CX288634
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX288634 vs. ExPASy Swiss-Prot
Match: SYP_CHLCH (Prolyl-tRNA synthetase OS=Chlorobium chlorochromatii (strain CaD3) GN=proS PE=3 SV=1) HSP 1 Score: 66.2402 bits (160), Expect = 2.099e-16 Identity = 41/140 (29.29%), Postives = 67/140 (47.86%), Query Frame = 2 Query: 116 LMHALQLLKN*CEAGIRANSDFIDNYSPGWKYSHWEMKGVPLMIEIGPKDLANDQVRAVRRDNGAKIDLPMGS-XXXXXXXXXXXXXXSLFVAAKQRRDACIQIVKTWDEFVEALGQRKMILAPWCDEEEVEKDVKARTK 532 L HA + +AGI A D + SPGWK++ +E++G+PL +E+GP+D+ N RRD K ++ + +F AA + R V +D+F A+ ++ ++A W E E +K TK Sbjct: 302 LHHADNIAAALTKAGISAFVDSSEQNSPGWKFAEYELQGIPLRLELGPRDIKNGMCVVARRDTLEKTEIALDDRLVMSINEILNDIQQDMFDAALRFRQERTVQVNNYDDFKVAV-EKGFVIAHWDGTVETEAKIKEETK 440 HSP 2 Score: 39.2762 bits (90), Expect = 2.099e-16 Identity = 15/34 (44.12%), Postives = 26/34 (76.47%), Query Frame = 1 Query: 4 MVMVHGDDKGLMLPPKVASVQVIDIPVPYKDADT 105 ++M H DD+GL+LPP++A+ QV+ IP+ D ++ Sbjct: 267 LIMAHSDDRGLVLPPRLATRQVVIIPILKGDKES 300
BLAST of CX288634 vs. ExPASy Swiss-Prot
Match: SYP_ROSS1 (Prolyl-tRNA synthetase OS=Roseiflexus sp. (strain RS-1) GN=proS PE=3 SV=1) HSP 1 Score: 63.1586 bits (152), Expect = 2.100e-16 Identity = 41/145 (28.28%), Postives = 66/145 (45.52%), Query Frame = 2 Query: 107 KEFLMHALQLLKN*CEAGIRANSDFIDNYSPGWKYSHWEMKGVPLMIEIGPKDLANDQVRAVRRD---NGAKIDLPMGSXXXXXXXXXXXXXXSLFVAAKQRRDACIQIVKTWDEFVEALGQRKMILAPWCDEEEVEKDVKARTK 532 + +M A+Q + + +R D DN +PG+K++ WE+KGVP+ +EIGPKD+ V RRD K +P +L+ A R+ V T+DE + + +R W E EK ++ T+ Sbjct: 303 RSVVMEAVQRMTAEWKGRLRFKIDDRDNLTPGFKFNEWELKGVPIRVEIGPKDIEKGSVAIARRDQPGREGKSFVPQDGLTDRLTALLEEIQQALYRRALTFREDHTADVATYDELKQQV-ERGFARCYWAGTTEDEKRIQEETR 446 HSP 2 Score: 42.3578 bits (98), Expect = 2.100e-16 Identity = 15/40 (37.50%), Postives = 28/40 (70.00%), Query Frame = 1 Query: 4 MVMVHGDDKGLMLPPKVASVQVIDIPVPYKDADTQGIFDA 123 ++M H DD+GL++PP++A QV+ +P+ DA+ + +A Sbjct: 270 LIMTHSDDEGLVIPPRLAPTQVVVVPIYRNDAERSVVMEA 309
BLAST of CX288634 vs. ExPASy Swiss-Prot
Match: SYP_THENV (Prolyl-tRNA synthetase OS=Thermoproteus neutrophilus (strain DSM 2338 / JCM 9278 / V24Sta) GN=proS PE=3 SV=1) HSP 1 Score: 64.6994 bits (156), Expect = 2.728e-16 Identity = 37/134 (27.61%), Postives = 68/134 (50.75%), Query Frame = 2 Query: 101 ILKEFLMHALQLLKN*CEAGIRANSDFIDNYSPGWKYSHWEMKGVPLMIEIGPKDLANDQVRAVRRDNGAKIDLPMGSXXXXXXXXXXXXXXSLFVAAKQRRDACIQIVKTWDEFVEALGQRKMILAPWCDEEE 502 ++ +F+ + LK AG+R + D + +PGWK+ +WE+KGVPL +E+G +D+ QV RRD K + +G +L A + + I V++ +E +A+ + K++ PW + + Sbjct: 308 LVMKFVEEVVAALKG---AGLRLHVDDRRDKTPGWKFYYWELKGVPLRLEVGKRDVEKRQVVVTRRDTLEKYAVALGELVDAVRELMKAVEDNLRRRAWEELRSKIVKVQSLEEAKKAIKEGKVVEVPWSGDNQ 438 HSP 2 Score: 40.4318 bits (93), Expect = 2.728e-16 Identity = 15/33 (45.45%), Postives = 23/33 (69.70%), Query Frame = 1 Query: 4 MVMVHGDDKGLMLPPKVASVQVIDIPVPYKDAD 102 M++ HGDD G LPPK+A +Q+ +P+ Y D + Sbjct: 273 MLITHGDDGGTTLPPKLAPIQIAVVPIYYSDEE 305
BLAST of CX288634 vs. ExPASy Swiss-Prot
Match: SYP_PROA2 (Prolyl-tRNA synthetase OS=Prosthecochloris aestuarii (strain DSM 271 / SK 413) GN=proS PE=3 SV=1) HSP 1 Score: 65.0846 bits (157), Expect = 2.729e-16 Identity = 40/128 (31.25%), Postives = 63/128 (49.22%), Query Frame = 2 Query: 152 EAGIRANSDFIDNYSPGWKYSHWEMKGVPLMIEIGPKDLANDQVRAVRRDNGAKIDLPM-GSXXXXXXXXXXXXXXSLFVAAKQRRDACIQIVKTWDEFVEALGQRKMILAPWCDEEEVEKDVKARTK 532 + GI A D D SPGWK++ +E++G+P+ +E+GP+D+ + A RRD G K L + S +LF A R+ V ++ EF +A ++A W +E E +K TK Sbjct: 314 QKGIAAFVDDSDQNSPGWKFAEYELQGIPVRLELGPRDIQSSTCIAARRDTGEKSKLQLDSSLADQINSLLESIQTNLFNRALSFREKHTLEVSSYSEF-KANIDNGFLVAHWDGTDETEAKIKEETK 440 HSP 2 Score: 40.0466 bits (92), Expect = 2.729e-16 Identity = 15/27 (55.56%), Postives = 23/27 (85.19%), Query Frame = 1 Query: 4 MVMVHGDDKGLMLPPKVASVQVIDIPV 84 ++M H DD+GL+LPPK+A+ QV+ IP+ Sbjct: 267 LIMAHSDDRGLVLPPKLATRQVVIIPI 293
BLAST of CX288634 vs. ExPASy Swiss-Prot
Match: SYP_PELPB (Prolyl-tRNA synthetase OS=Pelodictyon phaeoclathratiforme (strain DSM 5477 / BU-1) GN=proS PE=3 SV=1) HSP 1 Score: 64.6994 bits (156), Expect = 2.729e-16 Identity = 43/137 (31.39%), Postives = 70/137 (51.09%), Query Frame = 2 Query: 125 ALQLLKN*CEAGIRANSDFIDNYSPGWKYSHWEMKGVPLMIEIGPKDLANDQVRAVRRDNGAKIDLPMG-SXXXXXXXXXXXXXXSLFVAAKQRRDACIQIVKTWDEFVEALGQRKMILAPWCDEEEVEKDVKARTK 532 A +L KN GI + D + SPGWK++ +E++G+P+ IE+GP+D+ A RRD K +L + + S+F A Q R V++++EF A+ ++ ++A W E E +KA TK Sbjct: 309 AQELNKN----GIPSFVDSSEQNSPGWKFAEYELQGIPIRIELGPRDIEKGICIAARRDTLEKTELALDETLPDQISEILNTIQESMFERALQFRTEHTFEVQSYEEFKVAV-EKGFVIAHWDGTAETEAKIKAETK 440 HSP 2 Score: 40.4318 bits (93), Expect = 2.729e-16 Identity = 18/48 (37.50%), Postives = 30/48 (62.50%), Query Frame = 1 Query: 4 MVMVHGDDKGLMLPPKVASVQVIDIPVPYKDADTQGIFDACTATVEKL 147 ++M H DD+GL+LPPK+A+ QV+ IP+ D + + A ++L Sbjct: 267 LIMAHSDDRGLVLPPKLATRQVVIIPI--LRGDKAAVIERANALAQEL 312
BLAST of CX288634 vs. ExPASy Swiss-Prot
