CX288647

Overview
NameCX288647
Unique NameCX288647
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length559
Libraries
Library NameType
IF1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX288647 vs. ExPASy Swiss-Prot
Match: PER1_ARAHY (Cationic peroxidase 1 OS=Arachis hypogaea GN=PNC1 PE=1 SV=2)

HSP 1 Score: 192.586 bits (488), Expect = 1.116e-48
Identity = 101/172 (58.72%), Postives = 119/172 (69.19%), Query Frame = 2
Query:    8 AFSSDIRIGASLIRLHFHDCFVDGCDASILLDSTNTIDSEKFAAPNNNSARGFEVIDNMKAAVERACPRVVSCADILTIAAERSVALSGGPSWAVPLGRRDSRTANRALANQNLPGPFDTLDELKSSFRNVGLNDKLDLVALSGAHTFGRAQCQFFRGRLYDFNNTGKPDPT 523
            A + + R+GASL+RLHFHDCFV GCDAS+LLD T+    EK A PN NS RGFEVID +K+ VE  CP VVSCADIL +AA  SV   GG SW V LGRRDS TA+ + AN +LP PF  L  L S+F N G   K +LV LSGAHT G+AQC  FR R+Y+ +N    DPT
Sbjct:   47 AVAKEARMGASLLRLHFHDCFVQGCDASVLLDDTSNFTGEKTAGPNANSIRGFEVIDTIKSQVESLCPGVVSCADILAVAARDSVVALGGASWNVLLGRRDSTTASLSSANSDLPAPFFNLSGLISAFSNKGFTTK-ELVTLSGAHTIGQAQCTAFRTRIYNESNI---DPT 214          
BLAST of CX288647 vs. ExPASy Swiss-Prot
Match: PER5_ARATH (Peroxidase 5 OS=Arabidopsis thaliana GN=PER5 PE=2 SV=2)

HSP 1 Score: 189.504 bits (480), Expect = 9.451e-48
Identity = 97/165 (58.79%), Postives = 119/165 (72.12%), Query Frame = 2
Query:    2 KKAFSSDIRIGASLIRLHFHDCFVDGCDASILLDSTNTIDSEKFAAPNNNSARGFEVIDNMKAAVERACPRVVSCADILTIAAERSVALSGGPSWAVPLGRRDSRTANRALANQ-NLPGPFDTLDELKSSFRNVGLNDKLDLVALSGAHTFGRAQCQFFRGRLYD 493
            + A + + R+ ASLIR+HFHDCFV GCDASILL+ T+TI+SE+ A PN  S RGFEVID  K+ VE+ CP +VSCADI+ +AA  +    GGP WAV +GRRDS  A +ALAN   LPG  DTLD+L   F   GLN + DLVALSGAHT G++QC  FR RLY+
Sbjct:   47 RTAIARERRMAASLIRMHFHDCFVHGCDASILLEGTSTIESERDALPNFKSVRGFEVIDKAKSEVEKVCPGIVSCADIIAVAARDASEYVGGPKWAVKVGRRDSTAAFKALANSGELPGFKDTLDQLSGLFSKKGLNTR-DLVALSGAHTIGQSQCFLFRDRLYE 210          
BLAST of CX288647 vs. ExPASy Swiss-Prot
Match: PER4_VITVI (Peroxidase 4 OS=Vitis vinifera GN=GSVIVT00023967001 PE=1 SV=1)

HSP 1 Score: 189.504 bits (480), Expect = 9.451e-48
Identity = 94/167 (56.29%), Postives = 120/167 (71.86%), Query Frame = 2
Query:    2 KKAFSSDIRIGASLIRLHFHDCFVDGCDASILLDSTNTIDSEKFAAPNNNSARGFEVIDNMKAAVERACPRVVSCADILTIAAERSVALSGGPSWAVPLGRRDSRTANRALANQNLPGPFDTLDELKSSFRNVGLNDKLDLVALSGAHTFGRAQCQFFRGRLYDFNN 502
            + A S + R+GASL+RL FHDCFV+GCDAS+LLD T++   E+ A PN NS RG  VIDN+K+ VE  CP VVSCADI+ IAA  SV + GGP W V LGRRDS+TA+ + AN N+P P  +L  L S F+  GL+ + D+VALSGAHT G+A+C  FR R+Y+  N
Sbjct:   48 QSAVSKERRMGASLLRLFFHDCFVNGCDASVLLDDTSSFTGEQTAVPNKNSIRGLNVIDNIKSQVESVCPGVVSCADIIAIAARDSVVILGGPDWDVKLGRRDSKTASLSGANNNIPPPTSSLSNLISKFQAQGLSTR-DMVALSGAHTIGQARCTSFRARIYNETN 213          
BLAST of CX288647 vs. ExPASy Swiss-Prot
Match: PER67_ARATH (Peroxidase 67 OS=Arabidopsis thaliana GN=PER67 PE=2 SV=1)

