CX288653
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX288653 vs. ExPASy Swiss-Prot
Match: MAM3_YEAST (Protein MAM3 OS=Saccharomyces cerevisiae GN=MAM3 PE=1 SV=1) HSP 1 Score: 112.849 bits (281), Expect = 1.109e-24 Identity = 60/169 (35.50%), Postives = 93/169 (55.03%), Query Frame = 2 Query: 8 LFFPISYPISKILDLMLGKGHAVLLRRAELKTFVNFHGNEAGKGGDLTHDETTIIAGALELTEKTAKDAMTPISKAFSXXXXXXXXXXXXNAIMTMGHSRVPVYSGN-PTNIIGLILVKNLLSVDYRDAVPLRKMIIRRIPRVSEDMPLYDILNEFQKGHSHIAVVYKD 511 L +P++YPI+ +LD MLG+ H + +++ LKT V H + LT DE TII+ L+L K ++ MTPI F+ I G SR+P++ N P N IG++LV+ L+S D D +P+ + +P S + +ILN FQ+G +H+ VV K+ Sbjct: 192 LMYPVAYPIATLLDYMLGEDHGTMYKKSGLKTLVTLHRTMGVER--LTKDEVTIISAVLDLKAKRVEEIMTPIENVFTMSADTILDDKTVEKIFNSGFSRIPIFLPNEPNNFIGMLLVRVLISYDPDDCLPISHFPLATLPETSPNTSCLNILNYFQEGKAHMCVVSKE 358
BLAST of CX288653 vs. ExPASy Swiss-Prot
Match: CNNM2_RAT (Metal transporter CNNM2 OS=Rattus norvegicus GN=Cnnm2 PE=2 SV=1) HSP 1 Score: 105.916 bits (263), Expect = 1.356e-22 Identity = 65/183 (35.52%), Postives = 96/183 (52.46%), Query Frame = 2 Query: 2 LCLFFPISYPISKILDLMLGKGHAVLLRRAELKTFVNFHGNEAGKGGDLTHDETTIIAGALELTEKTAKDAMTPISKAFSXXXXXXXXXXXXNAIMTMGHSRVPVYSGNPTNIIGLILVKNLLSVDYRDAVPLR---KMIIRRIPRVSEDMPLYDILNEFQKGHSHIAVVYKDLNEKKEGELF 541 + + FP SYP+SK+LD +LG+ + R +L + DL +E II GALEL KT +D MTP+ F + IM G++R+PV+ G +NI+ L+ VK+L VD D PL+ K + V D L +L EF+KG SH+A+V + +N + EG+ F Sbjct: 383 MMMTFPASYPVSKLLDCVLGQEIGTVYNREKLLEMLRV----TDPYNDLVKEELNIIQGALELRTKTVEDVMTPLRDCFMITGEAILDFNTMSEIMESGYTRIPVFEGERSNIVDLLFVKDLAFVDPDDCTPLKTITKFYNHPLHFVFNDTKLDAMLEEFKKGKSHLAIVQR-VNNEGEGDPF 560
BLAST of CX288653 vs. ExPASy Swiss-Prot
Match: CNNM2_MOUSE (Metal transporter CNNM2 OS=Mus musculus GN=Cnnm2 PE=1 SV=2) HSP 1 Score: 105.916 bits (263), Expect = 1.356e-22 Identity = 65/183 (35.52%), Postives = 96/183 (52.46%), Query Frame = 2 Query: 2 LCLFFPISYPISKILDLMLGKGHAVLLRRAELKTFVNFHGNEAGKGGDLTHDETTIIAGALELTEKTAKDAMTPISKAFSXXXXXXXXXXXXNAIMTMGHSRVPVYSGNPTNIIGLILVKNLLSVDYRDAVPLR---KMIIRRIPRVSEDMPLYDILNEFQKGHSHIAVVYKDLNEKKEGELF 541 + + FP SYP+SK+LD +LG+ + R +L + DL +E II GALEL KT +D MTP+ F + IM G++R+PV+ G +NI+ L+ VK+L VD D PL+ K + V D L +L EF+KG SH+A+V + +N + EG+ F Sbjct: 383 MMMTFPASYPVSKLLDCVLGQEIGTVYNREKLLEMLRV----TDPYNDLVKEELNIIQGALELRTKTVEDVMTPLRDCFMITGEAILDFNTMSEIMESGYTRIPVFEGERSNIVDLLFVKDLAFVDPDDCTPLKTITKFYNHPLHFVFNDTKLDAMLEEFKKGKSHLAIVQR-VNNEGEGDPF 560
BLAST of CX288653 vs. ExPASy Swiss-Prot
