic and nuclear OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) GN=pab1 PE=3 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 2.833e-13 Identity = 40/80 (50.00%), Postives = 54/80 (67.50%), Query Frame = 1 Query: 73 ASVGQPMPITALST-ALANASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPEALKAKVAEAMEV 309 A G+ P L+ +LA A QQ+ +LGE+LYP ++ + + A K+TGMLLEMD TE+L LLE EAL+AKV EA+ V Sbjct: 639 AGRGEEAPAAGLTAQSLAAAPAPQQKQMLGEALYPKIQAQQPELAGKITGMLLEMDNTELLSLLEDDEALRAKVDEALSV 718
BLAST of CX288505 vs. ExPASy Swiss-Prot
Match: PABP_ASPFU (Polyadenylate-binding protein, cytoplasmic and nuclear OS=Aspergillus fumigatus GN=pab1 PE=3 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 2.833e-13 Identity = 58/165 (35.15%), Postives = 76/165 (46.06%), Query Frame = 1 Query: 4 FDMGAGSMLPVP-VDMGAGI-----------------PRRDASVGQP-----------MPITALSTA--LANASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPEALKAKVAEAMEVL--------RSVAQQQANNPADQLASLSLNEN 381 F GAG VP + MG GI PR GQP +P T TA L+ P QQ+ +LGE+LYP ++ + + A K+TGMLLEMD E+L LLE EAL+AKV EA+ V A ++ P + A + EN Sbjct: 587 FGRGAGGRGQVPGMPMGQGIRGPGYGQGRGGAPVQGGPRPQGGRGQPAAAPPAAGREEVPATGGLTAQTLSAVPPPQQKQMLGEALYPKIQAQQPELAGKITGMLLEMDNNELLGLLEDEEALRAKVDEALSVYDEYMKNKGEGEAPAESAKPKEDAAETATEEN 751
BLAST of CX288505 vs. ExPASy Swiss-Prot
Match: PABP_NEOFI (Polyadenylate-binding protein, cytoplasmic and nuclear OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / FGSC A1164 / NRRL 181) GN=pab1 PE=3 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 6.312e-13 Identity = 45/98 (45.92%), Postives = 57/98 (58.16%), Query Frame = 1 Query: 55 GIPRRDASVGQP-----------MPITALSTA--LANASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPEALKAKVAEAMEV 309 G PR GQP +P T TA L P QQ+ +LGE+LYP ++ + + A K+TGMLLEMD TE+L LLE EAL+AKV EA+ V Sbjct: 620 GGPRPQGGRGQPAAAPPAAGREEVPATGGLTAQTLNAVPPPQQKQMLGEALYPKIQAQQPELAGKITGMLLEMDNTELLGLLEDEEALRAKVDEALSV 717
BLAST of CX288505 vs. ExPASy Swiss-Prot
Match: PABP_MAGGR (Polyadenylate-binding protein, cytoplasmic and nuclear OS=Magnaporthe grisea GN=PAB1 PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 8.243e-13 Identity = 39/104 (37.50%), Postives = 62/104 (59.62%), Query Frame = 1 Query: 52 AGIPRRDASVGQPMPITALSTALANASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPEALKAKVAEAMEVLRSVAQQQANNPADQLAS 363 AG P G P + A+A+ +P QQ+ +LGE+++P ++ + + A K+TGMLLEMD TE++ L+E+ AL++KV EA+ V +QQ + Q S Sbjct: 651 AGAPAGARGAGAPEGLQGQLAAVAD-NPGQQKQILGEAIFPKIQAIHPELAGKITGMLLEMDNTELVALVENDGALRSKVDEALAVYDDYVRQQGDGEGAQAPS 753
BLAST of CX288505 vs. ExPASy Swiss-Prot