HSP 1 Score: 189.119 bits (479), Expect = 1.234e-47
Identity = 97/168 (57.74%), Postives = 120/168 (71.43%), Query Frame = 2
Query:    2 KKAFSSDIRIGASLIRLHFHDCFVDGCDASILLDSTNTIDSEKFAAPNNNSARGFEVIDNMKAAVERACPRVVSCADILTIAAERSVALSGGPSWAVPLGRRDSRTANRALANQN-LPGPFDTLDELKSSFRNVGLNDKLDLVALSGAHTFGRAQCQFFRGRLYDFNN 502
            K+A + + R+GASL+RL FHDCFV+GCD S+LLD T +   EK + P+NNS RGFEVID +K  VE+ CP +VSCADIL I A  SV L GGP W+V LGRRDS TAN A AN   +P P  TL  L + F+  GL+ + D+VALSGAHT GRAQC  FR R+Y+ +N
Sbjct:   42 KRAVAREPRMGASLLRLFFHDCFVNGCDGSLLLDDTPSFLGEKTSGPSNNSVRGFEVIDKIKFKVEKMCPGIVSCADILAITARDSVLLLGGPGWSVKLGRRDSTTANFAAANSGVIPPPITTLSNLINRFKAQGLSTR-DMVALSGAHTIGRAQCVTFRNRIYNASN 208          
BLAST of CX288647 vs. ExPASy Swiss-Prot
Match: PER40_ARATH (Peroxidase 40 OS=Arabidopsis thaliana GN=PER40 PE=2 SV=2)

HSP 1 Score: 187.963 bits (476), Expect = 2.750e-47
Identity = 98/181 (54.14%), Postives = 126/181 (69.61%), Query Frame = 2
Query:   20 DIRIGASLIRLHFHDCFVDGCDASILLDSTNTIDSEKFAAPNNNSARGFEVIDNMKAAVERACPRVVSCADILTIAAERSVALSGGPSWAVPLGRRDSRTANRALANQNLPGPFDTLDELKSSFRNVGLNDKLDLVALSGAHTFGRAQCQFFRGRLYDFNNTGKPDPTLD-ATFLQQLRKL 559
            D R+ ASL+RLHFHDCFV+GCDAS+LLD T  +  EK A PN NS RGFEVID++K+ +E  CP  VSCADIL +AA  SV +SGGP W V +GR+DSRTA++  A   LP P  T+  L S+F+N+GL+ + D+VALSG HT G+A+C  F  RL     TG+P    D   FL+ L++L
Sbjct:   77 DPRMAASLLRLHFHDCFVNGCDASVLLDDTEGLVGEKTAPPNLNSLRGFEVIDSIKSDIESVCPETVSCADILAMAARDSVVVSGGPRWEVEVGRKDSRTASKQAATNGLPSPNSTVSTLISTFQNLGLS-QTDMVALSGGHTLGKARCTSFTARLQPL-QTGQPANHGDNLEFLESLQQL 255          
BLAST of CX288647 vs. ExPASy Swiss-Prot
Match: PER36_ARATH (Peroxidase 36 OS=Arabidopsis thaliana GN=PER36 PE=2 SV=2)

HSP 1 Score: 187.963 bits (476), Expect = 2.750e-47
Identity = 92/183 (50.27%), Postives = 126/183 (68.85%), Query Frame = 2
Query:    8 AFSSDIRIGASLIRLHFHDCFVDGCDASILLDSTNTIDSEKFAAPNNNSARGFEVIDNMKAAVERACPRVVSCADILTIAAERSVALSGGPSWAVPLGRRDSRTANRALANQNLPGPFDTLDELKSSFRNVGLNDKLDLVALSGAHTFGRAQCQFFRGRLYDFNNTGKPDPTLDATFLQQLRK 556
            A+ +D R+ AS++RLHFHDCFV+GCDAS+LLDS+ T++SEK +  N +SARGFEVID +K+A+E  CP  VSCAD+L + A  S+ + GGPSW V LGRRD+R A+   + +N+P P  TL  + + F   GL D  DLVAL G+HT G ++C  FR RLY+      PD TL+  +   L++
Sbjct:   64 AYFNDPRMAASILRLHFHDCFVNGCDASVLLDSSGTMESEKRSNANRDSARGFEVIDEIKSALENECPETVSCADLLALVARDSIVICGGPSWEVYLGRRDAREASLIGSMENIPSPESTLQTILTMFNFQGL-DLTDLVALLGSHTIGNSRCIGFRQRLYNHTGNNDPDQTLNQDYASMLQQ 245          
BLAST of CX288647 vs. ExPASy Swiss-Prot
Match: PER58_ARATH (Peroxidase 58 OS=Arabidopsis thaliana GN=PER58 PE=2 SV=1)

