CX288634
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX288634 vs. ExPASy Swiss-Prot
Match: SYP2_RHOSR (Prolyl-tRNA synthetase 2 OS=Rhodococcus sp. (strain RHA1) GN=proS2 PE=3 SV=2) HSP 1 Score: 64.3142 bits (155), Expect = 5.992e-16 Identity = 40/126 (31.75%), Postives = 64/126 (50.79%), Query Frame = 2 Query: 158 GIRANSDFIDNYSPGWKYSHWEMKGVPLMIEIGPKDLANDQVRAVRR--DNGAKIDLPMGSXXXXXXXXXXXXXXSLFVAAKQRRDACIQIVKTWDEFVEALGQRKMILAPWCDEEEVEKDVKART 529 G+R + D + +PG+KY+ WEM+GVP+ +E+GP+DL + V V+R D+G K +P+ S L A RD + V W +F +A+ LA C E+++K+ T Sbjct: 319 GVRTHVDARPHLTPGFKYNEWEMRGVPVRLELGPRDLEDGTVMMVKRLGDDG-KQAVPIDSLPEAMPGVLDDFQAFLLARATAFRDGHARTVDNWTDFADAV-STGWALALHCGIAACEEEIKSLT 442 HSP 2 Score: 39.6614 bits (91), Expect = 5.992e-16 Identity = 15/27 (55.56%), Postives = 22/27 (81.48%), Query Frame = 1 Query: 4 MVMVHGDDKGLMLPPKVASVQVIDIPV 84 +VM HGDDKGL+ PP++A QV+ +P+ Sbjct: 270 IVMTHGDDKGLVFPPRLAPHQVVIVPI 296
BLAST of CX288634 vs. ExPASy Swiss-Prot
Match: SYP_FLAJ1 (Prolyl-tRNA synthetase OS=Flavobacterium johnsoniae (strain ATCC 17061 / DSM 2064 / UW101) GN=proS PE=3 SV=1) HSP 1 Score: 62.7734 bits (151), Expect = 7.782e-16 Identity = 39/113 (34.51%), Postives = 53/113 (46.90%), Query Frame = 2 Query: 197 PGWKYSHWEMKGVPLMIEIGPKDLANDQVRAVRRDNGAKIDLPMGSXXXXXXXXXXXXXXSLFVAAKQRRDACIQIVKTWDEFVEAL-GQRKMILAPWCDEEEVEKDVKARTK 532 PG+K++ WE+KGVP+ I +GPKDL N RRDN +K + LF A R+ I V ++EF E L G+ I A W E+ +K TK Sbjct: 346 PGFKFAEWELKGVPVRIAVGPKDLENGTFEVARRDNLSKEVVAAEKIVDHVNDLLEQIQKDLFDKALTYRNTHITEVNNFEEFKEVLEGKGGFISAHWDGTAATEEKIKDLTK 458 HSP 2 Score: 40.817 bits (94), Expect = 7.782e-16 Identity = 18/48 (37.50%), Postives = 27/48 (56.25%), Query Frame = 1 Query: 4 MVMVHGDDKGLMLPPKVASVQVIDIPVPYKDADTQGIFDACTATVEKL 147 ++M H DD+GL+LPP +A +QV+ +P+ D I A KL Sbjct: 282 LIMTHSDDQGLVLPPNLAPIQVVIVPIHKTDEQLAQITAAVNELTAKL 329
BLAST of CX288634 vs. ExPASy Swiss-Prot
Match: SYP_PELLD (Prolyl-tRNA synthetase OS=Pelodictyon luteolum (strain DSM 273) GN=proS PE=3 SV=1) HSP 1 Score: 62.3882 bits (150), Expect = 7.786e-16 Identity = 37/127 (29.13%), Postives = 64/127 (50.39%), Query Frame = 2 Query: 155 AGIRANSDFIDNYSPGWKYSHWEMKGVPLMIEIGPKDLANDQVRAVRRDNGAKIDLPMG-SXXXXXXXXXXXXXXSLFVAAKQRRDACIQIVKTWDEFVEALGQRKMILAPWCDEEEVEKDVKARTK 532 AGI A D + SPGWK++ +E++G+P+ IE+GP+D+ A RRD K +L +G + ++ A R+ +++EF A+ ++ ++A W E E+ +K TK Sbjct: 315 AGIPAFVDGSEQNSPGWKFAEYELQGIPVRIEVGPRDIEKGICIAARRDTLEKSELQLGETLPGAVQEILDAMQKDMYQKALLFREENTVEASSYEEFKAAV-EKGFVIAHWDGTAETEEKIKEETK 440 HSP 2 Score: 41.2022 bits (95), Expect = 7.786e-16 Identity = 16/27 (59.26%), Postives = 23/27 (85.19%), Query Frame = 1 Query: 4 MVMVHGDDKGLMLPPKVASVQVIDIPV 84 ++M H DD+GL+LPPK+AS QV+ IP+ Sbjct: 267 LIMAHSDDRGLVLPPKLASRQVVIIPI 293
BLAST of CX288634 vs. ExPASy Swiss-Prot
Match: SYP_METTP (Prolyl-tRNA synthetase OS=Methanosaeta thermophila (strain DSM 6194 / PT) GN=proS PE=3 SV=1) HSP 1 Score: 61.6178 bits (148), Expect = 7.787e-16 Identity = 42/119 (35.29%), Postives = 59/119 (49.58%), Query Frame = 2 Query: 197 PGWKYSHWEMKGVPLMIEIGPKDLANDQVRAVRRDNGAKIDLPMGSXXXXXXXXXXXXXXS-LFVAAKQRRDACIQIVKTWDEFVEALGQRKMILAPWCDEEE----VEKDVKARTKGE 538 PG K+ WEM+GVP+ IEIGP+D+ N V VRRD G + LPM + L+ AK+ D+ I++V + DE + Q + PWC E +E + A GE Sbjct: 334 PGAKFYKWEMRGVPVRIEIGPRDIKNGVVTIVRRD-GVRKTLPMDERLVDAILIEAEELQTVLYNRAKEFMDSKIKLVSSLDE-ARSQVQSGVARVPWCGSVECGHALEDQIGANLLGE 450 HSP 2 Score: 41.9726 bits (97), Expect = 7.787e-16 Identity = 19/48 (39.58%), Postives = 31/48 (64.58%), Query Frame = 1 Query: 4 MVMVHGDDKGLMLPPKVASVQVIDIPVPYKDADTQGIFDACTATVEKL 147 ++ VHGDDKGL+LP +VA VQV+ +P+ + + + I + C + L Sbjct: 273 LIAVHGDDKGLVLPWRVAPVQVVIVPIIF--GEREPIIEVCRSIASTL 318
BLAST of CX288634 vs. ExPASy Swiss-Prot
Match: SYP_METLZ (Prolyl-tRNA synthetase OS=Methanocorpusculum labreanum (strain ATCC 43576 / DSM 4855 / Z) GN=proS PE=3 SV=1) HSP 1 Score: 65.0846 bits (157), Expect = 7.788e-16 Identity = 38/129 (29.46%), Postives = 63/129 (48.84%), Query Frame = 2 Query: 155 AGIRANSDFIDNYSPGWKYSHWEMKGVPLMIEIGPKDLANDQVRAVRRDNGAKIDLPMGSXXXXXXXXXXXXXXSLFVAAKQRRDACIQIVKTWDEFVEALGQRKMILAPWCDEEEVEKDVKARTKGEM 541 AG+R +D D PG KY HWE+ GVPL +E+GP+DL N+Q+ R G K +P + + A+ + ++ VKT DE ++L + +++ WC E+ ++ T + Sbjct: 319 AGLRVKTDARD-MRPGAKYYHWELHGVPLRVELGPRDLDNNQLVCANR-LGVKTTIPRENAADSVKRLLDEAHDQILEKAEDHLSSHLKTVKTVDECNQSL-EENIVIVHWCGEKACADKLEELTNSSL 444 HSP 2 Score: 38.5058 bits (88), Expect = 7.788e-16 Identity = 16/27 (59.26%), Postives = 21/27 (77.78%), Query Frame = 1 Query: 4 MVMVHGDDKGLMLPPKVASVQVIDIPV 84 ++ VHGDDKGL+LP VA QV+ IP+ Sbjct: 270 IIAVHGDDKGLVLPATVAPTQVVIIPI 296
BLAST of CX288634 vs. ExPASy Swiss-Prot
