CX288647

Overview
NameCX288647
Unique NameCX288647
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length559
Libraries
Library NameType
IF1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX288647 vs. ExPASy Swiss-Prot
Match: PER66_MAIZE (Peroxidase 66 OS=Zea mays GN=PER66 PE=1 SV=1)

HSP 1 Score: 155.606 bits (392), Expect = 1.512e-37
Identity = 88/183 (48.09%), Postives = 115/183 (62.84%), Query Frame = 2
Query:    8 AFSSDIRIGASLIRLHFHDCFVDGCDASILLDSTNTIDSEKFAAPNNN-SARGFEVIDNMKAAVERACPRVVSCADILTIAAERSVALSGGPSWAVPLGRRDSRTANRALANQNLPGPFDTLDELKSSFRNVGLNDKLDLVALSGAHTFGRAQCQFFRGRLYDFNNTGKPDPTLDATFLQQLR 553
            A   + R+GASL+RLHFHDCFV GCDAS+LL+ T+    E+   PN   + RGF V++++KA VE  CP +VSCADIL +AA   V   GGPSW V LGRRDS TA+ A    +LP P  +L +L S++    LN   D+VALSGAHT G+AQC  F   +Y+       D  +++ F   LR
Sbjct:   54 AVRQEPRVGASLLRLHFHDCFVRGCDASLLLNDTS---GEQSQGPNLTLNPRGFVVVNSIKAQVESVCPGIVSCADILAVAARDGVVALGGPSWTVLLGRRDS-TASFAGQTSDLPPPTSSLGQLLSAYNKKNLN-PTDMVALSGAHTIGQAQCSSFNDHIYN-------DTNINSAFAASLR 224          
BLAST of CX288647 vs. ExPASy Swiss-Prot
Match: PER62_ARATH (Peroxidase 62 OS=Arabidopsis thaliana GN=PER62 PE=2 SV=1)

HSP 1 Score: 154.451 bits (389), Expect = 3.369e-37
Identity = 91/185 (49.19%), Postives = 114/185 (61.62%), Query Frame = 2
Query:   11 FSSDIRIGASLIRLHFHDCFVDGCDASILLDSTNTIDSEKFAAPNNNSARGFEVIDNMKAAVERACPRVVSCADILTIAAERSVALSGGPSWAVPLGRRDSRTANRALANQNLPGPFDTLDELKSSFRNVGLNDKLDLVAL-SGAHTFGRAQCQFFRGRLYDFNNTGK-PDPTLDATFLQQLRKL 559
            F SD ++   L+R+H HDCFV GCD S+LL   N   SE+ A  N N   GFEVID+ K  +E ACP VVSCADIL +AA  SV+L+ G SW VP GRRD R +  +  N NLP P D+L   +  F    LN + DLV L  G HT G A C F   R+  FN++G   DPT+D TF+ QL++L
Sbjct:   49 FGSDPKVAPGLLRMHNHDCFVQGCDGSVLLSGPN---SERTAGANVN-LHGFEVIDDAKRQLEAACPGVVSCADILALAARDSVSLTNGQSWQVPTGRRDGRVSLASNVN-NLPSPSDSLAIQQRKFSAFRLNTR-DLVTLVGGGHTIGTAACGFITNRI--FNSSGNTADPTMDQTFVPQLQRL 225          
BLAST of CX288647 vs. ExPASy Swiss-Prot
Match: PER61_ARATH (Probable peroxidase 61 OS=Arabidopsis thaliana GN=PER61 PE=2 SV=1)

HSP 1 Score: 154.066 bits (388), Expect = 4.400e-37
Identity = 84/186 (45.16%), Postives = 113/186 (60.75%), Query Frame = 2
Query:    2 KKAFSSDIRIGASLIRLHFHDCFVDGCDASILLDSTNTIDSEKFAAPNNNSARGFEVIDNMKAAVERACPRVVSCADILTIAAERSVALSGGPSWAVPLGRRDSRTANRALANQNLPGPFDTLDELKSSFRNVGLNDKLDLVALSGAHTFGRAQCQFFRGRLYDFNNTGKPDPTLDATFLQQLRKL 559
            +K + +D  I   L+RL + DC V+GCD SILL   N   SE+  AP N    GF +ID +K  +E  CP VVSCADIL +A   +V ++G PS+ V  GRRD  T N      +LP P  ++DE  + F++ GL D LD+  L GAH+ G+  C +   RLY+F NTGKPDPT++ T + QLR L
Sbjct:   58 EKFYKNDSSIAPKLLRLLYSDCMVNGCDGSILLQGPN---SER-TAPQNRGLGGFVIIDKIKQVLESRCPGVVSCADILNLATRDAVHMAGAPSYPVFTGRRDGGTLNADAV--DLPSPSISVDESLAYFKSKGL-DVLDMTTLLGAHSMGKTHCSYVVDRLYNFKNTGKPDPTMNTTLVSQLRYL 236          
BLAST of CX288647 vs. ExPASy Swiss-Prot
Match: PER1_ORYSJ (Peroxidase 1 OS=Oryza sativa subsp. japonica GN=PRX74 PE=2 SV=2)