HSP 1 Score: 186.422 bits (472), Expect = 8.001e-47
Identity = 104/188 (55.32%), Postives = 133/188 (70.74%), Query Frame = 2
Query:    2 KKAFSSDIRIGASLIRLHFHDCFVDGCDASILLDST--NTIDSEKFAAPNNNSARGFEVIDNMKAAVERACPRVVSCADILTIAAERSVALSGGPSWAVPLGRRDSRTANRALANQNLPGPFDTLDELKSSFRNVGLNDKLDLVALSGAHTFGRAQCQFFRGRLYDFN-NTGKPDPTLDATFLQQLRK 556
            ++A  +D+R+ A ++RLHFHDCFV+GCD S+LLD+   + ++ EK A  N  S  GFEVID++K A+E  CP VVSCADIL IAAE SVAL+GGPS  V LGRRD RTA RA A   LP   D+L+ L S F +V   D  DLVALSGAHTFGR QC     RL++F+ N+G+ DP+++  FLQ LR+
Sbjct:   46 ERASRNDVRLTAKVMRLHFHDCFVNGCDGSVLLDAAPADGVEGEKEAFQNAGSLDGFEVIDDIKTALENVCPGVVSCADILAIAAEISVALAGGPSLDVLLGRRDGRTAIRADAVAALPLGPDSLEILTSKF-SVHNLDTTDLVALSGAHTFGRVQCGVINNRLHNFSGNSGQSDPSIEPEFLQTLRR 232          
BLAST of CX288647 vs. ExPASy Swiss-Prot
Match: PER70_MAIZE (Peroxidase 70 OS=Zea mays GN=PER70 PE=1 SV=1)

HSP 1 Score: 184.496 bits (467), Expect = 3.040e-46
Identity = 97/173 (56.07%), Postives = 116/173 (67.05%), Query Frame = 2
Query:    8 AFSSDIRIGASLIRLHFHDCFVDGCDASILLDSTNTIDSEKFAAPNNNSARGFEVIDNMKAAVERACPRVVSCADILTIAAERSVALSGGPSWAVPLGRRDSRTANRALANQNLPGPFDTLDELKSSFRNVGLNDKLDLVALSGAHTFGRAQCQFFRGRLYDFNNTGKPDPTL 526
            A + + R+GASL+RLHFHDCFV GCD S+LL+ T T   E+ A PN  S RGF V+DN+KA VE  CP VVSCADIL +AA  SV   GGPSW V LGRRDS TA+ ALAN +LP P   L  L ++F    L+ + DLVALSGAHT G AQC+ FR  +Y+  N      TL
Sbjct:   50 AVAQEARMGASLLRLHFHDCFVQGCDGSVLLNDTATFTGEQTANPNVGSIRGFGVVDNIKAQVEAVCPGVVSCADILAVAARDSVVALGGPSWRVLLGRRDSTTASLALANSDLPAPSLDLANLTAAFAKKRLS-RTDLVALSGAHTIGLAQCKNFRAHIYNDTNVNAAFATL 221          
BLAST of CX288647 vs. ExPASy Swiss-Prot
Match: PER68_ARATH (Peroxidase 68 OS=Arabidopsis thaliana GN=PER68 PE=2 SV=1)

HSP 1 Score: 184.496 bits (467), Expect = 3.040e-46
Identity = 98/168 (58.33%), Postives = 119/168 (70.83%), Query Frame = 2
Query:    2 KKAFSSDIRIGASLIRLHFHDCFVDGCDASILLDSTNTIDSEKFAAPNNNSARGFEVIDNMKAAVERACPRVVSCADILTIAAERSVALSGGPSWAVPLGRRDSRTANRALANQN-LPGPFDTLDELKSSFRNVGLNDKLDLVALSGAHTFGRAQCQFFRGRLYDFNN 502
            ++  + + RI ASL+RL FHDCFV+GCDASILLD T +   EK A PNNNS RG+EVID +K+ VER CP VVSCADIL I A  SV L GG  W+V LGRRDS TA+ + AN   LP P  TLD L + FR  GL+ + D+VALSGAHT G+A+C  FR R+Y+  N
Sbjct:   51 QREVAKERRIAASLLRLFFHDCFVNGCDASILLDDTRSFLGEKTAGPNNNSVRGYEVIDAIKSRVERLCPGVVSCADILAITARDSVLLMGGRGWSVKLGRRDSITASFSTANSGVLPPPTSTLDNLINLFRANGLSPR-DMVALSGAHTIGQARCVTFRSRIYNSTN 217          
BLAST of CX288647 vs. ExPASy Swiss-Prot
Match: PER2_ORYSJ (Peroxidase 2 OS=Oryza sativa subsp. japonica GN=PRX112 PE=2 SV=1)

