CX288647

Overview
NameCX288647
Unique NameCX288647
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length559
Libraries
Library NameType
IF1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX288647 vs. ExPASy Swiss-Prot
Match: PER2_MAIZE (Peroxidase 2 OS=Zea mays GN=PER2 PE=2 SV=1)

HSP 1 Score: 134.42 bits (337), Expect = 3.608e-31
Identity = 81/161 (50.31%), Postives = 106/161 (65.84%), Query Frame = 2
Query:    2 KKAFSSDIRIGASLIRLHFHDCFVDGCDASILLDSTNTIDS-EKFAAPNNNSARGFEVIDNMKAAVERACPRVVSCADILTIAA-ERSVALSGGP-SWAVPLGRRDSRTANRALANQNLPGPFDTLDELKSSFRNVGLNDKLDLVALSGAHTFGRAQCQFF 475
            +KA + +   GA++IR+ FHDCFV+GCDAS+LLD T    + EK AAPNN S RGFE+ID +K A+E ACP VVSCADI+  AA + S  LS G  S+ +P GR D   +N + + + L  P   L +L SSF   G++ + DLV LSGAHT GR+ C  F
Sbjct:   56 EKAIAQNPGNGAAVIRMLFHDCFVEGCDASVLLDPTPFSPTPEKLAAPNNPSLRGFELIDAIKDALEAACPGVVSCADIIAFAARDASCFLSQGKVSFDMPSGRLDGTFSNASESVKFLVPPTSNLSDLASSFAVKGMSLE-DLVVLSGAHTVGRSHCSSF 215          
BLAST of CX288647 vs. ExPASy Swiss-Prot
Match: PER24_ARATH (Peroxidase 24 OS=Arabidopsis thaliana GN=PER24 PE=2 SV=1)

HSP 1 Score: 134.035 bits (336), Expect = 4.712e-31
Identity = 81/185 (43.78%), Postives = 106/185 (57.30%), Query Frame = 2
Query:    5 KAFSSDIRIGASLIRLHFHDCFVDGCDASILLDS-TNTIDSEKFAAPNNNSARGFEVIDNMKAAVERACPRVVSCADILTIAAERSVALS-GGPSWAVPLGRRDSRTANRALANQNLPGPFDTLDELKSSFRNVGLNDKLDLVALSGAHTFGRAQCQFFRGRLYDFNNTGKPDPTLDATFLQQLR 553
            K   ++  +   L+R+H+HDCFV GCDAS+LLDS      SEK A P N S  GFE+ID +K  +E+ CP  VSCADILT+AA  +V+     P W V  GR D R +    A ++LP        L+  F    L D +DLVALSGAHT G A C  F  RL +F   G  DP+L+ ++   L+
Sbjct:   68 KKVEANRSLAPKLLRVHYHDCFVRGCDASLLLDSVAGKAVSEKEARP-NLSLSGFEIIDEIKYILEKRCPNTVSCADILTLAARDAVSYEFERPLWNVFTGRVDGRVSLATEAARDLPSAGANFTTLQKLFAESDL-DVVDLVALSGAHTIGIAHCGVFGRRLLNFTGKGDTDPSLNPSYASFLK 250          
BLAST of CX288647 vs. ExPASy Swiss-Prot
Match: PER50_ARATH (Peroxidase 50 OS=Arabidopsis thaliana GN=PER50 PE=1 SV=1)

HSP 1 Score: 133.65 bits (335), Expect = 6.154e-31
Identity = 75/173 (43.35%), Postives = 105/173 (60.69%), Query Frame = 2
Query:   44 IRLHFHDCFVDGCDASILLDSTNTIDSEKFAAPNNNSAR-GFEVIDNMKAAVERA--CPRVVSCADILTIAAERSVALSGGPSWAVPLGRRDSRTANRALANQNLPGPFDTLDELKSSFRNVGLNDKLDLVALSGAHTFGRAQCQFFRGRLYDFNNTGKPDPTLDATFLQQLR 553
            +RL+FHDCFV+GCDAS+++ STN   +EK    N + A  GF+ +   K A++    C   VSCADILT+A    V L+GGP + V LGR D  ++  A     LP P D +++L S F   GL+   D++ALSGAHT G A C     R+Y FN T K DPT++  ++ +L+
Sbjct:   62 LRLYFHDCFVNGCDASVMIASTNNNKAEKDHEENLSLAGDGFDTVIKAKEALDAVPNCRNKVSCADILTMATRDVVNLAGGPQYDVELGRLDGLSSTAASVGGKLPHPTDDVNKLTSLFAKNGLSLN-DMIALSGAHTLGFAHCTKVFNRIYTFNKTTKVDPTVNKDYVTELK 233          
BLAST of CX288647 vs. ExPASy Swiss-Prot
Match: PER16_ARATH (Peroxidase 16 OS=Arabidopsis thaliana GN=PER16 PE=1 SV=2)

