CX288647

Overview
NameCX288647
Unique NameCX288647
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length559
Libraries
Library NameType
IF1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX288647 vs. ExPASy Swiss-Prot
Match: PER48_ARATH (Putative Peroxidase 48 OS=Arabidopsis thaliana GN=PER48 PE=2 SV=3)

HSP 1 Score: 167.548 bits (423), Expect = 3.846e-41
Identity = 84/175 (48.00%), Postives = 116/175 (66.29%), Query Frame = 2
Query:   29 IGASLIRLHFHDCFVDGCDASILLDSTNTIDSEKFAAPNNNSARGFEVIDNMKAAVERACPRVVSCADILTIAAERSVALSGGPSWAVPLGRRDSRTANRALANQNLPGPFDTLDELKSSFRNVGLNDKLDLVALSGAHTFGRAQCQFFRGRLYDFNNTGKPDPTLDATFLQQLR 553
            +   +IRL FHDCF++GCDAS+LLD+     SEK A+PN  S +GF+VID +K+ +E  CP VVSCAD+L +AA  +V ++GGP + +  GR+DS  A R  A   LP P  TL  +   F   G N++ + V+L GAH+ G   C FF+ RLY+F+ TGKPDP L+  FLQ+L+
Sbjct:   98 VAPPIIRLLFHDCFIEGCDASVLLDADEAHTSEKDASPNL-SLKGFDVIDAVKSELENVCPGVVSCADLLVLAAREAVLVAGGPFYPLETGRKDSAAAYRDFAEHELPAPDATLSVILQRFSFRGFNER-ETVSLFGAHSIGITHCTFFKNRLYNFSATGKPDPELNPGFLQELK 270          
BLAST of CX288647 vs. ExPASy Swiss-Prot
Match: PER3_ARATH (Peroxidase 3 OS=Arabidopsis thaliana GN=PER3 PE=1 SV=1)

HSP 1 Score: 167.548 bits (423), Expect = 3.846e-41
Identity = 84/175 (48.00%), Postives = 116/175 (66.29%), Query Frame = 2
Query:   29 IGASLIRLHFHDCFVDGCDASILLDSTNTIDSEKFAAPNNNSARGFEVIDNMKAAVERACPRVVSCADILTIAAERSVALSGGPSWAVPLGRRDSRTANRALANQNLPGPFDTLDELKSSFRNVGLNDKLDLVALSGAHTFGRAQCQFFRGRLYDFNNTGKPDPTLDATFLQQLR 553
            + A+LIR+HFHDCFV GCD S+L++ST+  ++E+ A PN  + RGF  ID +K+ +E  CP +VSCADI+ +A+  +V  +GGP+W+VP GRRD R +N A A  N+P P   +  L++ F N GL D  DLV LSGAHT G + C  F  RLY+F   G  DP LD+ +   L+
Sbjct:   56 LAAALIRMHFHDCFVRGCDGSVLINSTSG-NAERDATPNL-TVRGFGFIDAIKSVLEAQCPGIVSCADIIALASRDAVVFTGGPNWSVPTGRRDGRISNAAEALANIPPPTSNITNLQTLFANQGL-DLKDLVLLSGAHTIGVSHCSSFTNRLYNFTGRGGQDPALDSEYAANLK 227          
BLAST of CX288647 vs. ExPASy Swiss-Prot
Match: PER43_ARATH (Peroxidase 43 OS=Arabidopsis thaliana GN=PER43 PE=2 SV=2)

HSP 1 Score: 167.162 bits (422), Expect = 5.023e-41
Identity = 89/178 (50.00%), Postives = 122/178 (68.54%), Query Frame = 2
Query:   17 SDIRIGASLIRLHFHDCFVDGCDASILLDSTNTIDSEKFAAPNNNSARGFEVIDNMKAAVERACPRVVSCADILTIAAERSVALSGGPSWAVPLGRRDSRTANRALANQNLPGPFDTLDELKSSFRNVGLNDKLDLVALSGAHTFGRAQCQFFRGRLYDFNNTGKPDPTLDATFLQQL 550
            SD  + A L+RLHFHDCFV+GCD SIL++  N   SEK A   +   RGFE+++ +KA +E ACP VVSC+DI+ +AA  +++L+ GP++ VP GRRD R +N +LA +++P   D+++ LK+ F   GLN K DLV LS AHT G   C F   RLYDF   G+PDPT++ TFL +L
Sbjct:   52 SDPNLPAILLRLHFHDCFVEGCDGSILVN--NGAISEKNAF-GHEGVRGFEIVEAVKAELEAACPGVVSCSDIVALAARDAISLANGPAYEVPTGRRDGRVSNMSLA-KDMPEVSDSIEILKAKFMQKGLNAK-DLVLLSAAHTIGTTACFFMSKRLYDFLPGGQPDPTINPTFLPEL 224          
BLAST of CX288647 vs. ExPASy Swiss-Prot
Match: PER56_ARATH (Peroxidase 56 OS=Arabidopsis thaliana GN=PER56 PE=2 SV=1)

