CX288634
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX288634 vs. ExPASy Swiss-Prot
Match: SYP_CHLPD (Prolyl-tRNA synthetase OS=Chlorobium phaeobacteroides (strain DSM 266) GN=proS PE=3 SV=1) HSP 1 Score: 61.2326 bits (147), Expect = 3.750e-15 Identity = 38/126 (30.16%), Postives = 61/126 (48.41%), Query Frame = 2 Query: 158 GIRANSDFIDNYSPGWKYSHWEMKGVPLMIEIGPKDLANDQVRAVRRDNGAKIDLPM-GSXXXXXXXXXXXXXXSLFVAAKQRRDACIQIVKTWDEFVEALGQRKMILAPWCDEEEVEKDVKARTK 532 GI A D + SPGWK++ +E++G+PL IE+GP+D+ N RRD K +L + + +LF A + R+ ++ EF E + + ++A W E E +K TK Sbjct: 316 GIPAFVDDSEQNSPGWKFAEYELQGIPLRIELGPRDIQNGTCIVARRDTLEKTELALDDTLSVSISEILNAIQQNLFDRALEFRNEHTFEASSYSEFREMV-ENGFVIAHWDGTAETEAKIKEETK 440 HSP 2 Score: 40.0466 bits (92), Expect = 3.750e-15 Identity = 15/27 (55.56%), Postives = 23/27 (85.19%), Query Frame = 1 Query: 4 MVMVHGDDKGLMLPPKVASVQVIDIPV 84 ++M H DD+GL+LPPK+A+ QV+ IP+ Sbjct: 267 LIMAHSDDRGLVLPPKLATRQVVIIPI 293
BLAST of CX288634 vs. ExPASy Swiss-Prot
Match: SYP_EUBR3 (Prolyl-tRNA synthetase OS=Eubacterium rectale (strain ATCC 33656 / VPI 0990) GN=proS PE=3 SV=1) HSP 1 Score: 56.9954 bits (136), Expect = 4.874e-15 Identity = 40/133 (30.08%), Postives = 60/133 (45.11%), Query Frame = 2 Query: 137 LKN*CEAGIRANSDFIDNYSPGWKYSHWEMKGVPLMIEIGPKDLANDQVRAVRRDNGAKIDLPMGSXXXXXXXXXXXXXXSLFVAAKQRRDACIQIVKTWDEFVEALGQRK--MILAPWCDEEEVEKDVKART 529 LK+ R D D +PGWK++ E++G+ IEIGPKD+ +Q VRRD KI + + + AK + I ++EF +A+ + K I A WC +E E +K T Sbjct: 313 LKDKLSKDFRVKIDATDK-TPGWKFAAQEVQGISTRIEIGPKDIEKNQCVIVRRDTREKIVVSLDEVNEKLAEVLETMQNDMLEKAKAFLASHINDAHDYNEF-KAIAETKPGFIRAMWCGDEACENKIKEDT 443 HSP 2 Score: 43.8986 bits (102), Expect = 4.874e-15 Identity = 21/48 (43.75%), Postives = 29/48 (60.42%), Query Frame = 1 Query: 4 MVMVHGDDKGLMLPPKVASVQVIDIPVPYKDADTQGIFDACTATVEKL 147 ++MVHGDD GL+LPPK+A QV+ IP+ G+ D +KL Sbjct: 273 IIMVHGDDSGLVLPPKIAPTQVMVIPI---QQQKDGVLDKAYDLKDKL 317
BLAST of CX288634 vs. ExPASy Swiss-Prot
Match: SYP_PROVI (Prolyl-tRNA synthetase OS=Prosthecochloris vibrioformis (strain DSM 265) (strain DSM 265) GN=proS PE=3 SV=1) HSP 1 Score: 60.077 bits (144), Expect = 8.227e-15 Identity = 36/128 (28.12%), Postives = 63/128 (49.22%), Query Frame = 2 Query: 152 EAGIRANSDFIDNYSPGWKYSHWEMKGVPLMIEIGPKDLANDQVRAVRRDNGAKIDLPM-GSXXXXXXXXXXXXXXSLFVAAKQRRDACIQIVKTWDEFVEALGQRKMILAPWCDEEEVEKDVKARTK 532 E GI A D + SPGWK++ +E++G+P+ IE+GP+D+ A RRD K +L + + +F A + R+ + V ++ F A+ + ++A W E E+ +K T+ Sbjct: 314 ENGIPAFVDDSEQNSPGWKFAEYELQGIPVRIEVGPRDIDKGVCIAARRDTLEKTELQLDATLAVQVSGMLSAMQADMFQKALRFREENTREVTDYETFKSAV-EEGFVIAHWDGTAETEEKIKEETR 440 HSP 2 Score: 40.0466 bits (92), Expect = 8.227e-15 Identity = 15/27 (55.56%), Postives = 23/27 (85.19%), Query Frame = 1 Query: 4 MVMVHGDDKGLMLPPKVASVQVIDIPV 84 ++M H DD+GL+LPPK+A+ QV+ IP+ Sbjct: 267 LIMAHSDDRGLVLPPKLATRQVVIIPI 293
BLAST of CX288634 vs. ExPASy Swiss-Prot
Match: SYP_METM5 (Prolyl-tRNA synthetase OS=Methanococcus maripaludis (strain C5 / ATCC BAA-1333) GN=proS PE=3 SV=1) HSP 1 Score: 62.3882 bits (150), Expect = 8.237e-15 Identity = 46/156 (29.49%), Postives = 76/156 (48.72%), Query Frame = 2 Query: 107 KEFLMHALQLLKN*CEAGIRANSDFIDNYSPGWKYSHWEMKGVPLMIEIGPKDLANDQVRAVRRDNGAKIDLPMGSXXXXXXXXXXXXXXSLFVAAKQRRDACIQIVKTWDEFVEALGQ---------RKMILAPWCD---EEEVEKDVKARTKGE 538 +E +M ++ L N ++ R + D D PG KY+ WE+KGVPL IE+GP+D+ N Q VRRD G KI + + +L + A ++ + +V ++ V AL + + +IL P+ + EE E+ + A G+ Sbjct: 292 EEIVMDKIKELNNTLKSEFRVHLDDRD-IRPGRKYNDWEIKGVPLRIELGPRDIENGQALIVRRDTGEKITVEYSNILEEVEKIVSMYKENLKIKADEKIKNFLTVV-NFESDVNALSEKVKAALLENKGIILIPFDESVYNEEFEELIDASVLGQ 445 HSP 2 Score: 37.7354 bits (86), Expect = 8.237e-15 Identity = 14/30 (46.67%), Postives = 24/30 (80.00%), Query Frame = 1 Query: 4 MVMVHGDDKGLMLPPKVASVQVIDIPVPYK 93 ++ VHGD+KGL++P VA +Q++ IP+ +K Sbjct: 260 LISVHGDEKGLVIPVDVAPIQIVLIPLLFK 289
BLAST of CX288634 vs. ExPASy Swiss-Prot
Match: SYP_METMP (Prolyl-tRNA synthetase OS=Methanococcus maripaludis GN=proS PE=3 SV=1) HSP 1 Score: 62.003 bits (149), Expect = 1.070e-14 Identity = 47/154 (30.52%), Postives = 76/154 (49.35%), Query Frame = 2 Query: 107 KEFLMHALQLLKN*CEAGIRANSDFIDNYSPGWKYSHWEMKGVPLMIEIGPKDLANDQVRAVRRDNGAKIDLPMGSXXXXXXXXXXXXXXSLFVAAKQRRDACIQI------VKTWDEFVEA--LGQRKMILAPWCD---EEEVEKDVKARTKG 535 +E +M ++ L N ++ R + D D PG KY+ WE+KGVPL IE+GP+D+ N VRRD G KI + + +L + A+++ + I + V + E V+A L + +IL P+ + EE E+ + A G Sbjct: 292 EEIVMDKIKELNNTLKSEFRVHLDDRD-IRPGRKYNDWELKGVPLRIELGPRDIENGHALIVRRDTGEKITVEYSNILEEVEKIVSMYKENLKLKAEEKVKSFITVLDFENDVNSLSEKVKAKLLENKGIILIPFNESIYNEEFEELIDASVLG 444 HSP 2 Score: 37.7354 bits (86), Expect = 1.070e-14 Identity = 14/30 (46.67%), Postives = 24/30 (80.00%), Query Frame = 1 Query: 4 MVMVHGDDKGLMLPPKVASVQVIDIPVPYK 93 ++ VHGD+KGL++P VA +Q++ IP+ +K Sbjct: 260 LISVHGDEKGLVIPVDVAPIQIVLIPLLFK 289
