CX288585

Overview
NameCX288585
Unique NameCX288585
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length327
Libraries
Library NameType
IF1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CX288585 vs. ExPASy Swiss-Prot
Match: PAL1_POPKI (Phenylalanine ammonia-lyase G1 OS=Populus kitakamiensis GN=PALG1 PE=3 SV=1)

HSP 1 Score: 201.83 bits (512), Expect = 8.837e-52
Identity = 96/108 (88.89%), Postives = 106/108 (98.15%), Query Frame = 2 
Query:    2 FSELVNDFYSNGLPSNLSGGRNPCLDYGFKGAEIAMAAYCSELQFLANPVTNHVQSAEQHNQDVNSLGLISARKTAEAVDILKLMSSTYLIALCQAIDLRHLEENLKS 325
            FSELVNDFY+NGLPSNL+GGRNP LDYGFKGAEIAMA+YCSELQFLANPVTNHVQSAEQHNQDVNSLGLIS+RKTAEAVDILKLMS+T+L+ LCQA+DLRH+EENLK+
Sbjct:  393 FSELVNDFYNNGLPSNLTGGRNPSLDYGFKGAEIAMASYCSELQFLANPVTNHVQSAEQHNQDVNSLGLISSRKTAEAVDILKLMSTTFLVGLCQAVDLRHIEENLKN 500
[Close]
BLAST of CX288585 vs. ExPASy Swiss-Prot
Match: PAL1_DAUCA (Phenylalanine ammonia-lyase 1 OS=Daucus carota GN=PAL1 PE=3 SV=1)

HSP 1 Score: 201.83 bits (512), Expect = 8.837e-52
Identity = 97/108 (89.81%), Postives = 105/108 (97.22%), Query Frame = 2 
Query:    2 FSELVNDFYSNGLPSNLSGGRNPCLDYGFKGAEIAMAAYCSELQFLANPVTNHVQSAEQHNQDVNSLGLISARKTAEAVDILKLMSSTYLIALCQAIDLRHLEENLKS 325
            FSELVNDFY+NGLPSNLSGGRNP LDYGFKGAEIAMA+YCSELQFL NPVTNHVQSAEQHNQDVNSLGLIS+RKTAEAV+ILKLMS+T+L+ LCQA+DLRHLEENLKS
Sbjct:  419 FSELVNDFYNNGLPSNLSGGRNPSLDYGFKGAEIAMASYCSELQFLGNPVTNHVQSAEQHNQDVNSLGLISSRKTAEAVEILKLMSTTFLVGLCQAVDLRHLEENLKS 526
[Close]
BLAST of CX288585 vs. ExPASy Swiss-Prot
Match: PAL2_CICAR (Phenylalanine ammonia-lyase 2 OS=Cicer arietinum GN=PAL2 PE=2 SV=1)

HSP 1 Score: 201.06 bits (510), Expect = 1.507e-51
Identity = 97/108 (89.81%), Postives = 106/108 (98.15%), Query Frame = 2 
Query:    2 FSELVNDFYSNGLPSNLSGGRNPCLDYGFKGAEIAMAAYCSELQFLANPVTNHVQSAEQHNQDVNSLGLISARKTAEAVDILKLMSSTYLIALCQAIDLRHLEENLKS 325
            FSELVNDFY+NGLPSNL+G RNP LDYGFKGAEIAMA+YCSELQ+LANPVTNHVQSAEQHNQDVNSLGLIS+RKTAEAV+ILKLMSST+L+ALCQAIDLRH+EENLKS
Sbjct:  429 FSELVNDFYNNGLPSNLTGSRNPSLDYGFKGAEIAMASYCSELQYLANPVTNHVQSAEQHNQDVNSLGLISSRKTAEAVEILKLMSSTFLVALCQAIDLRHIEENLKS 536
[Close]
BLAST of CX288585 vs. ExPASy Swiss-Prot
Match: PAL5_SOLLC (Phenylalanine ammonia-lyase OS=Solanum lycopersicum GN=PAL5 PE=3 SV=1)

HSP 1 Score: 200.29 bits (508), Expect = 2.571e-51
Identity = 98/108 (90.74%), Postives = 104/108 (96.30%), Query Frame = 2 
Query:    2 FSELVNDFYSNGLPSNLSGGRNPCLDYGFKGAEIAMAAYCSELQFLANPVTNHVQSAEQHNQDVNSLGLISARKTAEAVDILKLMSSTYLIALCQAIDLRHLEENLKS 325
            FSELVND+Y+NGLP NL+ GRNP LDYG KGAEIAMA+YCSELQFLANPVTNHVQSAEQHNQDVNSLGLISARKTAEAVDILKLMSSTYL+ALCQAIDLRHLEENLK+
Sbjct:  432 FSELVNDYYNNGLPLNLTAGRNPSLDYGLKGAEIAMASYCSELQFLANPVTNHVQSAEQHNQDVNSLGLISARKTAEAVDILKLMSSTYLVALCQAIDLRHLEENLKN 539
[Close]
BLAST of CX288585 vs. ExPASy Swiss-Prot
Match: PAL2_TOBAC (Phenylalanine ammonia-lyase OS=Nicotiana tabacum GN=PALA PE=2 SV=2)

