CX288634
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX288634 vs. ExPASy Swiss-Prot
Match: SYP_CLOCE (Prolyl-tRNA synthetase OS=Clostridium cellulolyticum (strain ATCC 35319 / DSM 5812 / JCM 6584 / H10) GN=proS PE=3 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 1.541e-15 Identity = 52/142 (36.62%), Postives = 68/142 (47.89%), Query Frame = 2 Query: 107 KEFLMHALQLLKN*CEAGIRANSDFIDNYSPGWKYSHWEMKGVPLMIEIGPKDLANDQVRAVRRDNGAKIDLPMGSXXXXXXXXXXXXXXSLFVAAKQRRDACIQIVKTWDEFVEALGQRK-MILAPWCDEEEVEKDVKART 529 KE ++ LK A R D D PGWK+S +EMKGVPL IEIGPKD+ +Q VRRDN KI + + + SL A++ RD I T +EF + + + WC E E E VK +T Sbjct: 303 KEGVLEKANELKQKLSAKFRVKMDDSDKM-PGWKFSEYEMKGVPLRIEIGPKDIEKNQAVLVRRDNREKIFVSLDNLEETVVNTLADVQKSLLEKARELRDKKTYIAATLEEFDQIINSTPGFVKGMWCGERECEDLVKEKT 443
BLAST of CX288634 vs. ExPASy Swiss-Prot
Match: SYP_PYRIL (Prolyl-tRNA synthetase OS=Pyrobaculum islandicum (strain DSM 4184 / JCM 9189) GN=proS PE=3 SV=1) HSP 1 Score: 62.7734 bits (151), Expect = 1.708e-15 Identity = 35/118 (29.66%), Postives = 61/118 (51.69%), Query Frame = 2 Query: 152 EAGIRANSDFIDNYSPGWKYSHWEMKGVPLMIEIGPKDLANDQVRAVRRDNGAKIDLPMGSXXXXXXXXXXXXXXSLFVAA-KQRRDACIQIVKTWDEFVEALGQRKMILAPWCDEEE 502 + GIR + D + +PGWK+ +WE+KGVPL IE+G +D+ QV RRD K + +G +L A + R+ +++ K ++ A+ + K++ PW ++E Sbjct: 323 DVGIRIHIDDRRDKTPGWKFYYWELKGVPLRIEVGRRDIEKRQVVVTRRDTLEKYAVSLGELVDAVKQLMSVVEDNLRKRAWEDLRNRLVKVEKV-EDAKNAIREGKVVEVPWSGDDE 439 HSP 2 Score: 39.6614 bits (91), Expect = 1.708e-15 Identity = 15/33 (45.45%), Postives = 24/33 (72.73%), Query Frame = 1 Query: 4 MVMVHGDDKGLMLPPKVASVQVIDIPVPYKDAD 102 M++ HGDD G LPPK+A +QV+ +P+ Y + + Sbjct: 274 MLITHGDDGGTTLPPKLAPIQVVIVPIFYGEEE 306
BLAST of CX288634 vs. ExPASy Swiss-Prot
Match: SYP_SOLUE (Prolyl-tRNA synthetase OS=Solibacter usitatus (strain Ellin6076) GN=proS PE=3 SV=1) HSP 1 Score: 59.6918 bits (143), Expect = 1.709e-15 Identity = 39/128 (30.47%), Postives = 60/128 (46.88%), Query Frame = 2 Query: 161 IRANSDFIDNYSPGWKYSHWEMKGVPLMIEIGPKDLANDQVRAVRRDNGAKIDLPMGSXXXXXXXXXXXXXXSLFVAAKQRRDACIQIVKTWDEFVEAL--------GQRKMILAPWCDEEEVEKDVK 520 I A D + SPG K+ HWE +GVP+++E+GP+DLA+ ++ RRD G K + L+ AK R A + + +E VEA+ G K ++A DE + +K Sbjct: 316 IGAKVDDREGQSPGAKFFHWERRGVPVVLELGPRDLASGKIVLKRRDTGTKEPIDQSEVGAKVAAALEDMQKGLYTRAKDRMKANTVLANSIEE-VEAILKDATAEKGGGKFVMAHIKDEPACDARLK 442 HSP 2 Score: 42.743 bits (99), Expect = 1.709e-15 Identity = 16/40 (40.00%), Postives = 28/40 (70.00%), Query Frame = 1 Query: 4 MVMVHGDDKGLMLPPKVASVQVIDIPVPYKDADTQGIFDA 123 ++M H DDKGL+LPPK+A V+ + +P+ K+ + + +A Sbjct: 269 LIMTHSDDKGLVLPPKLAPVKSVIVPIYRKEEERAAVLEA 308