HSP 1 Score: 133.265 bits (334), Expect = 8.038e-31
Identity = 79/190 (41.58%), Postives = 109/190 (57.37%), Query Frame = 2
Query:    2 KKAFSSDIRIGASLIRLHFHDCFVDGCDASILLDSTNTIDSEKFAAPNNNSARG--FEVIDNMKAAVERA--CPRVVSCADILTIAAERSVALSGGPSWAVPLGRRDSRTANRALANQNLPGPFDTLDELKSSFRNVGLNDKLDLVALSGAHTFGRAQCQFFRGRLYDFNNTGKPDPTLDATFLQQLRKL 559
            ++ F        + +RL FHDCFV GCDASILL S +  D      P++ S  G  F+ +   K A++R   C   VSCADIL +A    V L+GGP++ V LGRRD R +  A    +LP P   LD+L + F   GL+ + D++ALSGAHT G A C  F  R+Y+F+     DPTL+  +  QLR++
Sbjct:   46 RQKFQQTFVTAPATLRLFFHDCFVRGCDASILLASPSEKDH-----PDDKSLAGDGFDTVAKAKQALDRDPNCRNKVSCADILALATRDVVVLTGGPNYPVELGRRDGRLSTVASVQHSLPQPSFKLDQLNTMFARHGLS-QTDMIALSGAHTIGFAHCGKFSKRIYNFSPKRPIDPTLNIRYALQLRQM 229          
BLAST of CX288647 vs. ExPASy Swiss-Prot
Match: PER73_ARATH (Peroxidase 73 OS=Arabidopsis thaliana GN=PER73 PE=1 SV=1)

HSP 1 Score: 130.954 bits (328), Expect = 3.989e-30
Identity = 75/173 (43.35%), Postives = 103/173 (59.54%), Query Frame = 2
Query:   44 IRLHFHDCFVDGCDASILLDSTNTIDSEKFAAPNNNSAR-GFEVIDNMKAAVER--ACPRVVSCADILTIAAERSVALSGGPSWAVPLGRRDSRTANRALANQNLPGPFDTLDELKSSFRNVGLNDKLDLVALSGAHTFGRAQCQFFRGRLYDFNNTGKPDPTLDATFLQQLR 553
            +RL FHDCFV+GCDAS+++ ST T  +EK    N + A  GF+V+   K A++   +C   VSCADIL +A    V  + GPS+AV LGR D   +  A  N NLPGP + + EL   F    L  + D++ALS AHT G A C     R+Y+FN T   DPTL+  + ++L+
Sbjct:   62 LRLFFHDCFVNGCDASVMIQSTPTNKAEKDHPDNISLAGDGFDVVIKAKKALDAIPSCKNKVSCADILALATRDVVVAAKGPSYAVELGRFDGLVSTAASVNGNLPGPNNKVTELNKLFAKNKLTQE-DMIALSAAHTLGFAHCGKVFNRIYNFNLTHAVDPTLNKAYAKELQ 233          
BLAST of CX288647 vs. ExPASy Swiss-Prot
Match: PER8_ARATH (Peroxidase 8 OS=Arabidopsis thaliana GN=PER8 PE=2 SV=1)

HSP 1 Score: 129.798 bits (325), Expect = 8.887e-30
Identity = 70/176 (39.77%), Postives = 101/176 (57.39%), Query Frame = 2
Query:   29 IGASLIRLHFHDCFVDGCDASILLDSTNTIDSEKFAAPNNNSARGFEVIDNMKAAVERACPRVVSCADILTIAAERSVALSGGPSWAVPLGRRDSRTANRALANQNLPGPFDTLDELKSSFRNVGLNDKLDLVALSGAHTFGRAQCQFFRGRLYDFNNTGKPDPTLDATFLQQLRK 556
            + A+L+R+ FHDC V GCDAS+L+D T    SEK +   N   RGFE+ID  K  +E  CP+ VSCADI+TIA   S+AL+GGP + V  GRRD   +N   ++  L GP  ++     +F+++G N    +  + G HT G A C  F+ R+         DP +D+    +L+K
Sbjct:   52 VTAALLRMQFHDCVVKGCDASLLIDPTTERPSEK-SVGRNAGVRGFEIIDEAKKELELVCPKTVSCADIVTIATRDSIALAGGPKFKVRTGRRDGLRSNP--SDVKLLGPTVSVATSIKAFKSIGFNVSTMVALIGGGHTVGVAHCSLFQDRI--------KDPKMDSKLRAKLKK 216          
BLAST of CX288647 vs. ExPASy Swiss-Prot
Match: PER35_ARATH (Peroxidase 35 OS=Arabidopsis thaliana GN=PER35 PE=1 SV=1)