BLAST of CX288634 vs. ExPASy Swiss-Prot
Match: SYP_THEAC (Prolyl-tRNA synthetase OS=Thermoplasma acidophilum GN=proS PE=3 SV=1) HSP 1 Score: 55.0694 bits (131), Expect = 1.070e-14 Identity = 34/125 (27.20%), Postives = 57/125 (45.60%), Query Frame = 2 Query: 161 IRANSDFIDNYSPGWKYSHWEMKGVPLMIEIGPKDLANDQVRAVRRDNGAKIDLPMGSXXXXXXXXXXXXXXSLFV-AAKQRRDACIQIVKTWDEFVEALGQRKMILAPWCDEEEVEKDVKARTK 532 IR D +NY+PG+K++ WEM+GVPL IEIG +++ N + R+ K+ + + A K +D + K +E + +I A WC +E ++A T+ Sbjct: 311 IRVKVDDRENYTPGYKFNDWEMRGVPLRIEIGEREVKNRTLTISMRNIQGKLTIERSKLIYEVPDTLIRIREKMMENAQKVFKDHVFRATK-----LEEFNRDGLITAFWCGSKECSDKIEAETE 430 HSP 2 Score: 44.669 bits (104), Expect = 1.070e-14 Identity = 18/28 (64.29%), Postives = 24/28 (85.71%), Query Frame = 1 Query: 4 MVMVHGDDKGLMLPPKVASVQVIDIPVP 87 ++ +HGDDKGL+LPP VA +QVI IP+P Sbjct: 264 IIGIHGDDKGLVLPPDVAPIQVIIIPIP 291
BLAST of CX288634 vs. ExPASy Swiss-Prot
Match: SYP_PICTO (Prolyl-tRNA synthetase OS=Picrophilus torridus GN=proS PE=3 SV=1) HSP 1 Score: 60.4622 bits (145), Expect = 1.390e-14 Identity = 28/72 (38.89%), Postives = 47/72 (65.28%), Query Frame = 2 Query: 107 KEFLMHALQLLKN*CEAGIRANSDFIDNYSPGWKYSHWEMKGVPLMIEIGPKDLANDQVRAVRRDNGAKIDL 322 KE L ++ ++L + +RA D +NY+PG+KY+ WEM+GVPL IEIG +++ + V V R N ++++ Sbjct: 296 KEVLDYSGKILSMLKDINVRAEIDSRENYTPGYKYNDWEMRGVPLRIEIGSREMESSTVTVVSRLNKKRLNI 367 HSP 2 Score: 38.891 bits (89), Expect = 1.390e-14 Identity = 16/30 (53.33%), Postives = 22/30 (73.33%), Query Frame = 1 Query: 4 MVMVHGDDKGLMLPPKVASVQVIDIPVPYK 93 ++ +HGDD GL+LP +A VQ I IP+P K Sbjct: 264 VIGIHGDDTGLILPASIAPVQAIIIPIPGK 293
BLAST of CX288634 vs. ExPASy Swiss-Prot
Match: SYP_NANEQ (Prolyl-tRNA synthetase OS=Nanoarchaeum equitans GN=proS PE=3 SV=1) HSP 1 Score: 65.0846 bits (157), Expect = 2.338e-14 Identity = 40/126 (31.75%), Postives = 62/126 (49.21%), Query Frame = 2 Query: 164 RANSDFIDNYSPGWKYSHWEMKGVPLMIEIGPKDLANDQVRAVRRDNGAKIDLPMGSXXXXXXXXXXXXXXSLFVAAKQRRDACIQIVKTWDEFVEALGQRKMILAPWCDEEEVEKDVKARTKGEM 541 R D D +PG+KY ++++ GVPL I+IG K++ N+ + VRRDN K + + + L AK + + VKT+DE EA+ Q K+ AP+C E +K E+ Sbjct: 381 RVYLDSDDTKTPGYKYYYYDLIGVPLRIDIGLKEVENNSITIVRRDNKKKYTISL-NELEKIDQIFKEMEEDLKQKAKSFVNDMVVRVKTFDELKEAIEQNKIAKAPFCMRESCANQIKELLHAEV 505 HSP 2 Score: 33.4982 bits (75), Expect = 2.338e-14 Identity = 16/32 (50.00%), Postives = 24/32 (75.00%), Query Frame = 1 Query: 19 GDDKGLMLPPKVASVQVIDIPVPYKDADTQGI 114 GDD GL++P K+A +Q++ IP+ KD DT+ I Sbjct: 336 GDDLGLVMPYKIAPIQIVIIPILGKD-DTKVI 366