Match: SYP_PYRAR (Prolyl-tRNA synthetase OS=Pyrobaculum arsenaticum (strain DSM 13514 / JCM 11321) GN=proS PE=3 SV=1) HSP 1 Score: 62.7734 bits (151), Expect = 1.012e-15 Identity = 37/129 (28.68%), Postives = 63/129 (48.84%), Query Frame = 2 Query: 116 LMHALQLLKN*CEAGIRANSDFIDNYSPGWKYSHWEMKGVPLMIEIGPKDLANDQVRAVRRDNGAKIDLPMGSXXXXXXXXXXXXXXSLFVAAKQRRDACIQIVKTWDEFVEALGQRKMILAPWCDEEE 502 + +A ++ K EAG+R + D + +PGWK+ WE+KGVPL +E+G +DL QV RRD K + +G +L A + + I +T + A+ + K++ PW + + Sbjct: 311 ISYAREVEKALREAGMRVHIDDRPDKTPGWKFYFWELKGVPLRVEVGKRDLEKRQVVITRRDTLEKYAVGLGELVDAVRGLMRTVEENLRRRAWEELRSRIVRAETVEAAKAAIREGKVVEVPWSGDND 439 HSP 2 Score: 40.4318 bits (93), Expect = 1.012e-15 Identity = 14/37 (37.84%), Postives = 26/37 (70.27%), Query Frame = 1 Query: 4 MVMVHGDDKGLMLPPKVASVQVIDIPVPYKDADTQGI 114 M++ HGDD G +LPP++A +QV+ +P+ Y + + + Sbjct: 274 MLITHGDDAGTVLPPRLAPIQVVIVPIFYGEEEAASV 310
BLAST of CX288634 vs. ExPASy Swiss-Prot
Match: SYP_CALMQ (Prolyl-tRNA synthetase OS=Caldivirga maquilingensis (strain DSMZ 13496 / IC-167) GN=proS PE=3 SV=1) HSP 1 Score: 61.2326 bits (147), Expect = 1.012e-15 Identity = 25/53 (47.17%), Postives = 36/53 (67.92%), Query Frame = 2 Query: 155 AGIRANSDFIDNYSPGWKYSHWEMKGVPLMIEIGPKDLANDQVRAVRRDNGAK 313 AG+R + D + +PGWKY HWE+KGVP+ +E+GP D+ ++ V RRD K Sbjct: 319 AGVRVHVDDRRDKTPGWKYYHWELKGVPIRLEVGPSDVKDNAVTLTRRDTFEK 371 HSP 2 Score: 41.9726 bits (97), Expect = 1.012e-15 Identity = 16/29 (55.17%), Postives = 24/29 (82.76%), Query Frame = 1 Query: 4 MVMVHGDDKGLMLPPKVASVQVIDIPVPY 90 M+ V+GDD+GL+LPP+ A +QV+ IP+ Y Sbjct: 271 MIAVNGDDRGLLLPPRYAPIQVVVIPIMY 299
BLAST of CX288634 vs. ExPASy Swiss-Prot
Match: SYP_ROSCS (Prolyl-tRNA synthetase OS=Roseiflexus castenholzii (strain DSM 13941 / HLO8) GN=proS PE=3 SV=1) HSP 1 Score: 60.8474 bits (146), Expect = 1.012e-15 Identity = 40/145 (27.59%), Postives = 66/145 (45.52%), Query Frame = 2 Query: 107 KEFLMHALQLLKN*CEAGIRANSDFIDNYSPGWKYSHWEMKGVPLMIEIGPKDLANDQVRAVRRD---NGAKIDLPMGSXXXXXXXXXXXXXXSLFVAAKQRRDACIQIVKTWDEFVEALGQRKMILAPWCDEEEVEKDVKARTK 532 + +M A+Q + + +R D DN +PG+K++ WE+KGVP+ +EIGPKD+ V RRD K +P +L+ A R+ V T++E + + +R W E EK ++ T+ Sbjct: 303 RSVVMEAVQRMTAEWKGLLRFKVDDRDNLTPGFKFNEWELKGVPIRVEIGPKDIEKGSVAIARRDQPGREGKSFVPQEGLTARLAALLEEIQQALYRRALAFRETHTADVTTYEELKQQV-ERGFARCYWAGTMEDEKRIQEETR 446 HSP 2 Score: 42.3578 bits (98), Expect = 1.012e-15 Identity = 15/40 (37.50%), Postives = 28/40 (70.00%), Query Frame = 1 Query: 4 MVMVHGDDKGLMLPPKVASVQVIDIPVPYKDADTQGIFDA 123 ++M H DD+GL++PP++A QV+ +P+ DA+ + +A Sbjct: 270 LIMTHSDDEGLVIPPRLAPTQVVVVPIYRNDAERSVVMEA 309