HSP 1 Score: 129.798 bits (325), Expect = 8.887e-30
Identity = 77/188 (40.96%), Postives = 109/188 (57.98%), Query Frame = 2
Query:    2 KKAFSSDIRIGASLIRLHFHDCFVDGCDASILLDSTNTIDSEKFAAPNNNSAR-GFEVIDNMKAAVER--ACPRVVSCADILTIAAERSVALSGGPSWAVPLGRRDSRTANRALANQNLPGPFDTLDELKSSFRNVGLNDKLDLVALSGAHTFGRAQCQFFRGRLYDFNNTGKPDPTLDATFLQQLRK 556
            KK   + + + A+L RL FHDCFV+GCDAS+++ ST    +EK    N + A  GF+V+   K A++   +C   VSCADILT+A    V  +GGPS+ V LGR D   +  +    NLPGP D +D+L + F    L  + D++ALS AHT G A C     R++ FN     DPTL+  +  +L+K
Sbjct:   49 KKIKKTFVAVPATL-RLFFHDCFVNGCDASVMIQSTPKNKAEKDHPDNISLAGDGFDVVIQAKKALDSNPSCRNKVSCADILTLATRDVVVAAGGPSYEVELGRFDGLVSTASSVEGNLPGPSDNVDKLNALFTKNKLTQE-DMIALSAAHTLGFAHCGKVFKRIHKFNGINSVDPTLNKAYAIELQK 234          
BLAST of CX288647 vs. ExPASy Swiss-Prot
Match: PER45_ARATH (Peroxidase 45 OS=Arabidopsis thaliana GN=PER45 PE=1 SV=1)

HSP 1 Score: 128.642 bits (322), Expect = 1.980e-29
Identity = 74/190 (38.95%), Postives = 109/190 (57.37%), Query Frame = 2
Query:    2 KKAFSSDIRIGASLIRLHFHDCFVDGCDASILLDSTNTIDSEKFAAPNNNSARG--FEVIDNMKAAVERA--CPRVVSCADILTIAAERSVALSGGPSWAVPLGRRDSRTANRALANQNLPGPFDTLDELKSSFRNVGLNDKLDLVALSGAHTFGRAQCQFFRGRLYDFNNTGKPDPTLDATFLQQLRKL 559
            ++ F        + +RL FHDCFV GCDASI++ S +  D      P++ S  G  F+ +   K AV+    C   VSCADIL +A    V L+GGPS+ V LGRRD R + +A     LP P   L++L   F   GL+ + D++ALSGAHT G A C     R+Y+F+ T + DP+++  ++ QL+++
Sbjct:   48 RQKFQQTFVTAPATLRLFFHDCFVRGCDASIMIASPSERDH-----PDDMSLAGDGFDTVVKAKQAVDSNPNCRNKVSCADILALATREVVVLTGGPSYPVELGRRDGRISTKASVQSQLPQPEFNLNQLNGMFSRHGLS-QTDMIALSGAHTIGFAHCGKMSKRIYNFSPTTRIDPSINRGYVVQLKQM 231          
BLAST of CX288647 vs. ExPASy Swiss-Prot
Match: PER18_ARATH (Peroxidase 18 OS=Arabidopsis thaliana GN=PER18 PE=2 SV=1)

HSP 1 Score: 126.331 bits (316), Expect = 9.826e-29
Identity = 78/185 (42.16%), Postives = 102/185 (55.14%), Query Frame = 2
Query:    2 KKAFSSDIRIGASLIRLHFHDCFVDGCDASILLDSTNTIDSEKFAAPNNNSARGFEVIDNMKAAVERACPRVVSCADILTIAAERSVALSGGPSWAVPLGRRDSRTANRALANQNLPGPFDTLDELKSSFRNVGLNDKLDLVALSGAHTFGRAQCQFFRGR--LYDFNNTGKPDPTLDATFLQQL 550
            + A SSD  +   L+RL FHDCFV GCD S+L+    T  S+    P N S  GF VI+++K  +E  CP  VSCADIL +AA  +V   GGP   +P GRRD R +  A    N+     T+D++ + F + GL+   DLV LSGAHT G A C  F  R  L    N    D +LD ++ Q L
Sbjct:   52 RSASSSDPSVLGKLLRLIFHDCFVQGCDGSVLIRGNGTERSD----PGNASLGGFAVIESVKNILEIFCPGTVSCADILVLAARDAVEALGGPVVPIPTGRRDGRVSMAANVRPNIIDTDFTVDKMINIFSSKGLSVH-DLVVLSGAHTIGAAHCNTFNSRFKLDPKGNLELIDASLDNSYAQTL 231          
BLAST of CX288647 vs. ExPASy Swiss-Prot
Match: PER63_ARATH (Peroxidase 63 OS=Arabidopsis thaliana GN=PER63 PE=2 SV=1)