Match: PABP_COCIM (Polyadenylate-binding protein, cytoplasmic and nuclear OS=Coccidioides immitis GN=PAB1 PE=3 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 1.406e-12 Identity = 44/129 (34.11%), Postives = 68/129 (52.71%), Query Frame = 1 Query: 34 VPVDMGAGIPRRDASVGQPMPITALSTALANASPE-------------QQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPEALKAKVAEAMEVLRSVAQQQANNPADQLASLSLNEN 381 +PV G G P + A GQ P A+ NASP QQ+ +LGE++YP ++ + + A K+TGMLLEMD E+L L++ ALKAKV EA+ V + + + + A + +++ Sbjct: 630 MPVQQGMGRPGQ-AGRGQGAPAQAVGQRDENASPNGLTLQVLNAAPPAQQKQMLGEAIYPKIQAQQPELAGKITGMLLEMDNAELLALVDDDAALKAKVDEALTVYDEYVKNKGGDSGEPAADANKSKD 757
BLAST of CX288505 vs. ExPASy Swiss-Prot
Match: PABP_CHAGB (Polyadenylate-binding protein, cytoplasmic and nuclear OS=Chaetomium globosum GN=PAB1 PE=3 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 1.836e-12 Identity = 36/75 (48.00%), Postives = 50/75 (66.67%), Query Frame = 1 Query: 109 STALANASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPEALKAKVAEAMEVLRSVAQQQ 333 S A +P+QQ+ +LGE+L+P ++ L+ D A K+TGMLLEMD E+++LLE AL AKV EAM V + Q Sbjct: 681 SQLTATNNPQQQKQILGENLFPKIQALQPDLAGKITGMLLEMDNAELVNLLEDEAALVAKVNEAMAVYDEYVKSQ 755
BLAST of CX288505 vs. ExPASy Swiss-Prot
Match: PAP1L_HUMAN (Polyadenylate-binding protein 1-like OS=Homo sapiens GN=PABPC1L PE=2 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 2.398e-12 Identity = 36/75 (48.00%), Postives = 54/75 (72.00%), Query Frame = 1 Query: 94 PITALSTALANASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPEALKAKVAEAMEVLRS 318 P+TA + LA A +Q+ ++GE LYPL+ + A K+TGMLLE+D +E+L +LESPE+L AK+ EA+ VL++ Sbjct: 530 PLTA--SMLAAAPLHEQKQMIGERLYPLIHDVHTQLAGKITGMLLEIDNSELLLMLESPESLHAKIDEAVAVLQA 602
BLAST of CX288505 vs. ExPASy Swiss-Prot
Match: PABPX_ARATH (Probable polyadenylate-binding protein At2g36660 OS=Arabidopsis thaliana GN=At2g36660 PE=2 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 4.091e-12 Identity = 45/98 (45.92%), Postives = 57/98 (58.16%), Query Frame = 1 Query: 25 MLPVPVDMGAGIPRRDASVGQPMPITALSTALANASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPEALKAKVAEAMEVLRS 318 MLP+ D R G+ M + E Q LLGE L+PLVE+LE A K+TGMLLEMD++E+L LL+SPE L +V EA EVL+S Sbjct: 488 MLPLSRDFSKQQHSRTYGRGKEMKKSIQQRQSETVGMEMQ--LLGELLHPLVEKLEPQLANKITGMLLEMDKSELLLLLKSPEDLAVRVDEAFEVLKS 583
BLAST of CX288505 vs. ExPASy Swiss-Prot
Match: PABP_PHANO (Polyadenylate-binding protein, cytoplasmic and nuclear OS=Phaeosphaeria nodorum GN=PAB1 PE=3 SV=3) HSP 1 Score: 69.707 bits (169), Expect = 6.979e-12 Identity = 32/66 (48.48%), Postives = 49/66 (74.24%), Query Frame = 1 Query: 112 TALANASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPEALKAKVAEAMEV 309 + L+ A+P QQ+ +LGE+LYP + +++ + A K+TGMLLEMD +E+++L AL+AKV EAM V Sbjct: 653 SVLSAAAPGQQKQMLGEALYPKIHEMQPELAGKITGMLLEMDNSELINLTADESALRAKVDEAMSV 718 The following BLAST results are available for this feature:
BLAST of CX288505 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 31
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Sequences
The
following sequences are available for this feature:
EST sequence >CX288505 ID=CX288505; Name=CX288505; organism=Citrus clementina; type=EST; length=467bpback to top |