CX288644

Overview
NameCX288644
Unique NameCX288644
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length566
Libraries
Library NameType
IF1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX288644 vs. ExPASy Swiss-Prot
Match: M3K3_MOUSE (Mitogen-activated protein kinase kinase kinase 3 OS=Mus musculus GN=Map3k3 PE=1 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 2.252e-20
Identity = 49/106 (46.23%), Postives = 73/106 (68.87%), Query Frame = 3
Query:    6 GTRVKSCRGTAFWMAPEVINNKNKGYGLPADIWSLGCTVLEMLTSQIPYAPMECMAALFKIG-RGSPPPIPDSLSKDAQDFIKQCVQVNPNDRPTAAQLLDHPFVK 320
            GT ++S  GT +WM+PEVI+ +  GYG  AD+WSLGCTV+EMLT + P+A  E MAA+FKI  + + P +P  +S+  +DF+++ + V    RP+A +LL H F +
Sbjct:  521 GTGIRSVTGTPYWMSPEVISGE--GYGRKADVWSLGCTVVEMLTEKPPWAEYEAMAAIFKIATQPTNPQLPSHISEHGRDFLRR-IFVEARQRPSAEELLTHHFAQ 623          
BLAST of CX288644 vs. ExPASy Swiss-Prot
Match: M3K3_HUMAN (Mitogen-activated protein kinase kinase kinase 3 OS=Homo sapiens GN=MAP3K3 PE=1 SV=2)

HSP 1 Score: 97.8265 bits (242), Expect = 3.841e-20
Identity = 49/106 (46.23%), Postives = 73/106 (68.87%), Query Frame = 3
Query:    6 GTRVKSCRGTAFWMAPEVINNKNKGYGLPADIWSLGCTVLEMLTSQIPYAPMECMAALFKIG-RGSPPPIPDSLSKDAQDFIKQCVQVNPNDRPTAAQLLDHPFVK 320
            GT ++S  GT +WM+PEVI+ +  GYG  AD+WSLGCTV+EMLT + P+A  E MAA+FKI  + + P +P  +S+  +DF+++ + V    RP+A +LL H F +
Sbjct:  521 GTGMRSVTGTPYWMSPEVISGE--GYGRKADVWSLGCTVVEMLTEKPPWAEYEAMAAIFKIATQPTNPQLPSHISEHGRDFLRR-IFVEARQRPSAEELLTHHFAQ 623          
BLAST of CX288644 vs. ExPASy Swiss-Prot
Match: Y8901_DICDI (Probable serine/threonine-protein kinase DDB_G0278901 OS=Dictyostelium discoideum GN=DDB_G0278901 PE=3 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 1.906e-19
Identity = 50/123 (40.65%), Postives = 74/123 (60.16%), Query Frame = 3
Query:   30 GTAFWMAPEVINNKNKGYGLPADIWSLGCTVLEMLTSQIPYAPMECMAALFKIGRGSPPPIPDSLSKDAQDFIKQCVQVNPNDRPTAAQLLDHPFVKRLLATNSGSASPYLGRR*GTYQLLNY 398
            GT +WMAPEVI  + +G     D+WSLGCT++E+LT   PY  +   AAL+KI +   PPIP  +S   +DF+  C + + N R +A QLL HP+VK +   N  + +P   R+    ++L+Y
Sbjct:  186 GTPYWMAPEVI--QMQGISTACDVWSLGCTIIELLTGTPPYFGLAPAAALYKIVQEDHPPIPPGISAALKDFLLNCFKKDENIRSSAKQLLHHPWVKSVQIRNPETQAPKNARQ----EILSY 302          
BLAST of CX288644 vs. ExPASy Swiss-Prot
Match: STK3_HUMAN (Serine/threonine-protein kinase 3 OS=Homo sapiens GN=STK3 PE=1 SV=2)

