CX288527
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX288527 vs. ExPASy Swiss-Prot
Match: CH60_RHOCS (60 kDa chaperonin OS=Rhodospirillum centenum (strain ATCC 51521 / SW) GN=groL PE=3 SV=1) HSP 1 Score: 167.548 bits (423), Expect = 1.393e-45 Identity = 86/175 (49.14%), Postives = 121/175 (69.14%), Query Frame = 3 Query: 3 LRGALKIAALKAPGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVVLTKDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVG 527 LRG LK+AA+KAPGFG+R+ L+D+AILTGG V+ +++G+ L+ V E+LG A KVV+TKD TTIV +++ + R+ QI+ IE DY+REKL ER+AKL+GGVAVI+VG TE E+KE+K RV+DA++AT+AA LL + +D K T N+++K G Sbjct: 267 LRGGLKVAAVKAPGFGDRRKAMLEDMAILTGGQVVSEDLGIKLENVSLEMLGQAKKVVITKDNTTIVDGAGSKEDIQARIVQIKAQIEETTSDYDREKLQERLAKLAGGVAVIRVGGATEVEVKERKDRVDDAMHATRAAVEEGIVAGGGVALLYATKALD--KLTAVNEDQKFG 439 HSP 2 Score: 36.5798 bits (83), Expect = 1.393e-45 Identity = 17/38 (44.74%), Postives = 26/38 (68.42%), Query Frame = 1 Query: 532 DIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYG 645 DIV++AL P++ IA+NAG +GSV+ K+L +G Sbjct: 441 DIVRKALQAPVRQIAQNAGFDGSVIVGKLLEKGETNFG 478
BLAST of CX288527 vs. ExPASy Swiss-Prot
Match: CH601_RHOPS (60 kDa chaperonin 1 OS=Rhodopseudomonas palustris (strain BisB5) GN=groL1 PE=3 SV=1) HSP 1 Score: 164.081 bits (414), Expect = 1.393e-45 Identity = 86/175 (49.14%), Postives = 118/175 (67.43%), Query Frame = 3 Query: 3 LRGALKIAALKAPGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVVLTKDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVG 527 LRG LK+AA+KAPGFG+R+ L DIAILTGG I +++G+ ++ V ++LG A KV++ K+ TTIV + + RVAQI+ IE DY+REKL ER+AKL+GGVAVI+VG TE E+KE+K RV+DA++AT+AA LLR S ++ IK ND++K G Sbjct: 267 LRGGLKVAAVKAPGFGDRRKAMLQDIAILTGGQAISEDLGIKMENVTLQMLGKAKKVMIDKENTTIVNGAGKKADIEARVAQIKAQIEETTSDYDREKLQERLAKLAGGVAVIRVGGATEIEVKERKDRVDDAMHATRAAVEEGIVPGGGVALLRASEQLKRIK--TQNDDQKTG 439 HSP 2 Score: 40.0466 bits (92), Expect = 1.393e-45 Identity = 19/38 (50.00%), Postives = 26/38 (68.42%), Query Frame = 1 Query: 532 DIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYG 645 +IV++AL P + IA NAG +GSV+ KVL D + YG Sbjct: 441 EIVRKALSAPARQIAINAGEDGSVIVGKVLEKDQYNYG 478
BLAST of CX288527 vs. ExPASy Swiss-Prot
Match: CH60_SILST (60 kDa chaperonin OS=Silicibacter sp. (strain TM1040) GN=groL PE=3 SV=1) HSP 1 Score: 163.696 bits (413), Expect = 1.393e-45 Identity = 83/140 (59.29%), Postives = 105/140 (75.00%), Query Frame = 3 Query: 3 LRGALKIAALKAPGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVVLTKDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAA 422 LRG LKIAA+KAPGFG+R+ L DIAILTGG VI +++G+ L+ V ++LG A K+ +TKD TTIV + + RVAQIR IE DY+REKL ER+AKL+GGVAVI+VG TE E+KE+K