HSP 1 Score: 153.68 bits (387), Expect = 5.747e-37
Identity = 87/188 (46.28%), Postives = 112/188 (59.57%), Query Frame = 2
Query:    5 KAFSSDIRIGASLIRLHFHDCFVDGCDASILLDSTNTIDSEKFAAPNNNSARGFEVIDNMKAAVERACPRVVSCADILTIAAERSVALSGGPSWAVPLGRRDSRTANRALANQ--NLPGPFDTLDELKSSFRNVGLNDKLDLVALSGAHTFGRAQCQFFRGRLYDF---NNTGKPDPTLDATFLQQLR 553
            +A  +   +   L+R+HFHDCFV GCD S+LLDS     +EK A PN  + RGF  ++ +KAAVE+ACP  VSCAD+L + A  +V LS GP WAVPLGRRD R    ++AN+   LP P     EL   F    L D  DLV LS  HT G + C  F  RLY+F   +N    DPTL+  ++ +LR
Sbjct:   46 RALGAAPSLAGPLLRMHFHDCFVRGCDGSVLLDSAGNSTAEKDATPNQ-TLRGFGFVERVKAAVEKACPGTVSCADVLALMARDAVWLSKGPFWAVPLGRRDGRV---SIANETDQLPPPTANFTELTQMFAAKNL-DLKDLVVLSAGHTIGTSHCFSFTDRLYNFTGLDNAHDIDPTLELQYMARLR 228          
BLAST of CX288647 vs. ExPASy Swiss-Prot
Match: PER60_ARATH (Peroxidase 60 OS=Arabidopsis thaliana GN=PER60 PE=1 SV=1)

HSP 1 Score: 152.525 bits (384), Expect = 1.280e-36
Identity = 86/186 (46.24%), Postives = 118/186 (63.44%), Query Frame = 2
Query:    5 KAFSSDIRIGASLIRLHFHDCFVDGCDASILLDSTNTIDSEKFAAPNNNSARGFEVIDNMKAAVERACPRVVSCADILTIAAERSVALSGG--PSWAVPLGRRDSRTANRALANQNLPGPFDTLDELKSSF--RNVGLNDKLDLVALSGAHTFGRAQCQFFRGRLYDFNNTGKPDPTLDATFLQQL 550
            +AF  D  I  ++IRL+FHDCF +GCDAS+LLD +N   SEK A+PN  S RG+EVID++K+AVE+ C RVVSCADI+ +A    V L+ G    + +P GR D + ++  L   +LP P  T+ E  + F  R + LN   D+V L G HT G   C F   RLY+F NT KPDP++D   +++L
Sbjct:   50 EAFIKDSSIAPAMIRLYFHDCFSNGCDASLLLDGSN---SEKKASPNL-SVRGYEVIDDIKSAVEKECDRVVSCADIIALATRDLVTLASGGKTRYEIPTGRLDGKISSALLV--DLPSPKMTVAETAAKFDQRKLSLN---DMVLLLGGHTIGVTHCSFIMDRLYNFQNTQKPDPSMDPKLVEEL 226          
BLAST of CX288647 vs. ExPASy Swiss-Prot
Match: PER26_ARATH (Probable peroxidase 26 OS=Arabidopsis thaliana GN=PER26 PE=2 SV=2)

HSP 1 Score: 151.369 bits (381), Expect = 2.852e-36
Identity = 81/182 (44.51%), Postives = 113/182 (62.09%), Query Frame = 2
Query:   11 FSSDIRIGASLIRLHFHDCFVDGCDASILLDSTNTIDSEKFAAPNNNSARGFEVIDNMKAAVERACPRVVSCADILTIAAERSVALSGGPSWAVPLGRRDSRTANRALANQNLPGPFDTLDELKSSFRNVGLNDKLDLVALSGAHTFGRAQCQFFRGRLYDFNNTGKPDPTLDATFLQQLRK 556
            + +D  I   L+RL + DCFV GCDAS+LL+  N   SEK A P N    GF +ID +K  +E+ CP VVSCADIL +A   +V L+G PS+ V  GRRD  T+++     +LP P  + D+  S F++ GLN  LD+  L G+H+ GR  C +   RLY++N TGKP PT++  FL ++ K
Sbjct:   61 YKNDKSIAPKLLRLLYSDCFVSGCDASVLLEGPN---SEKMA-PQNRGLGGFVLIDKIKIVLEQRCPGVVSCADILNLATRDAVHLAGAPSYPVFTGRRDGLTSDKQTV--DLPSPSISWDQAMSYFKSRGLN-VLDMATLLGSHSMGRTHCSYVVDRLYNYNKTGKPSPTMNKYFLSEMAK 235          
BLAST of CX288647 vs. ExPASy Swiss-Prot
Match: PER1_MAIZE (Peroxidase 1 OS=Zea mays GN=PER1 PE=1 SV=1)

