CX288634
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX288634 vs. ExPASy Swiss-Prot
Match: SYP_PYRKO (Prolyl-tRNA synthetase OS=Pyrococcus kodakaraensis GN=proS PE=3 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 5.018e-19 Identity = 45/132 (34.09%), Postives = 67/132 (50.76%), Query Frame = 2 Query: 155 AGIRANSDFIDNYSPGWKYSHWEMKGVPLMIEIGPKDLANDQVRAVRRDNGAKIDLPMGSXXXXXXXXXXXXXXSLFVAAKQRRDACIQIVKTWDEFVEALGQRKMIL-APWCDEEE----VEKDVKARTKG 535 AGIR + D D PG KY WE+KGVPL IE+GP+D+ + RRD KI + + +L+ AK+ ++ I+ V T +E R+ I+ PWC EEE +E+++ A+ G Sbjct: 318 AGIRVHVDERD-IRPGRKYYDWELKGVPLRIEVGPRDVEGKKAVLARRDTLEKITVERDNIVEEVRKTLDAIHENLYQRAKEFLESHIKRVDTIEEAKAVFEDRRGIVEIPWCGEEECGLRMEEELDAKMLG 448 HSP 2 Score: 46.9802 bits (110), Expect = 5.018e-19 Identity = 15/33 (45.45%), Postives = 28/33 (84.85%), Query Frame = 1 Query: 4 MVMVHGDDKGLMLPPKVASVQVIDIPVPYKDAD 102 ++ +HGDD+G++LPP +A +QV+ +P+P KD++ Sbjct: 269 VIAIHGDDRGMVLPPTIAPIQVVIVPIPKKDSE 301
BLAST of CX288634 vs. ExPASy Swiss-Prot
Match: SYP_CHLSY (Prolyl-tRNA synthetase OS=Chloroflexus aurantiacus (strain ATCC 29364 / DSM 637 / Y-400-fl) GN=proS PE=3 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 5.018e-19 Identity = 45/145 (31.03%), Postives = 71/145 (48.97%), Query Frame = 2 Query: 107 KEFLMHALQLLKN*CEAGIRANSDFIDNYSPGWKYSHWEMKGVPLMIEIGPKDLANDQVRAVRRD---NGAKIDLPMGSXXXXXXXXXXXXXXSLFVAAKQRRDACIQIVKTWDEFVEALGQRKMILAPWCDEEEVEKDVKARTK 532 + +M A++ + + +R D DNYSPG+K++ WE+KGVP+ IE+GPKD+A + V RRD K +P +LF A R+A V ++DE E + +R A W + EK ++ T+ Sbjct: 303 RSLVMAAVEQMTAAWKGRLRFKVDDRDNYSPGYKFNEWELKGVPVRIEVGPKDVAKETVALARRDIPGKAGKSFVPQAGLTERIEALLNEMQTALFQRALAFREAHTADVTSYDELKEQI-ERGFARAYWAGDTADEKRIQEETR 446 HSP 2 Score: 40.817 bits (94), Expect = 5.018e-19 Identity = 15/37 (40.54%), Postives = 29/37 (78.38%), Query Frame = 1 Query: 4 MVMVHGDDKGLMLPPKVASVQVIDIPVPYKDADTQGI 114 ++M H DD+GL+LPP++A +QV+ +P+ YK+ + + + Sbjct: 270 LIMTHSDDEGLVLPPRLAPIQVVVVPI-YKNDEERSL 305
BLAST of CX288634 vs. ExPASy Swiss-Prot
Match: SYP_CHLAA (Prolyl-tRNA synthetase OS=Chloroflexus aurantiacus (strain ATCC 29366 / DSM 635 / J-10-fl) GN=proS PE=3 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 5.018e-19 Identity = 45/145 (31.03%), Postives = 71/145 (48.97%), Query Frame = 2 Query: 107 KEFLMHALQLLKN*CEAGIRANSDFIDNYSPGWKYSHWEMKGVPLMIEIGPKDLANDQVRAVRRD---NGAKIDLPMGSXXXXXXXXXXXXXXSLFVAAKQRRDACIQIVKTWDEFVEALGQRKMILAPWCDEEEVEKDVKARTK 