HSP 1 Score: 95.5153 bits (236), Expect = 1.906e-19
Identity = 50/99 (50.51%), Postives = 60/99 (60.61%), Query Frame = 3
Query:   30 GTAFWMAPEVINNKNKGYGLPADIWSLGCTVLEMLTSQIPYAPMECMAALFKIGRGSPPPI--PDSLSKDAQDFIKQCVQVNPNDRPTAAQLLDHPFVK 320
            GT FWMAPEVI  +  GY   ADIWSLG T +EM   + PYA +  M A+F I    PP    P+  S D  DF+K+C+  NP  R TA QLL HPF+K
Sbjct:  183 GTPFWMAPEVI--QEIGYNCVADIWSLGITSIEMAEGKPPYADIHPMRAIFMIPTNPPPTFRKPELWSDDFTDFVKKCLVKNPEQRATATQLLQHPFIK 279          
BLAST of CX288644 vs. ExPASy Swiss-Prot
Match: SID1_SCHPO (Serine/threonine-protein kinase sid1 OS=Schizosaccharomyces pombe GN=sid1 PE=1 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 1.906e-19
Identity = 47/97 (48.45%), Postives = 60/97 (61.86%), Query Frame = 3
Query:   30 GTAFWMAPEVINNKNKGYGLPADIWSLGCTVLEMLTSQIPYAPMECMAALFKIGRGSPPPIPDSLSKDAQDFIKQCVQVNPNDRPTAAQLLDHPFVK 320
            GT FWMAPEVI   +  YGL ADIWSLG T +EM     P A M  M  +F+I +  PP + D  S   +DF+  C+ +NPN R +A +LL HPF+K
Sbjct:  167 GTPFWMAPEVIQQTS--YGLAADIWSLGITAIEMANGIPPRATMHPMRVIFEIPQSEPPKLDDHFSPTFRDFVSCCLDLNPNMRWSAKELLQHPFIK 261          
BLAST of CX288644 vs. ExPASy Swiss-Prot
Match: MKKA_DICDI (Mitogen-activated protein kinase kinase kinase A OS=Dictyostelium discoideum GN=mkkA PE=1 SV=2)

HSP 1 Score: 95.5153 bits (236), Expect = 1.906e-19
Identity = 49/108 (45.37%), Postives = 71/108 (65.74%), Query Frame = 3
Query:    9 TRVKSCRGTAFWMAPEVINNKNKGYGLPADIWSLGCTVLEMLTSQIPYAPM-ECMAALFKIGRG-SPPPIPDSLSKDAQDFIKQCVQVNPNDRPTAAQLLDHPFVKRL 326
            ++ KS +GT +WMAPEVI  K  G+G  +DIWSLGC ++EM T+Q P++ + E  A ++ I    S P IP  +S++A DF+  C + +P +RP A QLL HPF+  L
Sbjct:  327 SQFKSMQGTPYWMAPEVI--KQTGHGRSSDIWSLGCVIVEMATAQPPWSNITELAAVMYHIASSNSIPNIPSHMSQEAFDFLNLCFKRDPKERPDANQLLKHPFIMNL 432          
BLAST of CX288644 vs. ExPASy Swiss-Prot
Match: BYR2_SCHPO (Protein kinase byr2 OS=Schizosaccharomyces pombe GN=byr2 PE=1 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 1.906e-19
Identity = 47/99 (47.47%), Postives = 66/99 (66.67%), Query Frame = 3
Query:   21 SCRGTAFWMAPEVINNKNKGYGLPADIWSLGCTVLEMLTSQIPYAPMECMAALFKIGRGSPPPIPDSLSKDAQDFIKQCVQVNPNDRPTAAQLLDHPFV 317
            S +G++FWMAPEV+  K   +    DIWSLGC V+EMLTS+ PY   + M A+F+IG    P  P ++S  A DF+++   ++ N RPTA++LL HPFV
Sbjct:  562 SFQGSSFWMAPEVV--KQTMHTEKTDIWSLGCLVIEMLTSKHPYPNCDQMQAIFRIGENILPEFPSNISSSAIDFLEKTFAIDCNLRPTASELLSHPFV 658          
BLAST of CX288644 vs. ExPASy Swiss-Prot
Match: M3K3_ARATH (Mitogen-activated protein kinase kinase kinase 3 OS=Arabidopsis thaliana GN=ANP3 PE=1 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 2.490e-19
Identity = 49/102 (48.04%), Postives = 68/102 (66.67%), Query Frame = 3
Query:   18 KSCRGTAFWMAPEVINNKNKGYGLPADIWSLGCTVLEMLTSQIPYAPM-ECMAALFKIGRGSP-PPIPDSLSKDAQDFIKQCVQVNPNDRPTAAQLLDHPFV 317
            KS +GT +WMAPEVI     G+   ADIWS+GCTV+EM T + P++   +  AA+  IGR    PPIP+ LS +A+DF+ +C+   P+ R +A +LL HPFV
Sbjct:  231 KSMKGTPYWMAPEVI--LQTGHSFSADIWSVGCTVIEMATGKPPWSEQYQQFAAVLHIGRTKAHPPIPEDLSPEAKDFLMKCLHKEPSLRLSATELLQHPFV 330          
BLAST of CX288644 vs. ExPASy Swiss-Prot
Match: STK4_MOUSE (Serine/threonine-protein kinase 4 OS=Mus musculus GN=Stk4 PE=1 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 3.252e-19
Identity = 50/99 (50.51%), Postives = 60/99 (60.61%), Query Frame = 3
Query:   30 GTAFWMAPEVINNKNKGYGLPADIWSLGCTVLEMLTSQIPYAPMECMAALFKIGRGSPPPI--PDSLSKDAQDFIKQCVQVNPNDRPTAAQLLDHPFVK 320
            GT FWMAPEVI  +  GY   ADIWSLG T +EM   + PYA +  M A+F I    PP    P+  S +  DF+KQC+  +P  R TA QLL HPFVK
Sbjct:  186 GTPFWMAPEVI--QEIGYNCVADIWSLGITAIEMAEGKPPYADIHPMRAIFMIPTNPPPTFRKPELWSDNFMDFVKQCLVKSPEQRATATQLLQHPFVK 282          
BLAST of CX288644 vs. ExPASy Swiss-Prot
Match: M3K15_MOUSE (Mitogen-activated protein kinase kinase kinase 15 OS=Mus musculus GN=Map3k15 PE=3 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 3.252e-19
Identity = 48/101 (47.52%), Postives = 69/101 (68.32%), Query Frame = 3
Query:   30 GTAFWMAPEVINNKNKGYGLPADIWSLGCTVLEMLTSQIPYAPM-ECMAALFKIGRGS-PPPIPDSLSKDAQDFIKQCVQVNPNDRPTAAQLLDHPFVKRL 326
            GT  +MAPE+I+   +GYG PADIWSLGCT++EM TS+ P+  + E  AA+FK+G     P IP++LS +A+ FI  C + +P  R TAA LL   F++++
Sbjct:  815 GTLQYMAPEIIDQGPRGYGAPADIWSLGCTIIEMATSRPPFHELGEPQAAMFKVGMFKIHPEIPEALSAEARAFILSCFEPDPQKRVTAADLLQEGFLRQV 915          
The following BLAST results are available for this feature:
BLAST of CX288644 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 198
Match NameE-valueIdentityDescription
M3K3_MOUSE2.252e-2046.23Mitogen-activated protein kinase kinase kinase 3 O... [more]
M3K3_HUMAN3.841e-2046.23Mitogen-activated protein kinase kinase kinase 3 O... [more]
Y8901_DICDI1.906e-1940.65Probable serine/threonine-protein kinase DDB_G0278... [more]
STK3_HUMAN1.906e-1950.51Serine/threonine-protein kinase 3 OS=Homo sapiens ... [more]
SID1_SCHPO1.906e-1948.45Serine/threonine-protein kinase sid1 OS=Schizosacc... [more]
MKKA_DICDI1.906e-1945.37Mitogen-activated protein kinase kinase kinase A O... [more]
BYR2_SCHPO1.906e-1947.47Protein kinase byr2 OS=Schizosaccharomyces pombe G... [more]
M3K3_ARATH2.490e-1948.04Mitogen-activated protein kinase kinase kinase 3 O... [more]
STK4_MOUSE3.252e-1950.51Serine/threonine-protein kinase 4 OS=Mus musculus ... [more]
M3K15_MOUSE3.252e-1947.52Mitogen-activated protein kinase kinase kinase 15 ... [more]

