CX288506
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX288506 vs. ExPASy Swiss-Prot
Match: NUOB1_RHOS4 (NADH-quinone oxidoreductase subunit B 1 OS=Rhodobacter sphaeroides (strain ATCC 17023 / 2.4.1 / NCIB 8253 / DSM 158) GN=nuoB1 PE=3 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 4.367e-20 Identity = 43/46 (93.48%), Postives = 45/46 (97.83%), Query Frame = 1 Query: 1 GYYHYSYSVVRGCDRIVPVDIYVPGCPPTAEALLYGILQLQKKMNR 138 GYYHYSYSVVRGCDRIVPVDIYVPGCPPTAEALLYGILQLQ+K+ R Sbjct: 123 GYYHYSYSVVRGCDRIVPVDIYVPGCPPTAEALLYGILQLQRKIRR 168
BLAST of CX288506 vs. ExPASy Swiss-Prot
Match: NUOB1_RHOS1 (NADH-quinone oxidoreductase subunit B 1 OS=Rhodobacter sphaeroides (strain ATCC 17029 / ATH 2.4.9) GN=nuoB1 PE=3 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 4.367e-20 Identity = 43/46 (93.48%), Postives = 45/46 (97.83%), Query Frame = 1 Query: 1 GYYHYSYSVVRGCDRIVPVDIYVPGCPPTAEALLYGILQLQKKMNR 138 GYYHYSYSVVRGCDRIVPVDIYVPGCPPTAEALLYGILQLQ+K+ R Sbjct: 125 GYYHYSYSVVRGCDRIVPVDIYVPGCPPTAEALLYGILQLQRKIRR 170
BLAST of CX288506 vs. ExPASy Swiss-Prot
Match: NDUS7_DICDI (NADH dehydrogenase [ubiquinone] iron-sulfur protein 7, mitochondrial OS=Dictyostelium discoideum GN=ndufs7 PE=3 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 5.703e-20 Identity = 40/50 (80.00%), Postives = 47/50 (94.00%), Query Frame = 1 Query: 1 GYYHYSYSVVRGCDRIVPVDIYVPGCPPTAEALLYGILQLQKKMNRRRDL 150 GYYHYSYSVVRGCDRI+PVD+Y+PGCPPTAEA +YGILQLQKK+ R ++L Sbjct: 123 GYYHYSYSVVRGCDRIIPVDVYIPGCPPTAEAFVYGILQLQKKIGREQNL 172
BLAST of CX288506 vs. ExPASy Swiss-Prot
Match: NUOB_SPHWW (NADH-quinone oxidoreductase subunit B OS=Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273) GN=nuoB PE=3 SV=1) HSP 1 Score: 95.9005 bits (237), Expect = 7.448e-20 Identity = 42/46 (91.30%), Postives = 45/46 (97.83%), Query Frame = 1 Query: 1 GYYHYSYSVVRGCDRIVPVDIYVPGCPPTAEALLYGILQLQKKMNR 138 GYYHYSYSVVRGCDRIVPVDIYVPGCPPTAEALLYGI+QLQ+K+ R Sbjct: 136 GYYHYSYSVVRGCDRIVPVDIYVPGCPPTAEALLYGIMQLQRKIRR 181
BLAST of CX288506 vs. ExPASy Swiss-Prot
Match: NUOB_SILPO (NADH-quinone oxidoreductase subunit B OS=Silicibacter pomeroyi GN=nuoB PE=3 SV=2) HSP 1 Score: 95.9005 bits (237), Expect = 7.448e-20 Identity = 42/46 (91.30%), Postives = 45/46 (97.83%), Query Frame = 1 Query: 1 GYYHYSYSVVRGCDRIVPVDIYVPGCPPTAEALLYGILQLQKKMNR 138 GYYHYSYSVVRGCDRIVPVDIYVPGCPPTAEALLYG+LQLQ+K+ R Sbjct: 126 GYYHYSYSVVRGCDRIVPVDIYVPGCPPTAEALLYGLLQLQRKIRR 171
BLAST of CX288506 vs. ExPASy Swiss-Prot