532 + +M A++ + + +R D DNYSPG+K++ WE+KGVP+ IE+GPKD+A + V RRD K +P +LF A R+A V ++DE E + +R A W + EK ++ T+ Sbjct: 303 RSLVMAAVEQMTAAWKGRLRFKVDDRDNYSPGYKFNEWELKGVPVRIEVGPKDVAKETVALARRDIPGKAGKSFVPQAGLTERIEALLNEMQTALFQRALAFREAHTADVTSYDELKEQI-ERGFARAYWAGDTADEKRIQEETR 446 HSP 2 Score: 40.817 bits (94), Expect = 5.018e-19 Identity = 15/37 (40.54%), Postives = 29/37 (78.38%), Query Frame = 1 Query: 4 MVMVHGDDKGLMLPPKVASVQVIDIPVPYKDADTQGI 114 ++M H DD+GL+LPP++A +QV+ +P+ YK+ + + + Sbjct: 270 LIMTHSDDEGLVLPPRLAPIQVVVVPI-YKNDEERSL 305
BLAST of CX288634 vs. ExPASy Swiss-Prot
Match: SYP2_BACCR (Prolyl-tRNA synthetase 2 OS=Bacillus cereus (strain ATCC 14579 / DSM 31) GN=proS2 PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 5.019e-19 Identity = 38/112 (33.93%), Postives = 59/112 (52.68%), Query Frame = 2 Query: 188 NYSPGWKYSHWEMKGVPLMIEIGPKDLANDQVRAVRRDNGAKIDLPMGSXXXXXXXXXXXXXXSLFVAAKQRRDACIQIVKTWDEFVEALGQRK-MILAPWCDEEEVEKDVK 520 N +PGWK++ +EMKG+P+ +E+GPKD+ +QV VRRD K +PM +LF AK RD + ++E + +++ I A WC E E+ +K Sbjct: 327 NKTPGWKFNEYEMKGIPIRLEVGPKDIEKNQVVLVRRDTKEKEFVPMDQLEERIPALLEEIHIALFNKAKAFRDENTYVATNFEEMKKIADEKQGFIKAMWCGELACEEKLK 438 HSP 2 Score: 41.5874 bits (96), Expect = 5.019e-19 Identity = 16/27 (59.26%), Postives = 23/27 (85.19%), Query Frame = 1 Query: 4 MVMVHGDDKGLMLPPKVASVQVIDIPV 84 ++MVH D+ GL+LPPKVA VQV+ +P+ Sbjct: 271 LIMVHSDNNGLVLPPKVAPVQVVIVPI 297
BLAST of CX288634 vs. ExPASy Swiss-Prot
Match: SYP_GRAFK (Prolyl-tRNA synthetase OS=Gramella forsetii (strain KT0803) GN=proS PE=3 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 6.523e-19 Identity = 47/137 (34.31%), Postives = 65/137 (47.45%), Query Frame = 2 Query: 125 ALQLLKN*CEAGIRANSDFIDNYSPGWKYSHWEMKGVPLMIEIGPKDLANDQVRAVRRDNGAKIDLPMGSXXXXXXXXXXXXXXSLFVAAKQRRDACIQIVKTWDEFVEALGQR-KMILAPWCDEEEVEKDVKARTK 532 A +L+K G+ D DN PGWK++ +E++GVPL + IGPKDL V RRD K + SLF AKQ R+ I V ++D+F + L ++ I A W E E +K TK Sbjct: 322 ANELVKELRAVGVSVKFDNNDNQKPGWKFAQYELQGVPLRLAIGPKDLEKGTVELARRDTLTKEFVNRSEVVEKIKALMTEIQDSLFDKAKQYRNEHITEVDSFDDFKKVLKEKGGFISAHWDGTPETENKIKDLTK 458 HSP 2 Score: 40.4318 bits (93), Expect = 6.523e-19 Identity = 16/48 (33.33%), Postives = 28/48 (58.33%), Query Frame = 1 Query: 4 MVMVHGDDKGLMLPPKVASVQVIDIPVPYKDADTQGIFDACTATVEKL 147 ++M H DD GL+LPP +A +QV+ +P+ + I + V++L Sbjct: 282 LIMTHSDDNGLVLPPNLAPIQVVIVPIYRSEEQLDQISEVANELVKEL 329