RV+DALNAT+AA Sbjct: 267 LRGGLKIAAVKAPGFGDRRKAMLQDIAILTGGQVISEDLGMKLESVTMDMLGTAKKIQITKDETTIVDGAGEKAEIEARVAQIRAQIEETTSDYDREKLQERVAKLAGGVAVIRVGGMTEVEVKERKDRVDDALNATRAA 406 HSP 2 Score: 40.4318 bits (93), Expect = 1.393e-45 Identity = 19/37 (51.35%), Postives = 29/37 (78.38%), Query Frame = 1 Query: 535 IVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYG 645 IV+RAL PL+ IA+NAGV+G+VV+ K+ S++ +G Sbjct: 442 IVRRALEAPLRQIAENAGVDGAVVAGKIRESEDKNFG 478
BLAST of CX288527 vs. ExPASy Swiss-Prot
Match: CH601_RHOPB (60 kDa chaperonin 1 OS=Rhodopseudomonas palustris (strain BisB18) GN=groL1 PE=3 SV=1) HSP 1 Score: 162.925 bits (411), Expect = 1.393e-45 Identity = 86/175 (49.14%), Postives = 117/175 (66.86%), Query Frame = 3 Query: 3 LRGALKIAALKAPGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVVLTKDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVG 527 LRG LK+AA+KAPGFG+R+ L DIAILTGG I +++G+ ++ V +LG A KV++ K+ TTIV + + RVAQI+ IE DY+REKL ER+AKL+GGVAVI+VG TE E+KE+K RV+DA++AT+AA LLR S ++ IK ND++K G Sbjct: 267 LRGGLKVAAVKAPGFGDRRKAMLQDIAILTGGQAISEDLGIKMENVTLAMLGKAKKVMIDKENTTIVNGAGKKADIEARVAQIKAQIEETTSDYDREKLQERLAKLAGGVAVIRVGGATEIEVKERKDRVDDAMHATRAAVEEGILPGGGVALLRASEQLKRIK--TQNDDQKTG 439 HSP 2 Score: 41.2022 bits (95), Expect = 1.393e-45 Identity = 18/38 (47.37%), Postives = 27/38 (71.05%), Query Frame = 1 Query: 532 DIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYG 645 +IV++AL +P + IA NAG +GSV+ K+L D + YG Sbjct: 441 EIVRKALSWPARQIAINAGEDGSVIVGKILEKDQYSYG 478
BLAST of CX288527 vs. ExPASy Swiss-Prot
Match: CH60_THET8 (60 kDa chaperonin OS=Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579) GN=groL PE=1 SV=3) HSP 1 Score: 166.777 bits (421), Expect = 1.393e-45 Identity = 88/171 (51.46%), Postives = 116/171 (67.84%), Query Frame = 3 Query: 3 LRGALKIAALKAPGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVVLTKDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDE 515 LRG L +AA+KAPGFG+R+ + L DIA +TGGTVI +E+G L+ +LG A +V +TKD TTIVG ++ + R+ I+ +E + +Y REKL ER+AKL+GGVAVI+VGA TETELKEKK R EDALNAT+AA TLLR S V+ + + L+ DE Sbjct: 265 LRGTLSVAAVKAPGFGDRRKEMLKDIAAVTGGTVISEELGFKLENATLSMLGRAERVRITKDETTIVGGKGKKEDIEARINGIKKELETTDSEYAREKLQERLAKLAGGVAVIRVGAATETELKEKKHRFEDALNATRAAVEEGIVPGGGVTLLRAISAVEELIKKLEGDE 435 HSP 2 Score: 37.3502 bits (85), Expect = 1.393e-45 Identity = 22/50 (44.00%), Postives = 33/50 (66.00%), Query Frame = 1 Query: 517 KRLEAD------IVKRALCYPLKLIAKNAGVNGSVVSEKVLS-SDNHKYG 645 K+LE D IV+RAL P + IA+NAG GSV+ +++L+ + N +YG Sbjct: 429 KKLEGDEATGAKIVRRALEEPARQIAENAGYEGSVIVQQILAETKNPRYG 478
BLAST of CX288527 vs. ExPASy Swiss-Prot