BLAST of CX288634 vs. ExPASy Swiss-Prot
Match: SYP_THEVO (Prolyl-tRNA synthetase OS=Thermoplasma volcanium GN=proS PE=3 SV=1) HSP 1 Score: 59.6918 bits (143), Expect = 1.013e-15 Identity = 35/125 (28.00%), Postives = 58/125 (46.40%), Query Frame = 2 Query: 158 GIRANSDFIDNYSPGWKYSHWEMKGVPLMIEIGPKDLANDQVRAVRRDNGAKIDLPMGSXXXXXXXXXXXXXXSLFVAAKQRRDACIQIVKTWDEFVEALGQRKMILAPWCDEEEVEKDVKARTK 532 GIR + D DNY+PG+KY+ WEM+GVPL IE+G ++L V R+ K + + AK+ ++ + + D+F + +I A WC +E ++ T+ Sbjct: 310 GIRCHVDNRDNYTPGYKYNDWEMRGVPLRIEVGERELKEKTVTLAARNIRGKKTVQREKLVYEVPDMLDLVKEKITEDAKKTFNSLVVSASSLDDF----KKEGLIKAFWCGSKECSDKIENETE 430 HSP 2 Score: 43.5134 bits (101), Expect = 1.013e-15 Identity = 15/28 (53.57%), Postives = 24/28 (85.71%), Query Frame = 1 Query: 4 MVMVHGDDKGLMLPPKVASVQVIDIPVP 87 ++ +HGDDKGL+LPP +A +QV+ +P+P Sbjct: 264 IIGIHGDDKGLILPPAIAPIQVVIVPIP 291
BLAST of CX288634 vs. ExPASy Swiss-Prot
Match: SYP_DEIRA (Prolyl-tRNA synthetase OS=Deinococcus radiodurans GN=proS PE=1 SV=1) HSP 1 Score: 56.225 bits (134), Expect = 1.314e-15 Identity = 37/125 (29.60%), Postives = 53/125 (42.40%), Query Frame = 2 Query: 158 GIRANSDFIDNYSPGWKYSHWEMKGVPLMIEIGPKDLANDQVRAVRRDNGAKIDLPMGSXXXXXXXXXXXXXXSLFVAAKQRRDACIQIVKTWDEFVEALGQRKMILAPWCDEEEVEKDVKARTK 532 G+R D D + G+KY+ WE+KGVP+ IE+GP+DL + + R + K LP L A A V ++D F + + A C E EK +K TK Sbjct: 334 GLRVKVDGRDGVTNGFKYNDWELKGVPVRIELGPRDLESGVLVVKNRHSEDKETLPRAEAVSGMSARLDTIHDFLMKRATDFLLANTAEVDSYDAFQREIEAGHWVRAYHCGEPACEKSIKEDTK 458 HSP 2 Score: 46.595 bits (109), Expect = 1.314e-15 Identity = 23/48 (47.92%), Postives = 30/48 (62.50%), Query Frame = 1 Query: 4 MVMVHGDDKGLMLPPKVASVQVIDIPVPYKDADTQGIFDACTATVEKL 147 ++M HGDD GLM+PP++A +QV+ IPV KD FD EKL Sbjct: 284 IIMTHGDDSGLMMPPRIAPIQVVVIPVGRKDN-----FDQMVQEGEKL 326 The following BLAST results are available for this feature:
BLAST of CX288634 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 136
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Sequences
The
following sequences are available for this feature:
EST sequence >CX288634 ID=CX288634; Name=CX288634; organism=Citrus clementina; type=EST; length=547bpback to top |