BLAST of CX288634 vs. ExPASy Swiss-Prot
Match: SYP_ALKOO (Prolyl-tRNA synthetase OS=Alkaliphilus oremlandii (strain OhILAs) GN=proS PE=3 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 6.686e-19 Identity = 53/142 (37.32%), Postives = 72/142 (50.70%), Query Frame = 2 Query: 107 KEFLMHALQLLKN*CEAGIRANSDFIDNYSPGWKYSHWEMKGVPLMIEIGPKDLANDQVRAVRRDNGAKIDLPMGSXXXXXXXXXXXXXXSLFVAAKQRRDACIQIVKTWDEFVEALGQRK-MILAPWCDEEEVEKDVKART 529 KE ++ L++ + R D DNYSPGWK++ WEMKGVP+ IEIGP+D+ N+Q RRD K + + +L AK RD IVKT+DE E + + + A WC E E+ VKA T Sbjct: 304 KEGVLDKANELRDRLKDKFRVELDDRDNYSPGWKFNEWEMKGVPIRIEIGPRDIENNQAMLFRRDELEKDAVSLDDLEEAVEKLLEDINNNLLYKAKMMRDEKTYIVKTFDEMKEVMEIKPGFVKAMWCGERACEEHVKAET 445
BLAST of CX288634 vs. ExPASy Swiss-Prot
Match: SYP_EUBE2 (Prolyl-tRNA synthetase OS=Eubacterium eligens (strain ATCC 27750 / VPI C15-48) GN=proS PE=3 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 8.486e-19 Identity = 39/126 (30.95%), Postives = 61/126 (48.41%), Query Frame = 2 Query: 155 AGIRANSDFIDNYSPGWKYSHWEMKGVPLMIEIGPKDLANDQVRAVRRDNGAKIDLPMGSXXXXXXXXXXXXXXSLFVAAKQRRDACIQIVKTWDEFVE-ALGQRKMILAPWCDEEEVEKDVKART 529 AG+R D D +PGWK+S EM+G+P+ +E+GP+D+ +Q VRRD KI + + + A+ R+A +DEF + A + I A WC ++ E +K T Sbjct: 320 AGLRVKVDDSDK-NPGWKFSEQEMRGIPVRVEMGPRDIEANQAVIVRRDTREKITVSIDELADRIPEILDTIQKDMLERARAHREAHTYTALNYDEFKDTAANKAGFIKAMWCGDQACEDKIKEDT 444 HSP 2 Score: 44.2838 bits (103), Expect = 8.486e-19 Identity = 22/39 (56.41%), Postives = 27/39 (69.23%), Query Frame = 1 Query: 4 MVMVHGDDKGLMLPPKVASVQVIDIPVPYKDADTQGIFD 120 ++M HGDD GL+LPPKVA VQV IP+ K A G+ D Sbjct: 273 VIMTHGDDSGLVLPPKVAPVQVDVIPIMQKKA---GVLD 308
BLAST of CX288634 vs. ExPASy Swiss-Prot
Match: SYP2_BACCZ (Prolyl-tRNA synthetase 2 OS=Bacillus cereus (strain ZK / E33L) GN=proS2 PE=3 SV=2) HSP 1 Score: 70.4774 bits (171), Expect = 8.487e-19 Identity = 39/112 (34.82%), Postives = 58/112 (51.79%), Query Frame = 2 Query: 188 NYSPGWKYSHWEMKGVPLMIEIGPKDLANDQVRAVRRDNGAKIDLPMGSXXXXXXXXXXXXXXSLFVAAKQRRDACIQIVKTWDEFVEALGQRK-MILAPWCDEEEVEKDVK 520 N +PGWK++ +EMKG+P+ +E+GPKD+ +QV VRRD K + M SLF AK RD V ++E + +++ I A WC E E+ +K Sbjct: 327 NKTPGWKFNEYEMKGIPIRLEVGPKDIEKNQVVLVRRDTKEKEFISMDQLEERIPALLEEIHNSLFNKAKVFRDENTYSVTNFEEMKKIADEKQGFIKAMWCGELACEEKLK 438 HSP 2 Score: 43.1282 bits (100), Expect = 8.487e-19 Identity = 16/27 (59.26%), Postives = 24/27 (88.89%), Query Frame = 1 Query: 4 MVMVHGDDKGLMLPPKVASVQVIDIPV 84 ++MVHGD+ GL++PPKVA VQV+ +P+ Sbjct: 271 LIMVHGDNNGLVMPPKVAPVQVVIVPI 297