HSP 1 Score: 183.341 bits (464), Expect = 6.773e-46
Identity = 99/182 (54.40%), Postives = 120/182 (65.93%), Query Frame = 2
Query:    8 AFSSDIRIGASLIRLHFHDCFVDGCDASILLDSTNTIDSEKFAAPNNNSARGFEVIDNMKAAVERACPRVVSCADILTIAAERSVALSGGPSWAVPLGRRDSRTANRALANQNLPGPFDTLDELKSSFRNVGLNDKLDLVALSGAHTFGRAQCQFFRGRLYDFNNTGKPDPTLDATFLQQLR 553
            A +S+ R+GASL+RLHFHDCFV GCDAS+LL        E+ A PN  S RGF V+DN+K  VE  C + VSCADIL +AA  SV   GGPSW V LGRRDS TAN + AN +LP P  +L EL  +F   GL D  D+VALSGAHT G+AQCQ FR RLY+  N       +D++F   L+
Sbjct:   48 AVNSEPRMGASLVRLHFHDCFVQGCDASVLLSG-----QEQNAGPNAGSLRGFNVVDNIKTQVEAICSQTVSCADILAVAARDSVVALGGPSWTVLLGRRDSTTANESQANTDLPAPSSSLAELIGNFSRKGL-DVTDMVALSGAHTIGQAQCQNFRDRLYNETN-------IDSSFATALK 216          
The following BLAST results are available for this feature:
BLAST of CX288647 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 109
Match NameE-valueIdentityDescription
PER1_ARAHY1.116e-4858.72Cationic peroxidase 1 OS=Arachis hypogaea GN=PNC1 ... [more]
PER5_ARATH9.451e-4858.79Peroxidase 5 OS=Arabidopsis thaliana GN=PER5 PE=2 ... [more]
PER4_VITVI9.451e-4856.29Peroxidase 4 OS=Vitis vinifera GN=GSVIVT0002396700... [more]
PER67_ARATH1.234e-4757.74Peroxidase 67 OS=Arabidopsis thaliana GN=PER67 PE=... [more]
PER40_ARATH2.750e-4754.14Peroxidase 40 OS=Arabidopsis thaliana GN=PER40 PE=... [more]
PER36_ARATH2.750e-4750.27Peroxidase 36 OS=Arabidopsis thaliana GN=PER36 PE=... [more]
PER58_ARATH8.001e-4755.32Peroxidase 58 OS=Arabidopsis thaliana GN=PER58 PE=... [more]
PER70_MAIZE3.040e-4656.07Peroxidase 70 OS=Zea mays GN=PER70 PE=1 SV=1[more]
PER68_ARATH3.040e-4658.33Peroxidase 68 OS=Arabidopsis thaliana GN=PER68 PE=... [more]
PER2_ORYSJ6.773e-4654.40Peroxidase 2 OS=Oryza sativa subsp. japonica GN=PR... [more]

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Properties
Property NameValue
Genbank descriptionC02002G07SK IF1 Citrus clementina cDNA clone C02002G07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX288647 ID=CX288647; Name=CX288647; organism=Citrus clementina; type=EST; length=559bp
TAAGAAAGCTTTCTCGTCCGATATCCGGATCGGTGCCAGCCTCATCAGGC
TTCATTTCCATGACTGTTTTGTTGATGGGTGTGATGCATCGATTTTGCTG
GACAGCACTAACACCATAGACAGCGAGAAATTTGCTGCGCCAAATAACAA
TTCGGCGAGGGGTTTTGAAGTTATTGATAACATGAAAGCTGCCGTTGAAA
GGGCATGTCCAAGGGTTGTTTCCTGCGCTGATATTCTTACTATTGCGGCT
GAACGATCCGTTGCTTTGTCAGGGGGTCCGTCATGGGCAGTTCCATTGGG
AAGAAGAGACAGCAGAACGGCAAACAGAGCTCTTGCAAATCAGAATCTTC
CAGGACCATTTGATACTCTTGATGAGCTCAAATCTAGTTTTAGAAATGTT
GGCCTCAATGACAAGCTTGATCTTGTTGCACTCTCCGGAGCACACACGTT
CGGAAGGGCTCAGTGCCAATTTTTCAGGGGCAGATTATACGATTTTAACA
ACACTGGCAAGCCAGACCCAACCCTAGACGCAACCTTCTTACAACAACTG
AGGAAACTA
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