Match: CH60_THET2 (60 kDa chaperonin OS=Thermus thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039) GN=groL PE=1 SV=2) HSP 1 Score: 166.777 bits (421), Expect = 1.393e-45 Identity = 88/171 (51.46%), Postives = 116/171 (67.84%), Query Frame = 3 Query: 3 LRGALKIAALKAPGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVVLTKDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDE 515 LRG L +AA+KAPGFG+R+ + L DIA +TGGTVI +E+G L+ +LG A +V +TKD TTIVG ++ + R+ I+ +E + +Y REKL ER+AKL+GGVAVI+VGA TETELKEKK R EDALNAT+AA TLLR S V+ + + L+ DE Sbjct: 265 LRGTLSVAAVKAPGFGDRRKEMLKDIAAVTGGTVISEELGFKLENATLSMLGRAERVRITKDETTIVGGKGKKEDIEARINGIKKELETTDSEYAREKLQERLAKLAGGVAVIRVGAATETELKEKKHRFEDALNATRAAVEEGIVPGGGVTLLRAISAVEELIKKLEGDE 435 HSP 2 Score: 37.3502 bits (85), Expect = 1.393e-45 Identity = 22/50 (44.00%), Postives = 33/50 (66.00%), Query Frame = 1 Query: 517 KRLEAD------IVKRALCYPLKLIAKNAGVNGSVVSEKVLS-SDNHKYG 645 K+LE D IV+RAL P + IA+NAG GSV+ +++L+ + N +YG Sbjct: 429 KKLEGDEATGAKIVRRALEEPARQIAENAGYEGSVIVQQILAETKNPRYG 478
BLAST of CX288527 vs. ExPASy Swiss-Prot
Match: CH60_CAMHC (60 kDa chaperonin OS=Campylobacter hominis (strain ATCC BAA-381 / LMG 19568 / NCTC 13146 / CH001A) GN=groL PE=3 SV=1) HSP 1 Score: 165.236 bits (417), Expect = 1.393e-45 Identity = 91/175 (52.00%), Postives = 117/175 (66.86%), Query Frame = 3 Query: 3 LRGALKIAALKAPGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVVLTKDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVG 527 LRG L I+A+KAPGFG+R+ L+DIAILTGGTVI +E+G L+ LG A ++++ KD TTIV +D + RV QI+ I DY+REKL ER+AKLSGGVAVI+VGA TETE+KEKK RV+DAL+ATKAA L++ +A+KE L D EK+G Sbjct: 266 LRGVLNISAVKAPGFGDRRKAMLEDIAILTGGTVISEELGRTLESASIADLGKAERILIDKDNTTIVNGAGKKDDIKARVDQIKAQIAVTSSDYDREKLQERLAKLSGGVAVIKVGAATETEMKEKKDRVDDALSATKAAVEEGIVIGGGAALIKAG---NAVKENLKGD-EKIG 436 HSP 2 Score: 38.891 bits (89), Expect = 1.393e-45 Identity = 19/43 (44.19%), Postives = 28/43 (65.12%), Query Frame = 1 Query: 517 KRLEADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYG 645 +++ ADIVKRAL PL+ IA+NAG + V++ V + YG Sbjct: 433 EKIGADIVKRALFAPLRQIAENAGFDAGVIANAVSINKEKAYG 475
BLAST of CX288527 vs. ExPASy Swiss-Prot
Match: CH60_PORPU (60 kDa chaperonin, chloroplastic OS=Porphyra purpurea GN=groL PE=3 SV=1) HSP 1 Score: 162.54 bits (410), Expect = 1.394e-45 Identity = 88/172 (51.16%), Postives = 119/172 (69.19%), Query Frame = 3 Query: 3 LRGALKIAALKAPGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVVLTKDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDA-IKETLDNDE 515 LRG L + A++APGFG+R+ L+D++ILTGG VI ++ G +LD V ++LG A +VV+TKD+TTI+ DG + V R QI+ IE ++ YEREKL ER+AKLSGGVAVI+VGA TETE+K+KKLR+EDA+NATKAA T + +S ++ K L DE Sbjct: 267 