HSP 1 Score: 163.696 bits (413), Expect = 5.553e-40
Identity = 85/183 (46.45%), Postives = 112/183 (61.20%), Query Frame = 2
Query:    5 KAFSSDIRIGASLIRLHFHDCFVDGCDASILLDSTNTIDSEKFAAPNNNSARGFEVIDNMKAAVERACPRVVSCADILTIAAERSVALSGGPSWAVPLGRRDSRTANRALANQNLPGPFDTLDELKSSFRNVGLNDKLDLVALSGAHTFGRAQCQFFRGRLYDFNNTGKPDPTLDATFLQQLR 553
            +A  +D  I A L+R+ FHDCFV GC+ S+LL+  N  D EK + PN  + RGFE+IDN+KAA+E+ CP +VSC+D+L + A  ++    GPSW V  GRRD    N   A  NLP PF+ +  L + F++ GL DK DLV LSG HT G   C     RLY+F   G  DP LD  +  +LR
Sbjct:   54 EAVKNDRTIAAPLLRMFFHDCFVRGCEGSVLLELKNKKD-EKNSIPNL-TLRGFEIIDNVKAALEKECPGIVSCSDVLALVARDAMVALNGPSWEVETGRRDGLVTNITEALLNLPSPFNNISSLITQFQSKGL-DKKDLVVLSGGHTIGNGHCPQITNRLYNFTGKGDSDPNLDTEYAVKLR 233          
BLAST of CX288647 vs. ExPASy Swiss-Prot
Match: PER2_ZINEL (Basic peroxidase OS=Zinnia elegans GN=POD3 PE=1 SV=1)

HSP 1 Score: 162.925 bits (411), Expect = 9.473e-40
Identity = 93/181 (51.38%), Postives = 120/181 (66.30%), Query Frame = 2
Query:    2 KKAFSSDIRIGASLIRLHFHDCFVDGCDASILLDSTNTIDSEKFAAPNNNSARGFEVIDNMKAAVERACPRVVSCADILTIAAERSVALSGGPSWAVPLGRRDSRTANRALANQNLPGPFDTLDELKSSFRNVGLNDKLDLVALSGAHTFGRAQCQFFRGRLYDFNNTGKPDPTLDATFLQ 544
            + + SS+ R  A +IRL FHDCFV GCDAS+LL       SE+ A+P N+   G+EVID  KAAVER CP VVSCADIL +AA  +    GGPSW V LGRRDS T+N A A  +LP     L +L S+F N GLN + ++VALSG+HT G+A+C  FRGR+Y  N+T + +P  + +  Q
Sbjct:   53 RSSVSSNRRNAALVIRLLFHDCFVQGCDASLLLSGAG---SER-ASPANDGVLGYEVIDAAKAAVERVCPGVVSCADILAVAARDASVAVGGPSWTVRLGRRDSTTSNAAQAATDLPRGNMVLSQLISNFANKGLNTR-EMVALSGSHTLGQARCIRFRGRIY--NSTLRIEPNFNRSLSQ 226          
BLAST of CX288647 vs. ExPASy Swiss-Prot
Match: PER1_ZINEL (Basic peroxidase OS=Zinnia elegans GN=POD1 PE=1 SV=1)

HSP 1 Score: 162.925 bits (411), Expect = 9.473e-40
Identity = 93/181 (51.38%), Postives = 120/181 (66.30%), Query Frame = 2
Query:    2 KKAFSSDIRIGASLIRLHFHDCFVDGCDASILLDSTNTIDSEKFAAPNNNSARGFEVIDNMKAAVERACPRVVSCADILTIAAERSVALSGGPSWAVPLGRRDSRTANRALANQNLPGPFDTLDELKSSFRNVGLNDKLDLVALSGAHTFGRAQCQFFRGRLYDFNNTGKPDPTLDATFLQ 544
            + + SS+ R  A +IRL FHDCFV GCDAS+LL       SE+ A+P N+   G+EVID  KAAVER CP VVSCADIL +AA  +    GGPSW V LGRRDS T+N A A  +LP     L +L S+F N GLN + ++VALSG+HT G+A+C  FRGR+Y  N+T + +P  + +  Q
Sbjct:   53 RSSVSSNRRNAALVIRLLFHDCFVQGCDASLLLSGAG---SER-ASPANDGVLGYEVIDAAKAAVERVCPGVVSCADILAVAARDASVAVGGPSWTVRLGRRDSTTSNAAQAATDLPRGNMVLSQLISNFANKGLNTR-EMVALSGSHTLGQARCIRFRGRIY--NSTLRIEPNFNRSLSQ 226          
BLAST of CX288647 vs. ExPASy Swiss-Prot
Match: PER66_ARATH (Peroxidase 66 OS=Arabidopsis thaliana GN=PER66 PE=2 SV=1)