HSP 1 Score: 123.25 bits (308), Expect = 8.318e-28
Identity = 66/159 (41.51%), Postives = 99/159 (62.26%), Query Frame = 2
Query:   35 ASLIRLHFHDCFVDGCDASILLDSTNTIDSEKFAAPNNN-SARGFEVIDNMKAAVERACPRVVSCADILTIAAERSVALSGGPSWAVPLGRRDSRTANRALANQNLPGPFDTLDELKSSFRNVGLNDKLDLVALSGAHTFGRAQCQFFRGRLYDFNNTG 508
            A+ +RL FHDCF +GCDAS+L+ ST    +E+ ++ N +    GF+V+   K A+E ACP  VSC+DI+ +A    +   GGP + + LGRRDSRT+  +L +  LP P   + +L   F + G + + ++VALSGAHT G + C+ F  R+   N+TG
Sbjct:   64 AAALRLFFHDCFPNGCDASVLVSSTAFNTAERDSSINLSLPGDGFDVVIRAKTALELACPNTVSCSDIIAVAVRDLLVTVGGPYYEISLGRRDSRTSKSSLVSDLLPLPSMQISKLIDQFSSRGFSVQ-EMVALSGAHTIGFSHCKEFTNRVNPNNSTG 221          
The following BLAST results are available for this feature:
BLAST of CX288647 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 109
Match NameE-valueIdentityDescription
PER2_MAIZE3.608e-3150.31Peroxidase 2 OS=Zea mays GN=PER2 PE=2 SV=1[more]
PER24_ARATH4.712e-3143.78Peroxidase 24 OS=Arabidopsis thaliana GN=PER24 PE=... [more]
PER50_ARATH6.154e-3143.35Peroxidase 50 OS=Arabidopsis thaliana GN=PER50 PE=... [more]
PER16_ARATH8.038e-3141.58Peroxidase 16 OS=Arabidopsis thaliana GN=PER16 PE=... [more]
PER73_ARATH3.989e-3043.35Peroxidase 73 OS=Arabidopsis thaliana GN=PER73 PE=... [more]
PER8_ARATH8.887e-3039.77Peroxidase 8 OS=Arabidopsis thaliana GN=PER8 PE=2 ... [more]
PER35_ARATH8.887e-3040.96Peroxidase 35 OS=Arabidopsis thaliana GN=PER35 PE=... [more]
PER45_ARATH1.980e-2938.95Peroxidase 45 OS=Arabidopsis thaliana GN=PER45 PE=... [more]
PER18_ARATH9.826e-2942.16Peroxidase 18 OS=Arabidopsis thaliana GN=PER18 PE=... [more]
PER63_ARATH8.318e-2841.51Peroxidase 63 OS=Arabidopsis thaliana GN=PER63 PE=... [more]

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Properties
Property NameValue
Genbank descriptionC02002G07SK IF1 Citrus clementina cDNA clone C02002G07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX288647 ID=CX288647; Name=CX288647; organism=Citrus clementina; type=EST; length=559bp
TAAGAAAGCTTTCTCGTCCGATATCCGGATCGGTGCCAGCCTCATCAGGC
TTCATTTCCATGACTGTTTTGTTGATGGGTGTGATGCATCGATTTTGCTG
GACAGCACTAACACCATAGACAGCGAGAAATTTGCTGCGCCAAATAACAA
TTCGGCGAGGGGTTTTGAAGTTATTGATAACATGAAAGCTGCCGTTGAAA
GGGCATGTCCAAGGGTTGTTTCCTGCGCTGATATTCTTACTATTGCGGCT
GAACGATCCGTTGCTTTGTCAGGGGGTCCGTCATGGGCAGTTCCATTGGG
AAGAAGAGACAGCAGAACGGCAAACAGAGCTCTTGCAAATCAGAATCTTC
CAGGACCATTTGATACTCTTGATGAGCTCAAATCTAGTTTTAGAAATGTT
GGCCTCAATGACAAGCTTGATCTTGTTGCACTCTCCGGAGCACACACGTT
CGGAAGGGCTCAGTGCCAATTTTTCAGGGGCAGATTATACGATTTTAACA
ACACTGGCAAGCCAGACCCAACCCTAGACGCAACCTTCTTACAACAACTG
AGGAAACTA
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