LRGILNVVAVRAPGFGDRRKSLLEDMSILTGGQVITEDAGFSLDTVQLDMLGKARRVVVTKDSTTIIADGH-EATVKSRCEQIKRQIETSDSLYEREKLQERLAKLSGGVAVIKVGAATETEMKDKKLRLEDAINATKAAIEEGIVPGGGSTNVHISGELFVWAKNNLFEDE 437 HSP 2 Score: 41.5874 bits (96), Expect = 1.394e-45 Identity = 21/32 (65.62%), Postives = 26/32 (81.25%), Query Frame = 1 Query: 535 IVKRALCYPLKLIAKNAGVNGSVVSEKVLSSD 630 IV+RAL YPL+ IA NAG NG+VV EKV ++D Sbjct: 443 IVQRALTYPLRRIAFNAGDNGAVVVEKVKTND 474
BLAST of CX288527 vs. ExPASy Swiss-Prot
Match: CH601_RHOP2 (60 kDa chaperonin 1 OS=Rhodopseudomonas palustris (strain HaA2) GN=groL1 PE=3 SV=1) HSP 1 Score: 167.162 bits (422), Expect = 1.816e-45 Identity = 90/175 (51.43%), Postives = 116/175 (66.29%), Query Frame = 3 Query: 3 LRGALKIAALKAPGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVVLTKDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVG 527 LRG LK++A+KAPGFG+R+ L+DIAILTGG +I +E+G+ L+ V ++LG A KVV+ K+ TTIVG + + RV QI+ IE DY+REKL ER+AKL+GGVAVI+VG TE E+KEKK RVEDALNAT+AA LLR V I DN + + G Sbjct: 267 LRGGLKVSAVKAPGFGDRRKAMLEDIAILTGGQLISEEIGIKLESVTLKMLGRAKKVVIDKENTTIVGGAGKKPDIEARVQQIKAQIEETSSDYDREKLQERLAKLAGGVAVIRVGGATEVEVKEKKDRVEDALNATRAAVQEGIVPGGGVALLRAKKAVGRIHN--DNADVQAG 439 HSP 2 Score: 36.5798 bits (83), Expect = 1.816e-45 Identity = 17/38 (44.74%), Postives = 27/38 (71.05%), Query Frame = 1 Query: 532 DIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYG 645 +IV +AL P++ IA+NAGV GS+V K+L + + +G Sbjct: 441 NIVLKALEAPIRQIAENAGVEGSIVVGKILENKSETFG 478
BLAST of CX288527 vs. ExPASy Swiss-Prot
Match: CH60_PSEMY (60 kDa chaperonin OS=Pseudomonas mendocina (strain ymp) GN=groL PE=3 SV=1) HSP 1 Score: 177.948 bits (450), Expect = 1.816e-45 Identity = 93/175 (53.14%), Postives = 121/175 (69.14%), Query Frame = 3 Query: 3 LRGALKIAALKAPGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVVLTKDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVG 527 +RG +K+AA+KAPGFG+R+ L DIAILTGGTVI +EVGL+L+ E LGNA +VVL KD TTI+ Q + RVAQIR +E DY++EKL ER+AKL+GGVAVI+VGA TE E+KEKK RVEDAL+AT+AA L+R ++ +K DN+++ VG Sbjct: 267 MRGIVKVAAVKAPGFGDRRKAMLQDIAILTGGTVISEEVGLSLESATLEHLGNAKRVVLNKDNTTIIDGAGAQADIEARVAQIRKQVEETSSDYDKEKLQERLAKLAGGVAVIKVGAATEVEMKEKKARVEDALHATRAAVEEGVVPGGGVALVRALQAIEGLKG--DNEDQNVG 439 HSP 2 Score: 25.7942 bits (55), Expect = 1.816e-45 Identity = 13/28 (46.43%), Postives = 19/28 (67.86%), Query Frame = 1 Query: 535 IVKRALCYPLKLIAKNAGVNGSVVSEKV 618 +++RA+ PL+ I NAG SVV +KV Sbjct: 442 LLRRAVEAPLRQIVANAGGEPSVVVDKV 469 The following BLAST results are available for this feature:
BLAST of CX288527 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CX288527 ID=CX288527; Name=CX288527; organism=Citrus clementina; type=EST; length=646bpback to top |