BLAST of CX288634 vs. ExPASy Swiss-Prot
Match: SYP_METHJ (Prolyl-tRNA synthetase OS=Methanospirillum hungatei (strain JF-1 / DSM 864) GN=proS PE=3 SV=1) HSP 1 Score: 58.5362 bits (140), Expect = 1.709e-15 Identity = 44/133 (33.08%), Postives = 61/133 (45.86%), Query Frame = 2 Query: 107 KEFLMHALQLLKN*CE-AGIRANSDFIDNYSPGWKYSHWEMKGVPLMIEIGPKDLANDQVRAVRRDNGAKIDLPMGSXXXXXXXXXXXXXXSLFVAAKQRRDACIQIVKTWDEFVEALGQRKMILAPWCDEEE 502 +E +M A +LL+ + AG R D D PG KY +WEM+GVPL +EIGP+DL N V V R +G K LP L AK + +VK + V + + ++ WC E Sbjct: 302 EEEIMQAAELLEKELQNAGYRVKIDTRD-LRPGAKYYYWEMRGVPLRLEIGPRDLDNGVVMGVLR-SGGKESLPRADIIAEVNRKMTEFTAILQERAKTHIKDHLVMVKE-ESLVNEMVSKGVVAVHWCGNRE 431 HSP 2 Score: 43.8986 bits (102), Expect = 1.709e-15 Identity = 17/35 (48.57%), Postives = 27/35 (77.14%), Query Frame = 1 Query: 4 MVMVHGDDKGLMLPPKVASVQVIDIPVPYKDADTQ 108 ++ +HGDD+GLMLPP+VA VQ++ +PV K + + Sbjct: 270 LISMHGDDRGLMLPPEVAPVQIVIVPVIMKKREEE 304
BLAST of CX288634 vs. ExPASy Swiss-Prot
Match: SYP_METMJ (Prolyl-tRNA synthetase OS=Methanoculleus marisnigri (strain ATCC 35101 / DSM 1498 / JR1) GN=proS PE=3 SV=1) HSP 1 Score: 60.8474 bits (146), Expect = 1.709e-15 Identity = 37/109 (33.94%), Postives = 54/109 (49.54%), Query Frame = 2 Query: 197 PGWKYSHWEMKGVPLMIEIGPKDLANDQVRAVRRDNGAKIDLPMGSXXXXXXXXXXXXXXSLFVAAKQRRDACIQIVKTWDEFVEALGQRKMILAPWCDEEEVEKDVKA 523 PG KY HWEM+GVPL +E+GP+D+ + V AV R G K L L AA+Q A I +T +E EA+ + + + WC +E + ++A Sbjct: 332 PGAKYYHWEMRGVPLRVEVGPRDIDANTVVAVAR-TGKKTTLDRRGVVEGITSVLAEFGEDLSQAARQAMAARITAAETLEETAEAV-KSGVAVVHWCGSQECAEKIEA 438 HSP 2 Score: 41.5874 bits (96), Expect = 1.709e-15 Identity = 16/27 (59.26%), Postives = 24/27 (88.89%), Query Frame = 1 Query: 4 MVMVHGDDKGLMLPPKVASVQVIDIPV 84 +V VHGDDKGL+LPP+VA ++V+ +P+ Sbjct: 270 VVSVHGDDKGLVLPPEVAPLEVVIVPI 296
BLAST of CX288634 vs. ExPASy Swiss-Prot
