CX288506
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX288506 vs. ExPASy Swiss-Prot
Match: NDUS7_GORGO (NADH dehydrogenase [ubiquinone] iron-sulfur protein 7, mitochondrial OS=Gorilla gorilla gorilla GN=NDUFS7 PE=2 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 8.799e-21 Identity = 44/50 (88.00%), Postives = 47/50 (94.00%), Query Frame = 1 Query: 1 GYYHYSYSVVRGCDRIVPVDIYVPGCPPTAEALLYGILQLQKKMNRRRDL 150 GYYHYSYSVVRGCDRIVPVDIY+PGCPPTAEALLYGILQLQ+K+ R R L Sbjct: 158 GYYHYSYSVVRGCDRIVPVDIYIPGCPPTAEALLYGILQLQRKIKRERRL 207
BLAST of CX288506 vs. ExPASy Swiss-Prot
Match: NUOB_RHORT (NADH-quinone oxidoreductase subunit B OS=Rhodospirillum rubrum (strain ATCC 11170 / NCIB 8255) GN=nuoB PE=3 SV=1) HSP 1 Score: 98.5969 bits (244), Expect = 1.149e-20 Identity = 44/51 (86.27%), Postives = 47/51 (92.16%), Query Frame = 1 Query: 1 GYYHYSYSVVRGCDRIVPVDIYVPGCPPTAEALLYGILQLQKKMNRRRDLY 153 GYYHYSYSVVRGCDRIVPVDIYVPGCPPT+EALLYG+LQLQKK+ R LY Sbjct: 134 GYYHYSYSVVRGCDRIVPVDIYVPGCPPTSEALLYGVLQLQKKIKRTGALY 184
BLAST of CX288506 vs. ExPASy Swiss-Prot
Match: NDUS7_MOUSE (NADH dehydrogenase [ubiquinone] iron-sulfur protein 7, mitochondrial OS=Mus musculus GN=Ndufs7 PE=1 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 1.501e-20 Identity = 44/50 (88.00%), Postives = 47/50 (94.00%), Query Frame = 1 Query: 1 GYYHYSYSVVRGCDRIVPVDIYVPGCPPTAEALLYGILQLQKKMNRRRDL 150 GYYHYSYSVVRGCDRIVPVDIYVPGCPPTAEALLYGILQLQ+K+ R + L Sbjct: 169 GYYHYSYSVVRGCDRIVPVDIYVPGCPPTAEALLYGILQLQRKIKREQKL 218
BLAST of CX288506 vs. ExPASy Swiss-Prot
Match: NUOB_ORITI (NADH-quinone oxidoreductase subunit B OS=Orientia tsutsugamushi (strain Ikeda) GN=nuoB PE=3 SV=1) HSP 1 Score: 97.8265 bits (242), Expect = 1.960e-20 Identity = 43/52 (82.69%), Postives = 48/52 (92.31%), Query Frame = 1 Query: 1 GYYHYSYSVVRGCDRIVPVDIYVPGCPPTAEALLYGILQLQKKMNRRRDLYY 156 GYYHYSYSVVRGCD+IVPVDIYVPGCPPT EALLYGILQLQKK+NR + + + Sbjct: 118 GYYHYSYSVVRGCDKIVPVDIYVPGCPPTPEALLYGILQLQKKINRTQQVKF 169
BLAST of CX288506 vs. ExPASy Swiss-Prot
Match: NUOB_ORITB (NADH-quinone oxidoreductase subunit B OS=Orientia tsutsugamushi (strain Boryong) GN=nuoB PE=3 SV=1) HSP 1 Score: 97.8265 bits (242), Expect = 1.960e-20 Identity = 43/52 (82.69%), Postives = 48/52 (92.31%), Query Frame = 1 Query: 1 GYYHYSYSVVRGCDRIVPVDIYVPGCPPTAEALLYGILQLQKKMNRRRDLYY 156 GYYHYSYSVVRGCD+IVPVDIYVPGCPPT EALLYGILQLQKK+NR + + + Sbjct: 118 GYYHYSYSVVRGCDKIVPVDIYVPGCPPTPEALLYGILQLQKKINRTQQVKF 169
BLAST of CX288506 vs. ExPASy Swiss-Prot