HSP 1 Score: 199.904 bits (507), Expect = 3.358e-51
Identity = 97/108 (89.81%), Postives = 105/108 (97.22%), Query Frame = 2 
Query:    2 FSELVNDFYSNGLPSNLSGGRNPCLDYGFKGAEIAMAAYCSELQFLANPVTNHVQSAEQHNQDVNSLGLISARKTAEAVDILKLMSSTYLIALCQAIDLRHLEENLKS 325
            FSELVND+Y+NGLPSNL+ GRNP LDYGFKG+EIAMA+YCSELQFLANPVTNHVQSAEQHNQDVNSL LISARKTAEAVDILKLMSSTYL+ALCQAIDLRHLEENL++
Sbjct:  423 FSELVNDYYNNGLPSNLTAGRNPSLDYGFKGSEIAMASYCSELQFLANPVTNHVQSAEQHNQDVNSLDLISARKTAEAVDILKLMSSTYLVALCQAIDLRHLEENLRN 530
[Close]
BLAST of CX288585 vs. ExPASy Swiss-Prot
Match: PAL1_IPOBA (Phenylalanine ammonia-lyase OS=Ipomoea batatas GN=PAL PE=2 SV=1)

HSP 1 Score: 199.904 bits (507), Expect = 3.358e-51
Identity = 97/108 (89.81%), Postives = 105/108 (97.22%), Query Frame = 2 
Query:    2 FSELVNDFYSNGLPSNLSGGRNPCLDYGFKGAEIAMAAYCSELQFLANPVTNHVQSAEQHNQDVNSLGLISARKTAEAVDILKLMSSTYLIALCQAIDLRHLEENLKS 325
            FSELVND+Y+NGLPSNL+ GRNP LDYGFKGAEIAMA+YCSELQFLANPVTNHVQSAEQHNQDVNSLGLISARKTAEAVD+LKLMSSTYL+ALCQAIDLR LEENL++
Sbjct:  418 FSELVNDYYNNGLPSNLTAGRNPSLDYGFKGAEIAMASYCSELQFLANPVTNHVQSAEQHNQDVNSLGLISARKTAEAVDVLKLMSSTYLVALCQAIDLRFLEENLRN 525
[Close]
BLAST of CX288585 vs. ExPASy Swiss-Prot
Match: PAL4_POPKI (Phenylalanine ammonia-lyase G4 (Fragment) OS=Populus kitakamiensis GN=PALG4 PE=3 SV=1)

HSP 1 Score: 198.749 bits (504), Expect = 7.481e-51
Identity = 95/108 (87.96%), Postives = 106/108 (98.15%), Query Frame = 2 
Query:    2 FSELVNDFYSNGLPSNLSGGRNPCLDYGFKGAEIAMAAYCSELQFLANPVTNHVQSAEQHNQDVNSLGLISARKTAEAVDILKLMSSTYLIALCQAIDLRHLEENLKS 325
            FSELVND+Y+NGLPSNL+GGRNP LDYGFKGAEIAMA+YCSELQFLANPVTNHVQSAEQHNQDVNSLGLISARKTAEAV+IL +MS+T+L+ALCQAIDLRH+EENLK+
Sbjct:  282 FSELVNDYYNNGLPSNLTGGRNPSLDYGFKGAEIAMASYCSELQFLANPVTNHVQSAEQHNQDVNSLGLISARKTAEAVEILNVMSTTWLVALCQAIDLRHIEENLKN 389
[Close]
BLAST of CX288585 vs. ExPASy Swiss-Prot
Match: PALY_BROFI (Phenylalanine ammonia-lyase OS=Bromheadia finlaysoniana GN=PAL PE=2 SV=1)

HSP 1 Score: 198.364 bits (503), Expect = 9.771e-51
Identity = 96/108 (88.89%), Postives = 104/108 (96.30%), Query Frame = 2 
Query:    2 FSELVNDFYSNGLPSNLSGGRNPCLDYGFKGAEIAMAAYCSELQFLANPVTNHVQSAEQHNQDVNSLGLISARKTAEAVDILKLMSSTYLIALCQAIDLRHLEENLKS 325
            FSELVNDFY+NGLPSNLS GRNP LDYGFKGAEIAMA+YCSELQ LANPVTNHVQSAEQHNQDVNSLGLIS+RKTAEAVDILKLMS+T+L+ LCQA+DLRHLEENLK+
Sbjct:  415 FSELVNDFYNNGLPSNLSSGRNPSLDYGFKGAEIAMASYCSELQALANPVTNHVQSAEQHNQDVNSLGLISSRKTAEAVDILKLMSTTFLVGLCQAVDLRHLEENLKN 522
[Close]
BLAST of CX288585 vs. ExPASy Swiss-Prot
Match: PALY_POPTR (Phenylalanine ammonia-lyase OS=Populus trichocarpa GN=PAL PE=2 SV=1)