HSP 1 Score: 151.369 bits (381), Expect = 2.852e-36
Identity = 89/188 (47.34%), Postives = 115/188 (61.17%), Query Frame = 2
Query:    8 AFSSDIRIGASLIRLHFHDCFVDGCDASILLD-STNTIDSEKFAAPNNNSARGFEVIDNMKAAVERACPRVVSCADILTIAAERSVALSGGPSWAVPLGRRDSRTANRALANQNLPGPFDTLDELKSSFRNVGLNDKLDLVALSGAHTFGRAQCQFFRGRLYDFNN---TGKPDPTLDATFLQQLRKL 559
            AF+ D  I A LIRLHFHDCFV GCD S+LL  +     +E+ A PNN S RGF+VID  K AVE++CPR VSCADI+  AA  S++L+G  S+ VP GRRD R +N A    +LP P  T   L   F+   L+ + D+V LSGAHT GR+ C  F  R+++ +    T   D  L  ++ Q LR L
Sbjct:   58 AFAKDAGIAAGLIRLHFHDCFVRGCDGSVLLTVNPGGGQTERDALPNNPSLRGFDVIDAAKTAVEQSCPRTVSCADIVAFAARDSISLTGSVSYQVPAGRRDGRVSN-ATETVDLPPPTSTAQSLTDLFKAKELSVE-DMVVLSGAHTVGRSFCASFFKRVWNTSTNPATAIVDAGLSPSYAQLLRAL 243          
BLAST of CX288647 vs. ExPASy Swiss-Prot
Match: PER1_SOLLC (Suberization-associated anionic peroxidase 1 OS=Solanum lycopersicum GN=TAP1 PE=3 SV=1)

HSP 1 Score: 150.214 bits (378), Expect = 6.354e-36
Identity = 87/157 (55.41%), Postives = 105/157 (66.88%), Query Frame = 2
Query:    8 AFSSDIRIGASLIRLHFHDCFVDGCDASILLDSTN-TIDSEKFAAPNNNSARGFEVIDNMKAAVERACPRV-VSCADILTIAAERSVALSGGPSWAVPLGRRDSRTANRALANQNLPGPFD--TLDELKSSFRNVGLNDKLDLVALSGAHTFGRAQC 466
            A  ++ R+GASLIRLHFHDCFVDGCD  ILLD  N T   E+ + PN NSARG+EVI   K +V   CP V VSCADIL IAA  SVA  GG +++V LGR D+RTAN + A   LP PFD  T+   K S +N  L    ++VAL+GAHT G A+C
Sbjct:   93 AIDAETRMGASLIRLHFHDCFVDGCDGGILLDDINGTFTGEQNSPPNANSARGYEVIAQAKQSVINTCPNVSVSCADILAIAARDSVAKLGGQTYSVALGRSDARTANFSGAINQLPAPFDNLTVQIQKFSDKNFTLR---EMVALAGAHTVGFARC 246          
BLAST of CX288647 vs. ExPASy Swiss-Prot
Match: PER47_ARATH (Peroxidase 47 OS=Arabidopsis thaliana GN=PER47 PE=2 SV=1)

HSP 1 Score: 148.673 bits (374), Expect = 1.849e-35
Identity = 84/183 (45.90%), Postives = 113/183 (61.75%), Query Frame = 2
Query:    8 AFSSDIRIGASLIRLHFHDCFVDGCDASILLDSTNTIDSEKFAAPNNNSARGFEVIDNMKAAVERACPRVVSCADILTIAAERSVALSGGPSWAVPLGRRDSRTANRALANQNLPGPFDTLDELKSSFRNVGLNDKLDLVALSGAHTFGRAQCQFFRGRLYDFNNTGKPDPTLDATFLQQLRK 556
            A  +D  + A LIR+ FHDCF++GCDASILLDST    +EK  +P N S RG+E+ID+ K  +E  CP VVSCADI+ +AA  +V  +GGP + +P GR D +  ++    +NLP PF    +L  +F   G   + D+VALSGAHT G A+C  F+ RL        PD +LD+TF   L K
Sbjct:   49 ALQADPTLAAGLIRMLFHDCFIEGCDASILLDSTKDNTAEK-DSPANLSLRGYEIIDDAKEKIENRCPGVVSCADIVAMAARDAVFWAGGPYYDIPKGRFDGK-RSKIEDTRNLPSPFLNASQLIQTFGQRGFTPQ-DVVALSGAHTLGVARCSSFKARL------TVPDSSLDSTFANTLSK 222          
BLAST of CX288647 vs. ExPASy Swiss-Prot
Match: PERX_SOLTU (Suberization-associated anionic peroxidase OS=Solanum tuberosum PE=2 SV=2)

