CX288720

Overview
NameCX288720
Unique NameCX288720
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length561
Libraries
Library NameType
IF1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX288720 vs. ExPASy Swiss-Prot
Match: HSP83_DROME (Heat shock protein 83 OS=Drosophila melanogaster GN=Hsp83 PE=1 SV=1)

HSP 1 Score: 161.77 bits (408), Expect = 2.110e-39
Identity = 87/179 (48.60%), Postives = 113/179 (63.13%), Query Frame = 3
Query:    3 SARGMKETLKEKFEGLCKVIKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELXKRADADKNDKSVKDXXXXXXXXXXXTSGFSLDDPNTFGNRIHRMLKLGLSIEED----AGDADA--DMPPLEDAADDAEGSKMEEVD 521
            S +  +E  K KFE LCK++K +L                PCC+VT ++GW+ANMERIMKAQALRD +  GYM+ KK +EINP++PI+E L ++ADADKNDK+VKD           +SGFSLD P    +RI+RM+KLGL I+ED      DA +  D P L +  +DA  S MEEVD
Sbjct:  541 SEKKKREEDKAKFESLCKLMKSILDNKVEKVVVSNRLVDSPCCIVTSQFGWSANMERIMKAQALRDTATMGYMAGKKQLEINPDHPIVETLRQKADADKNDKAVKDLVILLFETSLLSSGFSLDSPQVHASRIYRMIKLGLGIDEDEPMTTDDAQSAGDAPSLVEDTEDA--SHMEEVD 717          
BLAST of CX288720 vs. ExPASy Swiss-Prot
Match: HSP83_DROAV (Heat shock protein 83 OS=Drosophila auraria GN=Hsp83 PE=3 SV=1)

HSP 1 Score: 157.918 bits (398), Expect = 3.047e-38
Identity = 83/174 (47.70%), Postives = 108/174 (62.07%), Query Frame = 3
Query:   18 KETLKEKFEGLCKVIKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELXKRADADKNDKSVKDXXXXXXXXXXXTSGFSLDDPNTFGNRIHRMLKLGLSIEEDA------GDADADMPPLEDAADDAEGSKMEEVD 521
            +E  K KFE LCK++  +L                PCC+VT ++GW+ANMERIMKAQALRD +  GYM+ KK +EINP++PI+E L ++ADADKNDK+VKD           +SGFSLD P    +RI+RM+KLGL I+ED         +  D P L +  +DA  S MEEVD
Sbjct:  545 REEDKAKFESLCKLMNAILDNKVEKVVVSNRLVDSPCCIVTSQFGWSANMERIMKAQALRDTATMGYMAGKKQLEINPDHPIVETLRQKADADKNDKAVKDLVILLFETSLLSSGFSLDSPQVHASRIYRMIKLGLGIDEDEPMTTEDAQSAGDAPSLVEDTEDA--SHMEEVD 716          
BLAST of CX288720 vs. ExPASy Swiss-Prot
Match: HSP83_TRYBB (Heat shock protein 83 OS=Trypanosoma brucei brucei GN=HSP83 PE=3 SV=1)

HSP 1 Score: 157.147 bits (396), Expect = 5.198e-38
Identity = 79/168 (47.02%), Postives = 106/168 (63.10%), Query Frame = 3
Query:   18 KETLKEKFEGLCKVIKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELXKRADADKNDKSVKDXXXXXXXXXXXTSGFSLDDPNTFGNRIHRMLKLGLSIEEDAGDADADMPPLEDAADDAEGSKMEEVD 521
            +E  K  +E LCK +K+VLG               PC LVT E+GW+A+ME+IM+ QALRD+SM+ YM  KKTMEIN  + I++EL +R +AD+NDK+ KD           TSGF+LDDP  + +RIHRM+KLGLS+++DA + +A  P    A      S MEEVD
Sbjct:  536 REEEKASYERLCKAMKEVLGDKVEKVVVSDRLATSPCILVTSEFGWSAHMEQIMRNQALRDSSMSAYMMRKKTMEINTTHAIVKELKRRVEADENDKAAKDLIFLLFDTSLLTSGFTLDDPTAYADRIHRMIKLGLSLDDDAEEEEAQAPVAAAANSSTGASGMEEVD 703          
BLAST of CX288720 vs. ExPASy Swiss-Prot
Match: HSP90_CAEBR (Heat shock protein 90 OS=Caenorhabditis briggsae GN=daf-21 PE=3 SV=1)