Match: CNNM2_HUMAN (Metal transporter CNNM2 OS=Homo sapiens GN=CNNM2 PE=2 SV=2) HSP 1 Score: 105.916 bits (263), Expect = 1.356e-22 Identity = 65/183 (35.52%), Postives = 96/183 (52.46%), Query Frame = 2 Query: 2 LCLFFPISYPISKILDLMLGKGHAVLLRRAELKTFVNFHGNEAGKGGDLTHDETTIIAGALELTEKTAKDAMTPISKAFSXXXXXXXXXXXXNAIMTMGHSRVPVYSGNPTNIIGLILVKNLLSVDYRDAVPLR---KMIIRRIPRVSEDMPLYDILNEFQKGHSHIAVVYKDLNEKKEGELF 541 + + FP SYP+SK+LD +LG+ + R +L + DL +E II GALEL KT +D MTP+ F + IM G++R+PV+ G +NI+ L+ VK+L VD D PL+ K + V D L +L EF+KG SH+A+V + +N + EG+ F Sbjct: 383 MMMTFPASYPVSKLLDCVLGQEIGTVYNREKLLEMLRV----TDPYNDLVKEELNIIQGALELRTKTVEDVMTPLRDCFMITGEAILDFNTMSEIMESGYTRIPVFEGERSNIVDLLFVKDLAFVDPDDCTPLKTITKFYNHPLHFVFNDTKLDAMLEEFKKGKSHLAIVQR-VNNEGEGDPF 560
BLAST of CX288653 vs. ExPASy Swiss-Prot
Match: CNNM4_XENTR (Metal transporter CNNM4 OS=Xenopus tropicalis GN=cnnm4 PE=2 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 5.698e-21 Identity = 61/183 (33.33%), Postives = 95/183 (51.91%), Query Frame = 2 Query: 2 LCLFFPISYPISKILDLMLGKGHAVLLRRAELKTFVNFHGNEAGKGGDLTHDETTIIAGALELTEKTAKDAMTPISKAFSXXXXXXXXXXXXNAIMTMGHSRVPVYSGNPTNIIGLILVKNLLSVDYRDAVPL---RKMIIRRIPRVSEDMPLYDILNEFQKGHSHIAVVYKDLNEKKEGELF 541 + L FP++YP+S++LD LG+ + R +L + +G + +E II GALEL KT +D MT + F ++IM G++R+PVY +NI+ ++ VK+L VD D PL + + V D L +L EF+KG SH+A+V K +N + EG+ F Sbjct: 307 MLLTFPVAYPVSRLLDCALGQEIGTVYNREKLLEMLKVTEPYSG----IVREEMNIIQGALELRTKTVEDVMTKVEDCFMLPSDAVLDFNTMSSIMESGYTRIPVYENERSNIVDILYVKDLAFVDPDDCTPLSTITRFYSHPLHFVFSDTKLDAVLEEFKKGKSHLAIVQK-VNSEGEGDPF 484
BLAST of CX288653 vs. ExPASy Swiss-Prot
Match: CNNM4_RAT (Metal transporter CNNM4 OS=Rattus norvegicus GN=Cnnm4 PE=1 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 1.658e-20 Identity = 62/183 (33.88%), Postives = 95/183 (51.91%), Query Frame = 2 Query: 2 LCLFFPISYPISKILDLMLGKGHAVLLRRAELKTFVNFHGNEAGKGGDLTHDETTIIAGALELTEKTAKDAMTPISKAFSXXXXXXXXXXXXNAIMTMGHSRVPVYSGNPTNIIGLILVKNLLSVDYRDAVPLR---KMIIRRIPRVSEDMPLYDILNEFQKGHSHIAVVYKDLNEKKEGELF 541 + L FP+S+PISK+LD +LG+ + R +L + DL +E +I GALEL KT +D MT + F + IM G++R+PV+ +NI+ ++ VK+L VD D PL+ + + V D L +L EF+KG SH+A+V K +N + EG+ F Sbjct: 308 MLLTFPLSFPISKLLDFVLGQEIRTVYNREKLMEMLKV----TEPYNDLVKEELNMIQGALELRTKTVEDIMTQLHDCFMIRSDAILDFNTMSEIMESGYTRIPVFEDEQSNIVDILYVKDLAFVDPDDCTPLKTITRFYNHPVHFVFHDTKLDAMLEEFKKGKSHLAIVQK-VNNEGEGDPF 485
BLAST of CX288653 vs. ExPASy Swiss-Prot
Match: CNNM4_MOUSE (Metal transporter CNNM4 OS=Mus musculus GN=Cnnm4 PE=1 SV=2) HSP 1 Score: 98.9821 bits (245), Expect = 1.658e-20 Identity = 62/183 (33.88%), Postives = 95/183 (51.91%), Query Frame = 2 Query: 2 LCLFFPISYPISKILDLMLGKGHAVLLRRAELKTFVNFHGNEAGKGGDLTHDETTIIAGALELTEKTAKDAMTPISKAFSXXXXXXXXXXXXNAIMTMGHSRVPVYSGNPTNIIGLILVKNLLSVDYRDAVPLR---KMIIRRIPRVSEDMPLYDILNEFQKGHSHIAVVYKDLNEKKEGELF 541 + L FP+S+PISK+LD +LG+ + R +L + DL +E +I GALEL KT +D MT + F + IM G++R+PV+ +NI+ ++ VK+L VD D PL+ + + V D L +L EF+KG SH+A+V K +N + EG+ F Sbjct: 307 MLLTFPLSFPISKLLDFVLGQEIRTVYNREKLMEMLKV----TEPYNDLVKEELNMIQGALELRTKTVEDIMTQLHDCFMIRSDAILDFNTMSEIMESGYTRIPVFEDEQSNIVDILYVKDLAFVDPDDCTPLKTITRFYNHPVHFVFHDTKLDAMLEEFKKGKSHLAIVQK-VNNEGEGDPF 484