HSP 1 Score: 157.918 bits (398), Expect = 3.047e-38
Identity = 86/179 (48.04%), Postives = 114/179 (63.69%), Query Frame = 2
Query:   20 DIRIGASLIRLHFHDCFVDGCDASILLDSTNTIDSEKFAAPNNNSARGFEVIDNMKAAVERACPRVVSCADILTIAAERSVALSGGPSWAVPLGRRDSRTANRALANQNLPGPFDTLDELKSSFRNVGLNDKLDLVALSGAHTFGRAQCQFFRGRLYDFNNTGKPDPTLDATFLQQLRK 556
            D ++ A L+R+ FHDCF+ GCDASILLDST +  +EK   PN  S R F VI++ K  +E+ACPR VSCAD++ IAA   V LSGGP W+V  GR+D  T +RA   +NLP P   + +L  SF   GL+ K D+V LSG HT G + C  F  RL +F+     DP+++  F Q L+K
Sbjct:   53 DPKVPARLLRMFFHDCFIRGCDASILLDSTRSNQAEKDGPPNI-SVRSFYVIEDAKRKLEKACPRTVSCADVIAIAARDVVTLSGGPYWSVLKGRKDG-TISRANETRNLPPPTFNVSQLIQSFAARGLSVK-DMVTLSGGHTIGFSHCSSFESRLQNFSKFHDIDPSMNYAFAQTLKK 228          
BLAST of CX288647 vs. ExPASy Swiss-Prot
Match: PER70_ARATH (Peroxidase 70 OS=Arabidopsis thaliana GN=PER70 PE=2 SV=1)

HSP 1 Score: 157.532 bits (397), Expect = 3.980e-38
Identity = 85/167 (50.90%), Postives = 107/167 (64.07%), Query Frame = 2
Query:   41 LIRLHFHDCFVDGCDASILLDSTNTIDSEKFAAPNNNSARGFEVIDNMKAAVERACPRVVSCADILTIAAERSVALSGGPSWAVPLGRRDSRTANRALANQNLPGPFDTLDELKSSFRNVGLNDKLDLVALSGAHTFGRAQCQFFRGRLYDFNNTGKPDPTLDATFL 541
            ++R+HFHDCFV GCDAS+LL   N   SE+ A PN  S RGF VI+  K  +E ACPR VSCADIL +AA   V L+GGP W VPLGR D R +    +N  LPGP D++   K  F    LN + DLV L+  HT G A C  FR R ++++NTG PDPT+  +F+
Sbjct:   68 ILRMHFHDCFVQGCDASVLLAGPN---SERTAIPNL-SLRGFNVIEEAKTQLEIACPRTVSCADILALAARDFVHLAGGPWWPVPLGRLDGRIS--LASNVILPGPTDSVAVQKLRFAEKNLNTQ-DLVVLAAGHTIGTAGCIVFRDRFFNYDNTGSPDPTIAPSFV 227          
BLAST of CX288647 vs. ExPASy Swiss-Prot
Match: PER42_MAIZE (Peroxidase 42 OS=Zea mays GN=PER42 PE=2 SV=1)

HSP 1 Score: 155.992 bits (393), Expect = 1.158e-37
Identity = 87/183 (47.54%), Postives = 114/183 (62.30%), Query Frame = 2
Query:    8 AFSSDIRIGASLIRLHFHDCFVDGCDASILLDSTNTIDSEKFAAPNNN-SARGFEVIDNMKAAVERACPRVVSCADILTIAAERSVALSGGPSWAVPLGRRDSRTANRALANQNLPGPFDTLDELKSSFRNVGLNDKLDLVALSGAHTFGRAQCQFFRGRLYDFNNTGKPDPTLDATFLQQLR 553
            A +   R+GASL+RLHFHDCF+ GCDASILL+ T+    E+   PN   + R F+V++++KA VE ACP VVSCADIL +AA   V   GGPSW V LGRRDS T +      +LP P  +L  L +++    L D  D+VALSGAHT G+AQC  F G +Y+       D  ++A F   L+
Sbjct:   54 AVAQQARVGASLLRLHFHDCFIQGCDASILLNDTS---GEQTQPPNLTLNPRAFDVVNSIKAQVEAACPGVVSCADILAVAARDGVVALGGPSWTVLLGRRDS-TGSFPSQTSDLPPPTSSLQALLAAYSKKNL-DATDMVALSGAHTIGQAQCSSFNGHIYN-------DTNINAAFATSLK 224          
BLAST of CX288647 vs. ExPASy Swiss-Prot
Match: PER12_ARATH (Peroxidase 12 OS=Arabidopsis thaliana GN=PER12 PE=1 SV=1)