HSP 1 Score: 154.066 bits (388), Expect = 4.400e-37
Identity = 81/170 (47.65%), Postives = 108/170 (63.53%), Query Frame = 3
Query:   30 KEKFEGLCKVIKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELXKRADADKNDKSVKDXXXXXXXXXXXTSGFSLDDPNTFGNRIHRMLKLGLSIEEDAGDADADMPPLEDAAD------DAEGSKMEEVD 521
            K  +E LCKVIKD+L                PCC+VT EYGW+ANMERIMKAQALRD+S  GYM++KK +EINP++ IM+ L +R +ADKNDK+VKD           +SGFSL++P +  +RI+RM+KLGL I ++  D +    P    A+      D + S+MEEVD
Sbjct:  539 KVAYENLCKVIKDILEKKIEKVAVSNRLVSSPCCIVTSEYGWSANMERIMKAQALRDSSTMGYMAAKKHLEINPDHAIMKTLRERVEADKNDKTVKDLVVLLFETALLSSGFSLEEPQSHASRIYRMIKLGLDIGDE--DIEESAVPSSCTAEAKIEGADEDASRMEEVD 706          
BLAST of CX288720 vs. ExPASy Swiss-Prot
Match: HSP90_CAEEL (Heat shock protein 90 OS=Caenorhabditis elegans GN=daf-21 PE=1 SV=1)

HSP 1 Score: 152.525 bits (384), Expect = 1.280e-36
Identity = 83/171 (48.54%), Postives = 109/171 (63.74%), Query Frame = 3
Query:   30 KEKFEGLCKVIKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELXKRADADKNDKSVKDXXXXXXXXXXXTSGFSLDDPNTFGNRIHRMLKLGLSIEEDAGDADADMP-------PLEDAADDAEGSKMEEVD 521
            K  +E LCKVIKD+L                PCC+VT EYGW+ANMERIMKAQALRD+S  GYM++KK +EINP++ IM+ L  R + DKNDK+VKD            SGFSL++P +  +RI+RM+KLGL I +D  + D+ +P        +E A +DA  S+MEEVD
Sbjct:  535 KVAYENLCKVIKDILEKKVEKVGVSNRLVSSPCCIVTSEYGWSANMERIMKAQALRDSSTMGYMAAKKHLEINPDHAIMKTLRDRVEVDKNDKTVKDLVVLLFETALLASGFSLEEPQSHASRIYRMIKLGLDIGDDEIE-DSAVPSSCTAEAKIEGAEEDA--SRMEEVD 702          
BLAST of CX288720 vs. ExPASy Swiss-Prot
Match: HSP83_LEIIN (Heat shock protein 83-1 OS=Leishmania infantum GN=HSP83-1 PE=3 SV=2)

HSP 1 Score: 151.754 bits (382), Expect = 2.184e-36
Identity = 82/170 (48.24%), Postives = 107/170 (62.94%), Query Frame = 3
Query:   18 KETLKEKFEGLCKVIKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELXKRADADKNDKSVKDXXXXXXXXXXXTSGFSLDDPNTFGNRIHRMLKLGLSI--EEDAGDADADMPPLEDAADDAEGSKMEEVD 521
            +E  K   E LCK +K+VLG               PC LVT E+GW+A+ME+IM+ QALRD+SMA YM SKKTME+NP +PI++EL +R DAD+NDK+VKD           TSGF L+DP  +  RI+RM+KLGLS+  EE+   A+A +     A   A  S ME+VD
Sbjct:  532 REEEKAACEKLCKTMKEVLGDKVEKVIVSECLSTSPCILVTSEFGWSAHMEQIMRNQALRDSSMAQYMMSKKTMELNPRHPIIKELRRRVDADENDKAVKDLVFLLFDTSLLTSGFQLEDPTGYAERINRMIKLGLSLDEEEEVVAAEATVAETAPAEVTAGTSSMEQVD 701          
BLAST of CX288720 vs. ExPASy Swiss-Prot
Match: HSC90_DICDI (Heat shock cognate 90 kDa protein OS=Dictyostelium discoideum GN=hspD PE=1 SV=2)