Match: SYP_PYRCJ (Prolyl-tRNA synthetase OS=Pyrobaculum calidifontis (strain JCM 11548 / VA1) GN=proS PE=3 SV=1) HSP 1 Score: 63.929 bits (154), Expect = 3.545e-16 Identity = 35/117 (29.91%), Postives = 58/117 (49.57%), Query Frame = 2 Query: 152 EAGIRANSDFIDNYSPGWKYSHWEMKGVPLMIEIGPKDLANDQVRAVRRDNGAKIDLPMGSXXXXXXXXXXXXXXSLFVAAKQRRDACIQIVKTWDEFVEALGQRKMILAPWCDEEE 502 EAG R + D D+ +PGWK+ +WE++GVPL +E+G +D+ QV RRD AK + + +L A + I V+T + A+ + K++ PW + + Sbjct: 323 EAGFRVHVDGRDDKTPGWKFYYWELRGVPLRVEVGKRDVEGRQVVVARRDTLAKYAVAVDELVDAVKALLSEVEANLRRRAVEELRGRIVRVETVEAARAAIREGKVVELPWSGDND 439 HSP 2 Score: 40.817 bits (94), Expect = 3.545e-16 Identity = 16/48 (33.33%), Postives = 29/48 (60.42%), Query Frame = 1 Query: 4 MVMVHGDDKGLMLPPKVASVQVIDIPVPYKDADTQGIFDACTATVEKL 147 M++ HGDD G ++PPK+A +QV+ +P+ Y + + + A + L Sbjct: 274 MLITHGDDAGTVIPPKLAPIQVVVVPIFYGEEEKGVVMPAAEQAAKAL 321
BLAST of CX288634 vs. ExPASy Swiss-Prot
Match: SYP_CHLTE (Prolyl-tRNA synthetase OS=Chlorobium tepidum GN=proS PE=3 SV=1) HSP 1 Score: 62.003 bits (149), Expect = 4.609e-16 Identity = 39/126 (30.95%), Postives = 61/126 (48.41%), Query Frame = 2 Query: 158 GIRANSDFIDNYSPGWKYSHWEMKGVPLMIEIGPKDLANDQVRAVRRDNGAKIDLPM-GSXXXXXXXXXXXXXXSLFVAAKQRRDACIQIVKTWDEFVEALGQRKMILAPWCDEEEVEKDVKARTK 532 GI D +N SPGWK++ +E++G+P+ IE+GP+DL + RRD K +L + +L+ A Q R TW+EF +A ++ ++A W E E +K TK Sbjct: 316 GIPTFVDDSENNSPGWKFAEYELQGIPVRIELGPRDLEQGKCIVARRDTFEKTELLLDDELTINIEEILNNIQQNLYDRALQFRLDNTVEATTWEEF-KASVEKGFVIAHWDGTHETEALIKEETK 440 HSP 2 Score: 42.3578 bits (98), Expect = 4.609e-16 Identity = 17/27 (62.96%), Postives = 23/27 (85.19%), Query Frame = 1 Query: 4 MVMVHGDDKGLMLPPKVASVQVIDIPV 84 ++M H DDKGL+LPPK+AS QV+ IP+ Sbjct: 267 LIMAHSDDKGLVLPPKLASRQVVIIPI 293
BLAST of CX288634 vs. ExPASy Swiss-Prot
Match: SYP_HALSA (Prolyl-tRNA synthetase OS=Halobacterium salinarium GN=proS PE=3 SV=2) HSP 1 Score: 65.855 bits (159), Expect = 5.986e-16 Identity = 34/129 (26.36%), Postives = 62/129 (48.06%), Query Frame = 2 Query: 158 GIRANSDFIDNYSPGWKYSHWEMKGVPLMIEIGPKDLANDQVRAVRRDNGAKIDLPMGSXXXXXXXXXXXXXXSLFVAAKQRRDACIQIVKTWDEFVEALGQR-KMILAPWCDEEEVEKDVKARTKGEM 541 G+R + D D +PG+K++ WE+ GVP+ EIGP ++ +D+V V R +G + L+ AA R ++ + + +GQ + APWC +++ E ++K + E+ Sbjct: 324 GVRVHFDDRDGRNPGFKFNEWELNGVPVRFEIGPNEVEDDEVTVVHRPDGESTVEDRAAIADRVHDHLDEVYDKLYDAAADRLAENVREADNRADILGTIGQHGGYVKAPWCGDQDCEAEIKDQIAAEI 452 HSP 2 Score: 38.1206 bits (87), Expect = 5.986e-16 Identity = 16/31 (51.61%), Postives = 23/31 (74.19%), Query Frame = 1 Query: 4 MVMVHGDDKGLMLPPKVASVQVIDIPVPYKD 96 +VM H DD+GL+LPP VA QV+ +P+ +D Sbjct: 274 LVMSHSDDQGLVLPPTVAPKQVVIVPIWQED 304