Match: SYP_PHYAS (Prolyl-tRNA synthetase OS=Phytoplasma australiense GN=proS PE=3 SV=1) HSP 1 Score: 59.3066 bits (142), Expect = 1.710e-15 Identity = 35/116 (30.17%), Postives = 58/116 (50.00%), Query Frame = 2 Query: 182 IDNYSPGWKYSHWEMKGVPLMIEIGPKDLANDQVRAVRRDNGAKIDLPMGSXXXXXXXXXXXXXXSLFVAAKQRRDACIQIVKTWDEFVEALGQRKMILAPWCDEEEVEKDVKART 529 + N +PGWK+S +E+KGVPL IEIG +DLA +V +R N +K + + ++ A++ +A + T+ EF + L Q+K +A + E +K T Sbjct: 326 LQNKTPGWKFSQYELKGVPLRIEIGARDLAQGEVTIFQRYNNSKNNFSKNTFKAEIPKLLKTIHDKMYQKAQKHLEANRRQASTYQEFKDHL-QKKGYVAMSISGMDAEIKIKTET 440 HSP 2 Score: 43.1282 bits (100), Expect = 1.710e-15 Identity = 20/48 (41.67%), Postives = 32/48 (66.67%), Query Frame = 1 Query: 4 MVMVHGDDKGLMLPPKVASVQVIDIPVPYKD----ADTQGIFDACTAT 135 ++MVH DD+GL+LPP +A +Q++ IP+ K+ A+ + IFD T Sbjct: 272 LIMVHSDDEGLILPPYIAPIQIVIIPLQPKNELVQAEAKKIFDDLKTT 319
BLAST of CX288634 vs. ExPASy Swiss-Prot
Match: SYP_CHLT3 (Prolyl-tRNA synthetase OS=Chloroherpeton thalassium (strain ATCC 35110 / GB-78) GN=proS PE=3 SV=1) HSP 1 Score: 61.6178 bits (148), Expect = 2.221e-15 Identity = 40/140 (28.57%), Postives = 71/140 (50.71%), Query Frame = 2 Query: 116 LMHALQLLKN*CEAGIRANSDFIDNYSPGWKYSHWEMKGVPLMIEIGPKDLANDQVRAVRRDNGAKIDLPMGSXXXXXXXXXXXXXXS-LFVAAKQRRDACIQIVKTWDEFVEALGQRKMILAPWCDEEEVEKDVKARTK 532 L A++L K AG++ D + +PGWK++ +E++G+P+ IE+GP+D+A + RRD K L + + + LF A + R+ ++V T++E ++A + +A W E E +K TK Sbjct: 302 LEKAVELEKMLKAAGVQVFLDDSEQNTPGWKFAEYELQGIPVRIELGPRDVAAGKCVVARRDTSEKETLEIDTAFPQKIKDLLDSIQTGLFERALRFREEKTKVVTTYEE-LKAQVEVGFAVAHWDGTPETEAKIKEETK 440 HSP 2 Score: 40.4318 bits (93), Expect = 2.221e-15 Identity = 15/27 (55.56%), Postives = 22/27 (81.48%), Query Frame = 1 Query: 4 MVMVHGDDKGLMLPPKVASVQVIDIPV 84 ++M H DDKGL+LPPK+AS Q + +P+ Sbjct: 267 LIMAHSDDKGLVLPPKLASRQAVIVPI 293
BLAST of CX288634 vs. ExPASy Swiss-Prot
Match: SYP_BACV8 (Prolyl-tRNA synthetase OS=Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154) GN=proS PE=3 SV=1) HSP 1 Score: 62.3882 bits (150), Expect = 2.884e-15 Identity = 37/125 (29.60%), Postives = 59/125 (47.20%), Query Frame = 2 Query: 158 GIRANSDFIDNYSPGWKYSHWEMKGVPLMIEIGPKDLANDQVRAVRRDNGAKIDLPMGSXXXXXXXXXXXXXXSLFVAAKQRRDACIQIVKTWDEFVEALGQRKMILAPWCDEEEVEKDVKARTK 532 GI D DN PG+K++ +E+KGVP+ + +G +DL N+ + +RRD K +++ A R+ I V ++D+F E + + ILA W E E +K TK Sbjct: 335 GISVKYDNADNKRPGFKFADYELKGVPVRLVMGGRDLENNTMEVMRRDTLEKETRSCDGIEEYVQQLLEDIQNNIYQKALNYRNEHIVKVDSYDDFKEQIEKGGFILAHWDGTPETEDRIKEETK 459 HSP 2 Score: 39.2762 bits (90), Expect = 2.884e-15 Identity = 17/40 (42.50%), Postives = 27/40 (67.50%), Query Frame = 1 Query: 4 MVMVHGDDKGLMLPPKVASVQVIDIPVPYKDADTQGIFDA 123 ++M H DD GL+LPP +A +QV+ +P+ YK+ + DA Sbjct: 284 LIMTHSDDNGLVLPPHLAPIQVVIVPI-YKNDEMLKKIDA 322