HSP 1 Score: 151.754 bits (382), Expect = 2.184e-36
Identity = 85/169 (50.30%), Postives = 112/169 (66.27%), Query Frame = 3
Query:   42 EGLCKVIKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELXKRADADKNDKSVKDXXXXXXXXXXXTSGFSLDDPNTFGNRIHRMLKLGLSIEEDAG---------DADADMPPLEDAADDAEGSKMEEVD 521
            E L K +KDVLG               PC LVT EYGW+ANMERIMKAQALRD+SM+ YMSSKKT+E+NP++PI+ +L K+A A+K+ K+ KD           TSGFSLD+P++F +RIHRM+KLGLSI++D+              D+PPLE   ++ E S+ME+VD
Sbjct:  537 EELLKQVKDVLGDKVEKVVLSTRLANSPCVLVTSEYGWSANMERIMKAQALRDSSMSSYMSSKKTLELNPDHPIVRDLAKKA-AEKS-KTFKDFVYLLYETALLTSGFSLDEPSSFASRIHRMIKLGLSIQDDSSATTEESTNTTTSDDIPPLE---ENDEPSEMEKVD 700          
BLAST of CX288720 vs. ExPASy Swiss-Prot
Match: HSP90_SCHPO (Heat shock protein 90 homolog OS=Schizosaccharomyces pombe GN=swo1 PE=1 SV=2)

HSP 1 Score: 146.362 bits (368), Expect = 9.175e-35
Identity = 76/172 (44.19%), Postives = 108/172 (62.79%), Query Frame = 3
Query:    9 RGMKETLKEKFEGLCKVIKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELXKRADAD-KNDKSVKDXXXXXXXXXXXTSGFSLDDPNTFGNRIHRMLKLGLSIEEDAGDADADMPPLEDAADDAEGSKMEEVD 521
            +  +E L++++E   K +K +LG               PC L TG+YGW+ANMERIMKAQALRD SM+ YMSS+KT EINP++PI+ EL K+ + +   D+SVKD           +SGF+LDDP+ +  RI+R++ LGLSI+E+      ++     AA++   SKMEEVD
Sbjct:  533 KAAREKLEKEYEEFAKQLKTILGDKVEKVVVSNKIVGSPCLLTTGQYGWSANMERIMKAQALRDTSMSAYMSSRKTFEINPKSPIIAELKKKVEENGAEDRSVKDLATILYETALLSSGFTLDDPSAYAQRINRLISLGLSIDEEEEAPIEEISTESVAAENNAESKMEEVD 704          
BLAST of CX288720 vs. ExPASy Swiss-Prot
Match: HSP83_LEIDO (Heat shock protein 83 (Fragment) OS=Leishmania donovani GN=HSP83 PE=2 SV=1)

HSP 1 Score: 145.591 bits (366), Expect = 1.565e-34
Identity = 75/168 (44.64%), Postives = 104/168 (61.90%), Query Frame = 3
Query:   18 KETLKEKFEGLCKVIKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELXKRADADKNDKSVKDXXXXXXXXXXXTSGFSLDDPNTFGNRIHRMLKLGLSIEEDAGDADADMPPLEDAADDAEGSKMEEVD 521
            +E  K   E  CK +K+VLG               PC LVT E+GW+A+ME+IM+ QA+RD+SM+ YM SKKTME+NP +PI++ L +R +AD+NDK+VKD           TSGF L+DP  +  RI+RM+KLGLS++E+   A+A +     A      S ME+VD
Sbjct:  285 REEEKAACEKRCKTMKEVLGDKVEKVTVSDRLSTSPCILVTSEFGWSAHMEQIMRNQAVRDSSMSAYMMSKKTMELNPRHPIIKVLRRRVEADENDKAVKDLVFLLFDTSLLTSGFQLEDPTGYAKRINRMIKLGLSLDEEEEAAEATVVETAPAEVTVGTSSMEQVD 452          
BLAST of CX288720 vs. ExPASy Swiss-Prot
Match: HSP83_LEIAM (Heat shock protein 83 OS=Leishmania amazonensis GN=HSP83 PE=3 SV=1)