Match: NUOB_MAGSM (NADH-quinone oxidoreductase subunit B OS=Magnetococcus sp. (strain MC-1) GN=nuoB PE=3 SV=1) HSP 1 Score: 97.8265 bits (242), Expect = 1.960e-20 Identity = 40/51 (78.43%), Postives = 48/51 (94.12%), Query Frame = 1 Query: 1 GYYHYSYSVVRGCDRIVPVDIYVPGCPPTAEALLYGILQLQKKMNRRRDLY 153 GYYHYSYSVVRGCDRI+PVD+Y+PGCPPTAEA++YGI+QLQKK+NR +Y Sbjct: 110 GYYHYSYSVVRGCDRILPVDVYIPGCPPTAEAVMYGIMQLQKKINREGQVY 160
BLAST of CX288506 vs. ExPASy Swiss-Prot
Match: NDUS7_CAEEL (Probable NADH dehydrogenase [ubiquinone] iron-sulfur protein 7, mitochondrial OS=Caenorhabditis elegans GN=W10D5.2 PE=2 SV=1) HSP 1 Score: 97.8265 bits (242), Expect = 1.960e-20 Identity = 40/49 (81.63%), Postives = 48/49 (97.96%), Query Frame = 1 Query: 1 GYYHYSYSVVRGCDRIVPVDIYVPGCPPTAEALLYGILQLQKKMNRRRD 147 GYYHY+YSV+RGCDR++PVDIYVPGCPPTAEALLYG+LQLQKK+ R+R+ Sbjct: 144 GYYHYAYSVLRGCDRVIPVDIYVPGCPPTAEALLYGVLQLQKKIKRKRE 192
BLAST of CX288506 vs. ExPASy Swiss-Prot
Match: NUOB_MARMM (NADH-quinone oxidoreductase subunit B OS=Maricaulis maris (strain MCS10) GN=nuoB PE=3 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 4.367e-20 Identity = 43/46 (93.48%), Postives = 45/46 (97.83%), Query Frame = 1 Query: 1 GYYHYSYSVVRGCDRIVPVDIYVPGCPPTAEALLYGILQLQKKMNR 138 GYYHYSYSVVRGCDRIVPVDIYVPGCPPTAEAL+YGILQLQKK+ R Sbjct: 137 GYYHYSYSVVRGCDRIVPVDIYVPGCPPTAEALVYGILQLQKKIRR 182
BLAST of CX288506 vs. ExPASy Swiss-Prot
Match: NUOB_JANSC (NADH-quinone oxidoreductase subunit B OS=Jannaschia sp. (strain CCS1) GN=nuoB PE=3 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 4.367e-20 Identity = 43/46 (93.48%), Postives = 45/46 (97.83%), Query Frame = 1 Query: 1 GYYHYSYSVVRGCDRIVPVDIYVPGCPPTAEALLYGILQLQKKMNR 138 GYYHYSYSVVRGCDRIVPVDIYVPGCPPTAEALLYGILQLQ+K+ R Sbjct: 126 GYYHYSYSVVRGCDRIVPVDIYVPGCPPTAEALLYGILQLQRKIRR 171
BLAST of CX288506 vs. ExPASy Swiss-Prot
Match: NUOB1_RHOSK (NADH-quinone oxidoreductase subunit B 1 OS=Rhodobacter sphaeroides (strain KD131 / KCTC 12085) GN=nuoB1 PE=3 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 4.367e-20 Identity = 43/46 (93.48%), Postives = 45/46 (97.83%), Query Frame = 1 Query: 1 GYYHYSYSVVRGCDRIVPVDIYVPGCPPTAEALLYGILQLQKKMNR 138 GYYHYSYSVVRGCDRIVPVDIYVPGCPPTAEALLYGILQLQ+K+ R Sbjct: 123 GYYHYSYSVVRGCDRIVPVDIYVPGCPPTAEALLYGILQLQRKIRR 168 The following BLAST results are available for this feature:
BLAST of CX288506 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 242
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Sequences
The
following sequences are available for this feature:
EST sequence >CX288506 ID=CX288506; Name=CX288506; organism=Citrus clementina; type=EST; length=432bpback to top |