BLAST of CX288634 vs. ExPASy Swiss-Prot
Match: SYP_METS3 (Prolyl-tRNA synthetase OS=Methanobrevibacter smithii (strain PS / ATCC 35061 / DSM 861) GN=proS PE=3 SV=1) HSP 1 Score: 62.3882 bits (150), Expect = 2.346e-14 Identity = 40/142 (28.17%), Postives = 69/142 (48.59%), Query Frame = 2 Query: 107 KEFLMHALQLLKN*CEAGIRANSDFIDNYSPGWKYSHWEMKGVPLMIEIGPKDLANDQVRAVRRDNGAKIDLPMG-SXXXXXXXXXXXXXXSLFVAAKQRRDACIQIVKTWDEFVEALGQRKMILAPWCDEEEVEKDVKART 529 +E L +L K AG+R N D D PG K+ WE+KG P+ +E+GP+DL N++ A+RRD KI+L + + +L +AK+ I+ DE + + + ++ WC + + + ++ T Sbjct: 294 EEVLAKCEELKKEFEAAGLRVNIDNRD-IRPGKKFYDWELKGTPIKLELGPRDLENNKTIAMRRDQLEKIELDLDENLVSNVIRLIDELNENLAESAKEFHTDHIKFASDIDEVRKLIEEGNVVAVNWCGDTDCGEKIEEIT 434 HSP 2 Score: 36.1946 bits (82), Expect = 2.346e-14 Identity = 13/27 (48.15%), Postives = 21/27 (77.78%), Query Frame = 1 Query: 13 VHGDDKGLMLPPKVASVQVIDIPVPYK 93 +HGD+KGL LPP+++ Q+ IP+ +K Sbjct: 264 IHGDEKGLRLPPEISPKQITIIPILFK 290
BLAST of CX288634 vs. ExPASy Swiss-Prot
Match: SYP_MYXXD (Prolyl-tRNA synthetase OS=Myxococcus xanthus (strain DK 1622) GN=proS PE=3 SV=1) HSP 1 Score: 59.3066 bits (142), Expect = 3.046e-14 Identity = 42/126 (33.33%), Postives = 59/126 (46.83%), Query Frame = 2 Query: 152 EAGIRANSDFIDNYSPGWKYSHWEMKGVPLMIEIGPKDLANDQVRAVRRDNGAKIDLPMGSXXXXXXXXXXXXXXSLFVAAKQRRDACIQIVKTWDEFVEALGQRKMILAPWCDEEEVEKDVKART 529 +AG+ D D SPG+KY+ E+ G L IE+GPKDLA + VRRD K + + LF AK RD+ V +++E E Q +LA W + +VE +K T Sbjct: 324 KAGLGVVLDDDDTKSPGFKYNEHELIGTCLRIELGPKDLAKNSCVMVRRDVRQKEFVSLDEAVSKAQAMLDAMQKDLFTKAKSFRDSHTFEVNSYEELKEKADQ-GFLLAHWNLDPKVEARIKEET 448 HSP 2 Score: 38.891 bits (89), Expect = 3.046e-14 Identity = 15/35 (42.86%), Postives = 25/35 (71.43%), Query Frame = 1 Query: 4 MVMVHGDDKGLMLPPKVASVQVIDIPVPYKDADTQ 108 ++M H DD GL++PPK+A+ V+ IP+ K +D + Sbjct: 273 LIMTHSDDAGLIVPPKLAATHVVIIPIFGKASDAE 307 The following BLAST results are available for this feature:
BLAST of CX288634 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 136
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Sequences
The
following sequences are available for this feature:
EST sequence >CX288634 ID=CX288634; Name=CX288634; organism=Citrus clementina; type=EST; length=547bpback to top |