BLAST of CX288634 vs. ExPASy Swiss-Prot
Match: SYP_HALS3 (Prolyl-tRNA synthetase OS=Halobacterium salinarum (strain ATCC 29341 / DSM 671 / R1) GN=proS PE=3 SV=1) HSP 1 Score: 65.855 bits (159), Expect = 5.986e-16 Identity = 34/129 (26.36%), Postives = 62/129 (48.06%), Query Frame = 2 Query: 158 GIRANSDFIDNYSPGWKYSHWEMKGVPLMIEIGPKDLANDQVRAVRRDNGAKIDLPMGSXXXXXXXXXXXXXXSLFVAAKQRRDACIQIVKTWDEFVEALGQR-KMILAPWCDEEEVEKDVKARTKGEM 541 G+R + D D +PG+K++ WE+ GVP+ EIGP ++ +D+V V R +G + L+ AA R ++ + + +GQ + APWC +++ E ++K + E+ Sbjct: 324 GVRVHFDDRDGRNPGFKFNEWELNGVPVRFEIGPNEVEDDEVTVVHRPDGESTVEDRAAIADRVHDHLDEVYDKLYDAAADRLAENVREADNRADILGTIGQHGGYVKAPWCGDQDCEAEIKDQIAAEI 452 HSP 2 Score: 38.1206 bits (87), Expect = 5.986e-16 Identity = 16/31 (51.61%), Postives = 23/31 (74.19%), Query Frame = 1 Query: 4 MVMVHGDDKGLMLPPKVASVQVIDIPVPYKD 96 +VM H DD+GL+LPP VA QV+ +P+ +D Sbjct: 274 LVMSHSDDQGLVLPPTVAPKQVVIVPIWQED 304
BLAST of CX288634 vs. ExPASy Swiss-Prot
Match: SYP_CYTH3 (Prolyl-tRNA synthetase OS=Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB 9469) GN=proS PE=3 SV=1) HSP 1 Score: 63.929 bits (154), Expect = 5.988e-16 Identity = 38/125 (30.40%), Postives = 56/125 (44.80%), Query Frame = 2 Query: 161 IRANSDFIDNYSPGWKYSHWEMKGVPLMIEIGPKDLANDQVRAVRRDNGAKIDLPMGSXXXXXXXXXXXXXXSLFVAAKQRRDACIQIVKTWDEFVEALGQRK-MILAPWCDEEEVEKDVKARTK 532 I D D YSPG+K++ +E+KGVPL + IG +D+ N V RRD K +P +++ A R+A + + F L + ILA W E E+ +K TK Sbjct: 333 ISVKFDHSDKYSPGFKFAEYELKGVPLRVAIGARDIENGTVELARRDTKEKTTVPQEGLADTIEKLLQEIQENIYKKAFAYREANTFVADDYTTFKTMLDETPGFILAHWDGTPETEEKIKEETK 457 HSP 2 Score: 40.0466 bits (92), Expect = 5.988e-16 Identity = 16/40 (40.00%), Postives = 29/40 (72.50%), Query Frame = 1 Query: 4 MVMVHGDDKGLMLPPKVASVQVIDIPVPYKDADTQGIFDA 123 ++M H DD+GL+LPP +A +QV+ +P+ +K A+ + +A Sbjct: 281 LIMAHSDDEGLVLPPLLAPIQVVIVPI-FKTAEQLDLIEA 319 The following BLAST results are available for this feature:
BLAST of CX288634 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 136
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Sequences
The
following sequences are available for this feature:
EST sequence >CX288634 ID=CX288634; Name=CX288634; organism=Citrus clementina; type=EST; length=547bpback to top |