HSP 1 Score: 197.593 bits (501), Expect = 1.667e-50
Identity = 96/108 (88.89%), Postives = 104/108 (96.30%), Query Frame = 2 
Query:    2 FSELVNDFYSNGLPSNLSGGRNPCLDYGFKGAEIAMAAYCSELQFLANPVTNHVQSAEQHNQDVNSLGLISARKTAEAVDILKLMSSTYLIALCQAIDLRHLEENLKS 325
            FSELVNDFY+NGLPSNL+  RNP LDYGFKGAEIAMA+YCSELQ+LANPVT HVQSAEQHNQDVNSLGLIS+RKTAEAVDILKLMS+T+L+ALCQAIDLRHLEENLKS
Sbjct:  426 FSELVNDFYNNGLPSNLTASRNPSLDYGFKGAEIAMASYCSELQYLANPVTTHVQSAEQHNQDVNSLGLISSRKTAEAVDILKLMSTTFLVALCQAIDLRHLEENLKS 533
[Close]
BLAST of CX288585 vs. ExPASy Swiss-Prot
Match: PALY_STYHU (Phenylalanine ammonia-lyase OS=Stylosanthes humilis GN=PAL17.1 PE=2 SV=1)

HSP 1 Score: 194.897 bits (494), Expect = 1.080e-49
Identity = 96/108 (88.89%), Postives = 102/108 (94.44%), Query Frame = 2 
Query:    2 FSELVNDFYSNGLPSNLSGGRNPCLDYGFKGAEIAMAAYCSELQFLANPVTNHVQSAEQHNQDVNSLGLISARKTAEAVDILKLMSSTYLIALCQAIDLRHLEENLKS 325
            FSELVNDFY+NGLPSNLS  RNP LDYGFKG EIAMA+YCSELQ+LANPVT+HVQSAEQHNQDVNSLGLISARKT EAV+ILKLMS TYLIALCQAIDLRHLEENLK+
Sbjct:  426 FSELVNDFYNNGLPSNLSASRNPSLDYGFKGTEIAMASYCSELQYLANPVTSHVQSAEQHNQDVNSLGLISARKTNEAVEILKLMSPTYLIALCQAIDLRHLEENLKN 533
The following BLAST results are available for this feature:
BLAST of CX288585 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 53
Match NameE-valueIdentityDescription
PAL1_POPKI8.837e-5288.89Phenylalanine ammonia-lyase G1 OS=Populus kitakami... [more]
PAL1_DAUCA8.837e-5289.81Phenylalanine ammonia-lyase 1 OS=Daucus carota GN=... [more]
PAL2_CICAR1.507e-5189.81Phenylalanine ammonia-lyase 2 OS=Cicer arietinum G... [more]
PAL5_SOLLC2.571e-5190.74Phenylalanine ammonia-lyase OS=Solanum lycopersicu... [more]
PAL2_TOBAC3.358e-5189.81Phenylalanine ammonia-lyase OS=Nicotiana tabacum G... [more]
PAL1_IPOBA3.358e-5189.81Phenylalanine ammonia-lyase OS=Ipomoea batatas GN=... [more]
PAL4_POPKI7.481e-5187.96Phenylalanine ammonia-lyase G4 (Fragment) OS=Popul... [more]
PALY_BROFI9.771e-5188.89Phenylalanine ammonia-lyase OS=Bromheadia finlayso... [more]
PALY_POPTR1.667e-5088.89Phenylalanine ammonia-lyase OS=Populus trichocarpa... [more]
PALY_STYHU1.080e-4988.89Phenylalanine ammonia-lyase OS=Stylosanthes humili... [more]

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Properties
Property NameValue
Genbank descriptionC02002A11SK IF1 Citrus clementina cDNA clone C02002A11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX288585 ID=CX288585; Name=CX288585; organism=Citrus clementina; type=EST; length=327bp
ATTTTCTGAGCTGGTTAATGATTTTTACAGTAATGGGTTGCCTTCAAATC
TGTCTGGTGGTAGGAATCCATGCTTGGATTATGGGTTCAAAGGTGCCGAA
ATAGCAATGGCTGCGTATTGTTCCGAGCTCCAGTTTCTAGCCAATCCTGT
GACTAATCACGTCCAAAGTGCTGAGCAACACAACCAAGATGTGAACTCTT
TAGGGCTGATCTCTGCCAGAAAAACAGCTGAAGCTGTTGATATCTTGAAG
CTCATGTCCTCAACTTACTTGATTGCACTCTGCCAAGCTATAGACTTGAG
GCACTTGGAGGAGAATCTGAAGAGCAC
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