BLAST of CX288634 vs. ExPASy Swiss-Prot
Match: SYP_MYCS5 (Prolyl-tRNA synthetase OS=Mycoplasma synoviae (strain 53) GN=proS PE=3 SV=1) HSP 1 Score: 66.6254 bits (161), Expect = 2.886e-15 Identity = 37/114 (32.46%), Postives = 60/114 (52.63%), Query Frame = 2 Query: 188 NYSPGWKYSHWEMKGVPLMIEIGPKDLANDQVRAVRRDNGAKIDLPMGSXXXXXXXXXXXXXXSLFVAAKQRRDACIQIVKTWDEFVEALGQRKMILAPWCDEEEVEKDVKART 529 N SPG+K S E++GVPL IE+GP+DL N+ V VRRD K + + + +L+ AAKQR + +++F + + K ++ P+C + E ++K T Sbjct: 326 NKSPGFKASQSEIEGVPLRIEVGPRDLENNCVTFVRRDTLEKTKVDLENVKKEVNNYLKLIQNNLYQAAKQRLEENTVYAYNYEDFKKHIVDNKFVVVPFCCVTKKEIEIKEET 439 HSP 2 Score: 35.039 bits (79), Expect = 2.886e-15 Identity = 11/22 (50.00%), Postives = 21/22 (95.45%), Query Frame = 1 Query: 4 MVMVHGDDKGLMLPPKVASVQV 69 ++MVHGD++G+++PPK+A ++V Sbjct: 269 IIMVHGDNRGVIIPPKIAPIKV 290
BLAST of CX288634 vs. ExPASy Swiss-Prot
Match: SYP_HALLT (Prolyl-tRNA synthetase OS=Halorubrum lacusprofundi (strain ATCC 49239 / DSM 5036 / JCM 8891 / ACAM 34) GN=proS PE=3 SV=1) HSP 1 Score: 64.6994 bits (156), Expect = 3.748e-15 Identity = 36/131 (27.48%), Postives = 61/131 (46.56%), Query Frame = 2 Query: 152 EAGIRANSDFIDNYSPGWKYSHWEMKGVPLMIEIGPKDLANDQVRAVRRDNGAKIDLPMGSXXXXXXXXXXXXXXSLFVAAKQRRDACIQIVKTWDEFVEALGQR-KMILAPWCDEEEVEKDVKARTKGEM 541 +AGIR D D +PG+K++ E+ GVPL IEIGP ++ + ++ V R +G + L+ A++ D ++ + + LGQ + APWC +E E+ +K E+ Sbjct: 324 DAGIRVELDDRDGRNPGFKFNEHELNGVPLRIEIGPHEVEDGELTLVHRPDGESVVEDREGVVATVQDHFDEVYAKLYATAEETLDGAVREADDRADILGTLGQHGGYVTAPWCGDEACEEPIKEPMAAEI 454 HSP 2 Score: 36.5798 bits (83), Expect = 3.748e-15 Identity = 14/31 (45.16%), Postives = 23/31 (74.19%), Query Frame = 1 Query: 4 MVMVHGDDKGLMLPPKVASVQVIDIPVPYKD 96 ++M H D++GL+LPP VA QV+ +P+ +D Sbjct: 276 LIMTHSDEQGLVLPPGVAPEQVVVVPIWQED 306 The following BLAST results are available for this feature:
BLAST of CX288634 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 136
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Sequences
The
following sequences are available for this feature:
EST sequence >CX288634 ID=CX288634; Name=CX288634; organism=Citrus clementina; type=EST; length=547bpback to top |