HSP 1 Score: 155.992 bits (393), Expect = 1.158e-37
Identity = 87/187 (46.52%), Postives = 116/187 (62.03%), Query Frame = 2
Query:    2 KKAFSSDIRIGASLIRLHFHDCFVDGCDASILLDSTNTIDSEKFAAPNNN-SARGFEVIDNMKAAVERACPRVVSCADILTIAAERSVALSGGPSWAVPLGRRDSRT-ANRALANQNLPGPFDTLDELKSSFRNVGLNDKLDLVALSGAHTFGRAQCQFFRGRLYDFNNTGKPDPTLDATFLQQLRK 556
            KK F  DI + A+++R+HFHDCFV GC+AS+LL  + +   E+ + PN     + F VI+N++A V++ C +VVSC+DIL +AA  SV LSGGP +AVPLGRRDS   A++     NLP PF    +L + F N  LN   DLVALSG HT G A C  F  RLY        DPT++  F   L++
Sbjct:   65 KKVFKRDIGLAAAILRIHFHDCFVQGCEASVLLAGSASGPGEQSSIPNLTLRQQAFVVINNLRALVQKKCGQVVSCSDILALAARDSVVLSGGPDYAVPLGRRDSLAFASQETTLNNLPPPFFNASQLIADFANRNLN-ITDLVALSGGHTIGIAHCPSFTDRLYP-----NQDPTMNQFFANSLKR 245          
The following BLAST results are available for this feature:
BLAST of CX288647 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 109
Match NameE-valueIdentityDescription
PER48_ARATH3.846e-4148.00Putative Peroxidase 48 OS=Arabidopsis thaliana GN=... [more]
PER3_ARATH3.846e-4148.00Peroxidase 3 OS=Arabidopsis thaliana GN=PER3 PE=1 ... [more]
PER43_ARATH5.023e-4150.00Peroxidase 43 OS=Arabidopsis thaliana GN=PER43 PE=... [more]
PER56_ARATH5.553e-4046.45Peroxidase 56 OS=Arabidopsis thaliana GN=PER56 PE=... [more]
PER2_ZINEL9.473e-4051.38Basic peroxidase OS=Zinnia elegans GN=POD3 PE=1 SV... [more]
PER1_ZINEL9.473e-4051.38Basic peroxidase OS=Zinnia elegans GN=POD1 PE=1 SV... [more]
PER66_ARATH3.047e-3848.04Peroxidase 66 OS=Arabidopsis thaliana GN=PER66 PE=... [more]
PER70_ARATH3.980e-3850.90Peroxidase 70 OS=Arabidopsis thaliana GN=PER70 PE=... [more]
PER42_MAIZE1.158e-3747.54Peroxidase 42 OS=Zea mays GN=PER42 PE=2 SV=1[more]
PER12_ARATH1.158e-3746.52Peroxidase 12 OS=Arabidopsis thaliana GN=PER12 PE=... [more]

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Properties
Property NameValue
Genbank descriptionC02002G07SK IF1 Citrus clementina cDNA clone C02002G07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX288647 ID=CX288647; Name=CX288647; organism=Citrus clementina; type=EST; length=559bp
TAAGAAAGCTTTCTCGTCCGATATCCGGATCGGTGCCAGCCTCATCAGGC
TTCATTTCCATGACTGTTTTGTTGATGGGTGTGATGCATCGATTTTGCTG
GACAGCACTAACACCATAGACAGCGAGAAATTTGCTGCGCCAAATAACAA
TTCGGCGAGGGGTTTTGAAGTTATTGATAACATGAAAGCTGCCGTTGAAA
GGGCATGTCCAAGGGTTGTTTCCTGCGCTGATATTCTTACTATTGCGGCT
GAACGATCCGTTGCTTTGTCAGGGGGTCCGTCATGGGCAGTTCCATTGGG
AAGAAGAGACAGCAGAACGGCAAACAGAGCTCTTGCAAATCAGAATCTTC
CAGGACCATTTGATACTCTTGATGAGCTCAAATCTAGTTTTAGAAATGTT
GGCCTCAATGACAAGCTTGATCTTGTTGCACTCTCCGGAGCACACACGTT
CGGAAGGGCTCAGTGCCAATTTTTCAGGGGCAGATTATACGATTTTAACA
ACACTGGCAAGCCAGACCCAACCCTAGACGCAACCTTCTTACAACAACTG
AGGAAACTA
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