BLAST of CX288634 vs. ExPASy Swiss-Prot
Match: SYP_CLOPH (Prolyl-tRNA synthetase OS=Clostridium phytofermentans (strain ATCC 700394 / DSM 18823 / ISDg) GN=proS PE=3 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 1.104e-18 Identity = 35/113 (30.97%), Postives = 55/113 (48.67%), Query Frame = 2 Query: 194 SPGWKYSHWEMKGVPLMIEIGPKDLANDQVRAVRRDNGAKIDLPMGSXXXXXXXXXXXXXXSLFVAAKQRRDACIQIVKTWDEFVEALGQRK-MILAPWCDEEEVEKDVKART 529 SPGWK+S EM+G+P+ +EIGPKD+ +Q VRRD K + + + A+ RDA + +EF + + + + A WC E E ++K +T Sbjct: 330 SPGWKFSEHEMRGIPVRVEIGPKDIEANQAVLVRRDTREKTVVSLDEIDTKIGEILEAMQKEMLERARNHRDAHTYEAHSTEEFADVVANKPGFVKAMWCGERACEDEIKEKT 442 HSP 2 Score: 43.8986 bits (102), Expect = 1.104e-18 Identity = 19/48 (39.58%), Postives = 31/48 (64.58%), Query Frame = 1 Query: 4 MVMVHGDDKGLMLPPKVASVQVIDIPVPYKDADTQGIFDACTATVEKL 147 ++MVHGD+ GL+LPP++A QV+ +P+ K +G+ + EKL Sbjct: 273 LIMVHGDNSGLVLPPRIAPTQVVIVPIMQK---KEGVLEKAAELREKL 317
BLAST of CX288634 vs. ExPASy Swiss-Prot
Match: SYP_CHLL2 (Prolyl-tRNA synthetase OS=Chlorobium limicola (strain DSM 245 / NBRC 103803) GN=proS PE=3 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 1.435e-18 Identity = 42/126 (33.33%), Postives = 66/126 (52.38%), Query Frame = 2 Query: 158 GIRANSDFIDNYSPGWKYSHWEMKGVPLMIEIGPKDLANDQVRAVRRDNGAKIDLPM-GSXXXXXXXXXXXXXXSLFVAAKQRRDACIQIVKTWDEFVEALGQRKMILAPWCDEEEVEKDVKARTK 532 GI A D D SPGWK++ +E++G+PL IE+GP+DLA + RRD K +LP+ + +L+ A R+ VK+++EF A+ + ++A W +E E +K TK Sbjct: 316 GIPAFVDSSDQNSPGWKFAEYELQGIPLRIELGPRDLAGKKCVVARRDTLEKTELPLDDTFSMQVSEILNSIQQNLYDRALSFRNEKTVEVKSYEEFKTAV-ENGFVIAHWDGTDETESKIKEETK 440 HSP 2 Score: 41.2022 bits (95), Expect = 1.435e-18 Identity = 16/27 (59.26%), Postives = 23/27 (85.19%), Query Frame = 1 Query: 4 MVMVHGDDKGLMLPPKVASVQVIDIPV 84 ++M H DD+GL+LPPK+AS QV+ IP+ Sbjct: 267 LIMAHSDDRGLVLPPKLASRQVVVIPI 293 The following BLAST results are available for this feature:
BLAST of CX288634 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 136
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Sequences
The
following sequences are available for this feature:
EST sequence >CX288634 ID=CX288634; Name=CX288634; organism=Citrus clementina; type=EST; length=547bpback to top |