HSP 1 Score: 144.821 bits (364), Expect = 2.670e-34
Identity = 79/170 (46.47%), Postives = 108/170 (63.53%), Query Frame = 3
Query:   18 KETLKEKFEGLCKVIKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELXKRADADKNDKSVKDXXXXXXXXXXXTSGFSLDDPNTFGNRIHRMLKLGLSIEEDAGDADADMPPLEDAADD--AEGSKMEEVD 521
            +E  K   E LCK +K+VLG               PC LVT E+GW+A+ME++M+ QALRD+SMA YM SKKTME+NP++PI++EL +R +AD+NDK+VKD           TSGF L+DP T+  RI+RM+KLGLS++E+  +   +    E A  +  A  S ME VD
Sbjct:  533 REEEKATCEKLCKTMKEVLGDKVEKVTVSERLSTSPCILVTSEFGWSAHMEQMMRNQALRDSSMAQYMMSKKTMELNPKHPIIKELRRRVEADENDKAVKDLVFLLFDTSLLTSGFQLEDP-TYAERINRMIKLGLSLDEEEEEEAVEAAVAETAPAEVTAGTSSMELVD 701          
The following BLAST results are available for this feature:
BLAST of CX288720 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 74
Match NameE-valueIdentityDescription
HSP83_DROME2.110e-3948.60Heat shock protein 83 OS=Drosophila melanogaster G... [more]
HSP83_DROAV3.047e-3847.70Heat shock protein 83 OS=Drosophila auraria GN=Hsp... [more]
HSP83_TRYBB5.198e-3847.02Heat shock protein 83 OS=Trypanosoma brucei brucei... [more]
HSP90_CAEBR4.400e-3747.65Heat shock protein 90 OS=Caenorhabditis briggsae G... [more]
HSP90_CAEEL1.280e-3648.54Heat shock protein 90 OS=Caenorhabditis elegans GN... [more]
HSP83_LEIIN2.184e-3648.24Heat shock protein 83-1 OS=Leishmania infantum GN=... [more]
HSC90_DICDI2.184e-3650.30Heat shock cognate 90 kDa protein OS=Dictyostelium... [more]
HSP90_SCHPO9.175e-3544.19Heat shock protein 90 homolog OS=Schizosaccharomyc... [more]
HSP83_LEIDO1.565e-3444.64Heat shock protein 83 (Fragment) OS=Leishmania don... [more]
HSP83_LEIAM2.670e-3446.47Heat shock protein 83 OS=Leishmania amazonensis GN... [more]

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Properties
Property NameValue
Genbank descriptionC02003F05SK IF1 Citrus clementina cDNA clone C02003F05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX288720 ID=CX288720; Name=CX288720; organism=Citrus clementina; type=EST; length=561bp
ATTCGGCACGAGGGATGAAGGAAACCTTGAAGGAGAAATTTGAGGGTCTC
TGCAAGGTGATCAAGGATGTTTTGGGTGACAAGGTCGAGAAGGTTGTGGT
GTCTGACCGTGTTGTTGACTCACCCTGCTGTTTGGTGACTGGTGAGTATG
GATGGACAGCCAACATGGAGAGGATCATGAAGGCTCAGGCCTTGAGAGAC
AACAGCATGGCTGGTTACATGTCCAGCAAGAAGACCATGGAGATCAATCC
GGAGAACCCCATCATGGAGGAGCTCANGAAGAGGGCTGATGCGGACAAGA
ATGACAAGTCTGTGAAGGACCTTGTCCTTCTGCTCTTTGAGACTGCTCTC
CTCACTTCTGGTTTCAGCCTTGATGACCCTAACACTTTCGGCAACAGAAT
CCACAGGATGTTGAAACTCGGGCTGAGCATCGAGGAGGATGCTGGTGATG
CTGATGCTGACATGCCACCATTGGAGGATGCTGCTGACGATGCTGAGGGC
AGCAAGATGGAGGAAGTTGATTAAGAAGCTATAATAGTCTGATATACTAG
TCTTTTTTTCA
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