Match: NUOB_XYLFT (NADH-quinone oxidoreductase subunit B OS=Xylella fastidiosa (strain Temecula1 / ATCC 700964) GN=nuoB PE=3 SV=2) HSP 1 Score: 95.5153 bits (236), Expect = 9.728e-20 Identity = 42/50 (84.00%), Postives = 47/50 (94.00%), Query Frame = 1 Query: 1 GYYHYSYSVVRGCDRIVPVDIYVPGCPPTAEALLYGILQLQKKMNRRRDL 150 GYYHYSYSVVRGCDRIVPVD+YVPGCPPTAEAL+YGILQLQKK+ R + + Sbjct: 133 GYYHYSYSVVRGCDRIVPVDVYVPGCPPTAEALVYGILQLQKKIWRTKTI 182
BLAST of CX288506 vs. ExPASy Swiss-Prot
Match: NUOB_XYLF2 (NADH-quinone oxidoreductase subunit B OS=Xylella fastidiosa (strain M23) GN=nuoB PE=3 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 9.728e-20 Identity = 42/50 (84.00%), Postives = 47/50 (94.00%), Query Frame = 1 Query: 1 GYYHYSYSVVRGCDRIVPVDIYVPGCPPTAEALLYGILQLQKKMNRRRDL 150 GYYHYSYSVVRGCDRIVPVD+YVPGCPPTAEAL+YGILQLQKK+ R + + Sbjct: 133 GYYHYSYSVVRGCDRIVPVDVYVPGCPPTAEALVYGILQLQKKIWRTKTI 182
BLAST of CX288506 vs. ExPASy Swiss-Prot
Match: NUOB_XANOR (NADH-quinone oxidoreductase subunit B OS=Xanthomonas oryzae pv. oryzae GN=nuoB PE=3 SV=2) HSP 1 Score: 95.5153 bits (236), Expect = 9.728e-20 Identity = 43/50 (86.00%), Postives = 47/50 (94.00%), Query Frame = 1 Query: 1 GYYHYSYSVVRGCDRIVPVDIYVPGCPPTAEALLYGILQLQKKMNRRRDL 150 GYYHYSYSVVRGCDRIVPVDIYVPGCPPTAEAL+YGILQLQKK+ R + + Sbjct: 133 GYYHYSYSVVRGCDRIVPVDIYVPGCPPTAEALVYGILQLQKKIWRTQTI 182
BLAST of CX288506 vs. ExPASy Swiss-Prot
Match: NUOB_XANOP (NADH-quinone oxidoreductase subunit B OS=Xanthomonas oryzae pv. oryzae (strain PXO99A) GN=nuoB PE=3 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 9.728e-20 Identity = 43/50 (86.00%), Postives = 47/50 (94.00%), Query Frame = 1 Query: 1 GYYHYSYSVVRGCDRIVPVDIYVPGCPPTAEALLYGILQLQKKMNRRRDL 150 GYYHYSYSVVRGCDRIVPVDIYVPGCPPTAEAL+YGILQLQKK+ R + + Sbjct: 131 GYYHYSYSVVRGCDRIVPVDIYVPGCPPTAEALVYGILQLQKKIWRTQTI 180
BLAST of CX288506 vs. ExPASy Swiss-Prot
Match: NUOB_XANOM (NADH-quinone oxidoreductase subunit B OS=Xanthomonas oryzae pv. oryzae (strain MAFF 311018) GN=nuoB PE=3 SV=2) HSP 1 Score: 95.5153 bits (236), Expect = 9.728e-20 Identity = 43/50 (86.00%), Postives = 47/50 (94.00%), Query Frame = 1 Query: 1 GYYHYSYSVVRGCDRIVPVDIYVPGCPPTAEALLYGILQLQKKMNRRRDL 150 GYYHYSYSVVRGCDRIVPVDIYVPGCPPTAEAL+YGILQLQKK+ R + + Sbjct: 133 GYYHYSYSVVRGCDRIVPVDIYVPGCPPTAEALVYGILQLQKKIWRTQTI 182 The following BLAST results are available for this feature:
BLAST of CX288506 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 242
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Sequences
The
following sequences are available for this feature:
EST sequence >CX288506 ID=CX288506; Name=CX288506; organism=Citrus clementina; type=EST; length=432bpback to top |