HSP 1 Score: 147.132 bits (370), Expect = 5.379e-35
Identity = 83/155 (53.55%), Postives = 100/155 (64.52%), Query Frame = 2
Query:    8 AFSSDIRIGASLIRLHFHDCFVDGCDASILLDSTN-TIDSEKFAAPNNNSARGFEVIDNMKAAVERACPRV-VSCADILTIAAERSVALSGGPSWAVPLGRRDSRTANRALANQNLPGPFDTLDELKSSFRNVGLNDKLDLVALSGAHTFGRAQC 466
            A  ++ R+GASLIRLHFHDCFVDGCD  ILLD  N T   E+ + PN NSARG+EVI   K +V   CP + VSCADIL IAA  SVA  GG ++ V LGR D+RTAN   A   LP PFD L      F +     + ++VAL+GAHT G A+C
Sbjct:   92 AIDAETRMGASLIRLHFHDCFVDGCDGGILLDDINGTFTGEQNSPPNANSARGYEVIAQAKQSVIDTCPNISVSCADILAIAARDSVAKLGGQTYNVALGRSDARTANFTGALTQLPAPFDNLTVQIQKFNDKNFTLR-EMVALAGAHTVGFARC 245          
The following BLAST results are available for this feature:
BLAST of CX288647 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 109
Match NameE-valueIdentityDescription
PER66_MAIZE1.512e-3748.09Peroxidase 66 OS=Zea mays GN=PER66 PE=1 SV=1[more]
PER62_ARATH3.369e-3749.19Peroxidase 62 OS=Arabidopsis thaliana GN=PER62 PE=... [more]
PER61_ARATH4.400e-3745.16Probable peroxidase 61 OS=Arabidopsis thaliana GN=... [more]
PER1_ORYSJ5.747e-3746.28Peroxidase 1 OS=Oryza sativa subsp. japonica GN=PR... [more]
PER60_ARATH1.280e-3646.24Peroxidase 60 OS=Arabidopsis thaliana GN=PER60 PE=... [more]
PER26_ARATH2.852e-3644.51Probable peroxidase 26 OS=Arabidopsis thaliana GN=... [more]
PER1_MAIZE2.852e-3647.34Peroxidase 1 OS=Zea mays GN=PER1 PE=1 SV=1[more]
PER1_SOLLC6.354e-3655.41Suberization-associated anionic peroxidase 1 OS=So... [more]
PER47_ARATH1.849e-3545.90Peroxidase 47 OS=Arabidopsis thaliana GN=PER47 PE=... [more]
PERX_SOLTU5.379e-3553.55Suberization-associated anionic peroxidase OS=Sola... [more]

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Properties
Property NameValue
Genbank descriptionC02002G07SK IF1 Citrus clementina cDNA clone C02002G07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX288647 ID=CX288647; Name=CX288647; organism=Citrus clementina; type=EST; length=559bp
TAAGAAAGCTTTCTCGTCCGATATCCGGATCGGTGCCAGCCTCATCAGGC
TTCATTTCCATGACTGTTTTGTTGATGGGTGTGATGCATCGATTTTGCTG
GACAGCACTAACACCATAGACAGCGAGAAATTTGCTGCGCCAAATAACAA
TTCGGCGAGGGGTTTTGAAGTTATTGATAACATGAAAGCTGCCGTTGAAA
GGGCATGTCCAAGGGTTGTTTCCTGCGCTGATATTCTTACTATTGCGGCT
GAACGATCCGTTGCTTTGTCAGGGGGTCCGTCATGGGCAGTTCCATTGGG
AAGAAGAGACAGCAGAACGGCAAACAGAGCTCTTGCAAATCAGAATCTTC
CAGGACCATTTGATACTCTTGATGAGCTCAAATCTAGTTTTAGAAATGTT
GGCCTCAATGACAAGCTTGATCTTGTTGCACTCTCCGGAGCACACACGTT
CGGAAGGGCTCAGTGCCAATTTTTCAGGGGCAGATTATACGATTTTAACA
ACACTGGCAAGCCAGACCCAACCCTAGACGCAACCTTCTTACAACAACTG
AGGAAACTA
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