BLAST of CX288653 vs. ExPASy Swiss-Prot
Match: CNNM4_HUMAN (Metal transporter CNNM4 OS=Homo sapiens GN=CNNM4 PE=1 SV=3) HSP 1 Score: 98.9821 bits (245), Expect = 1.658e-20 Identity = 62/183 (33.88%), Postives = 94/183 (51.37%), Query Frame = 2 Query: 2 LCLFFPISYPISKILDLMLGKGHAVLLRRAELKTFVNFHGNEAGKGGDLTHDETTIIAGALELTEKTAKDAMTPISKAFSXXXXXXXXXXXXNAIMTMGHSRVPVYSGNPTNIIGLILVKNLLSVDYRDAVPLR---KMIIRRIPRVSEDMPLYDILNEFQKGHSHIAVVYKDLNEKKEGELF 541 + L FP+S+PISK+LD LG+ + R +L + DL +E +I GALEL KT +D MT + F + IM G++R+PV+ +NI+ ++ VK+L VD D PL+ + + V D L +L EF+KG SH+A+V K +N + EG+ F Sbjct: 310 MLLTFPLSFPISKLLDFFLGQEIRTVYNREKLMEMLKV----TEPYNDLVKEELNMIQGALELRTKTVEDIMTQLQDCFMIRSDAILDFNTMSEIMESGYTRIPVFEDEQSNIVDILYVKDLAFVDPDDCTPLKTITRFYNHPVHFVFHDTKLDAMLEEFKKGKSHLAIVQK-VNNEGEGDPF 487
BLAST of CX288653 vs. ExPASy Swiss-Prot
Match: YJ23_SCHPO (Uncharacterized protein C4B3.03c OS=Schizosaccharomyces pombe GN=SPCC4B3.03c PE=1 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 2.828e-20 Identity = 58/167 (34.73%), Postives = 89/167 (53.29%), Query Frame = 2 Query: 8 LFFPISYPISKILDLMLGKGHAVLLRRAELKTFVNFHGNEAGKGGD-LTHDETTIIAGALELTEKTAKDAMTPISKAFSXXXXXXXXXXXXNAIMTMGHSRVPVYS-GNPTNIIGLILVKNLLSVDYRDAVPLRKMIIRRIPRVSEDMPLYDILNEFQKGHSHIAVV 502 L +PI+YP + ILD LG+ + + +++ LKT V H + G D L DE TII L+L EK A+ MTPI F+ I+ G+SR+PV+ G P + IG++L K L+ D D P+ K + +P+ + D+LN Q+G SH+ ++ Sbjct: 193 LLWPIAYPTALILDACLGESQSTMYKKSGLKTLVTLHRD---LGIDKLNQDEVTIITAVLDLREKHAESIMTPIEDVFTLPMDRILDEDLIGEIICAGYSRIPVHKPGFPHDFIGMLLTKTLIGYDPDDKWPVGKFALATLPQTWPNTSCLDLLNYCQEGKSHMILI 356
BLAST of CX288653 vs. ExPASy Swiss-Prot
Match: CNNM1_MOUSE (Metal transporter CNNM1 OS=Mus musculus GN=Cnnm1 PE=1 SV=4) HSP 1 Score: 89.3521 bits (220), Expect = 1.314e-17 Identity = 58/180 (32.22%), Postives = 91/180 (50.56%), Query Frame = 2 Query: 14 FPISYPISKILDLMLGKGHAVLLRRAELKTFVNFHGNEAGKGGDLTHDETTIIAGALELTEKTAKDAMTPISKAFSXXXXXXXXXXXXNAIMTMGHSRVPVYSGNPT-NIIGLILVKNLLSVDYRDAVPL---RKMIIRRIPRVSEDMPLYDILNEFQKGHSHIAVVYKDLNEKKEGELF 541 FP+ YP+ ++LD L + + R +L + A DL +E II GALEL K ++ +TP+ F + I+ G++R+PVY G+ NI+ ++ VK+L VD D PL + R + V D L +L EF+KG SH+A+V + +N + EG+ F Sbjct: 299 FPVCYPLGRLLDWALPQEISTFYTREKLLETLR----AADPYSDLVKEELNIIQGALELRTKVVEEVLTPLGDCFMLRSDAVLDFATVSEILRSGYTRIPVYEGDQRHNIVDILFVKDLAFVDPDDCTPLLTVTRFYNRPLHCVFNDTRLDTVLEEFKKGKSHLAIVQR-VNNEGEGDPF 473 The following BLAST results are available for this feature:
BLAST of CX288653 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 13
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Sequences
The
following sequences are available for this feature:
EST sequence >CX288653 ID=CX288653; Name=CX288653; organism=Citrus clementina; type=EST; length=557bpback to top |