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Properties
Property NameValue
Genbank descriptionC02002G04SK IF1 Citrus clementina cDNA clone C02002G04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX288644 ID=CX288644; Name=CX288644; organism=Citrus clementina; type=EST; length=566bp
AATTCGGCACGAGGGTAAAATCTTGCAGAGGGACTGCATTCTGGATGGCC
CCAGAGGTTATTAATAATAAGAACAAAGGTTATGGGCTTCCAGCTGATAT
ATGGAGCCTTGGCTGCACTGTGTTGGAGATGTTAACCAGTCAAATTCCGT
ATGCTCCTATGGAATGTATGGCGGCATTGTTCAAGATTGGAAGGGGTTCG
CCACCACCTATTCCTGATAGTCTCTCAAAAGATGCTCAGGATTTTATCAA
GCAATGTGTACAAGTTAATCCAAATGATCGTCCCACTGCAGCTCAGCTCT
TAGACCACCCATTTGTTAAGAGACTACTTGCCACAAACTCAGGCTCAGCA
TCTCCTTATCTAGGTAGACGGTGAGGTACATATCAATTGTTAAATTACAT
TTCAGTACTTTTCCTGTTGCTGTGCTCTCCTTAACACTGGAAAGAAGAGC
TAAAACTGTGGGCGTGAATGCTTCTATTTAATACAATTAGCCTCTCTGTG
CTCCATCAGTCTCCACAGTGAGTCACACGAATTCTTCTACCATGCTTTAA
TTTTATGTTCAATGCA
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