CX288727

Overview
NameCX288727
Unique NameCX288727
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length552
Libraries
Library NameType
IF1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX288727 vs. ExPASy Swiss-Prot
Match: COMT1_PRUDU (Caffeic acid 3-O-methyltransferase OS=Prunus dulcis GN=COMT1 PE=2 SV=1)

HSP 1 Score: 176.022 bits (445), Expect = 1.053e-43
Identity = 90/177 (50.85%), Postives = 126/177 (71.19%), Query Frame = 1
Query:   28 DESFAYANQLVTASVLPMTMQAIIGLGVFEIIAKAGPGAKLPASEIAAQLPATKNKDAPXMLDRMLRLLASHSVVECSIDDADDS--QRLYGLNDVSNYFVPNKDGVSFGPVLALIQDKVFMDSWSQLKEAITEGGVPFDRVHGTHAFEYPGLDPRFNEVFNIAMYNYTNLVIQKIL 552
            +E+  +A QL +ASVLPM ++A I L + EI+AKAGPG  L  ++IA+QLP TKN DAP MLDRMLRLLAS+S++  S+    D   +RLYGL  V  +   N++GVS  P+  + QDKV ++SW  LK+A+ EGG+PF++ +G  AFEY G DPRFN+VFN  M +++ + ++KIL
Sbjct:   17 EEANLFAMQLASASVLPMVLKAAIELDLLEIMAKAGPGVFLSPTDIASQLP-TKNPDAPVMLDRMLRLLASYSILTYSLRTLADGKVERLYGLGPVCKFLTKNEEGVSIAPLCLMNQDKVLLESWYHLKDAVLEGGIPFNKAYGMTAFEYHGTDPRFNKVFNRGMADHSTITMKKIL 192          
BLAST of CX288727 vs. ExPASy Swiss-Prot
Match: COMT1_EUCGU (Caffeic acid 3-O-methyltransferase OS=Eucalyptus gunnii GN=OMT PE=2 SV=1)

HSP 1 Score: 176.022 bits (445), Expect = 1.053e-43
Identity = 89/177 (50.28%), Postives = 127/177 (71.75%), Query Frame = 1
Query:   28 DESFAYANQLVTASVLPMTMQAIIGLGVFEIIAKAGPGAKLPASEIAAQLPATKNKDAPXMLDRMLRLLASHSVVECSIDDADDS--QRLYGLNDVSNYFVPNKDGVSFGPVLALIQDKVFMDSWSQLKEAITEGGVPFDRVHGTHAFEYPGLDPRFNEVFNIAMYNYTNLVIQKIL 552
            +E+  +A QL +ASVLPM ++A I L + EI+AKAGPGA L   E+AAQLP T+N +AP MLDR+ RLLAS+SV+ C++ +  D   +RLYGL  V  + V N+DGVS   +  + QDK+ M+SW  LK+A+ EGG+PF++ +G  AFEY G DPRFN++FN  M +++ + ++KIL
Sbjct:   18 EEANLFAMQLASASVLPMVLKAAIELDLLEIMAKAGPGAFLSPGEVAAQLP-TQNPEAPVMLDRIFRLLASYSVLTCTLRNLPDGKVERLYGLAPVCKFLVKNEDGVSIAALNLMNQDKILMESWYYLKDAVLEGGIPFNKAYGMTAFEYHGTDPRFNKIFNRGMSDHSTITMKKIL 193          
BLAST of CX288727 vs. ExPASy Swiss-Prot
Match: COMT1_CLABR (Caffeic acid 3-O-methyltransferase OS=Clarkia breweri GN=COMT PE=1 SV=1)

HSP 1 Score: 174.096 bits (440), Expect = 4.001e-43
Identity = 93/179 (51.96%), Postives = 126/179 (70.39%), Query Frame = 1
Query:   28 DESFAYANQLVTASVLPMTMQAIIGLGVFEIIAKA---GPGAKLPASEIAAQLPATKNKDAPXMLDRMLRLLASHSVVECSIDDADDS--QRLYGLNDVSNYFVPNKDGVSFGPVLALIQDKVFMDSWSQLKEAITEGGVPFDRVHGTHAFEYPGLDPRFNEVFNIAMYNYTNLVIQKI 549
            +E+  +A QL +ASVLPM ++A I L V EI+AK+   G GA +  +EIAAQLP T N DAP MLDR+LRLLAS+SVV CS+ +  D   +RLYGL  V  +   N+DGVS  P+  + QDKV M+SW  LK+AI +GG+PF++ +G  AFEY G DPRFN+VFN  M +++ + ++KI
Sbjct:   19 EEANLFAMQLASASVLPMVLKAAIELDVLEIMAKSIPHGSGAYISPAEIAAQLPTT-NPDAPVMLDRVLRLLASYSVVTCSLRELPDGKVERLYGLAPVCKFLTKNEDGVSLAPLCLMNQDKVLMESWYYLKDAILDGGIPFNKAYGMTAFEYHGTDPRFNKVFNRGMSDHSTITMKKI 196          
BLAST of CX288727 vs. ExPASy Swiss-Prot
Match: COMT2_OCIBA (Caffeic acid 3-O-methyltransferase 2 OS=Ocimum basilicum GN=COMT2 PE=2 SV=1)

HSP 1 Score: 171.785 bits (434), Expect = 1.986e-42
Identity = 87/181 (48.07%), Postives = 124/181 (68.51%), Query Frame = 1
Query:   16 NERRDESFAYANQLVTASVLPMTMQAIIGLGVFEIIAKAGPGAKLPASEIAAQLPATKNKDAPXMLDRMLRLLASHSVVECSIDDADDS--QRLYGLNDVSNYFVPNKDGVSFGPVLALIQDKVFMDSWSQLKEAITEGGVPFDRVHGTHAFEYPGLDPRFNEVFNIAMYNYTNLVIQKIL 552
            N   +E+F +A QL +ASVLPM +++ I L + E+I KAG GA +  +E+AAQL  T N +A  MLDR+LRLL S++++EC +    D   QRLYGL  V  +   N+DGVS  P+  + QDKV M+SW  LK+A+ +GG+PF++ +G  AFEY G DPRFN+VFN  M N++ + ++KIL
Sbjct:   11 NSDEEENFLFAMQLASASVLPMVLKSAIELDLLELIKKAGAGAFVSPAELAAQL-LTTNAEAHVMLDRILRLLTSYAILECRLKTLPDGGVQRLYGLAPVCKFLTKNEDGVSMAPLALMNQDKVLMESWYHLKDAVLDGGIPFNKAYGMTAFEYHGTDPRFNKVFNQGMSNHSTITMKKIL 190          
BLAST of CX288727 vs. ExPASy Swiss-Prot
Match: COMT1_ROSCH (Caffeic acid 3-O-methyltransferase OS=Rosa chinensis GN=COMT1 PE=2 SV=1)

HSP 1 Score: 171.4 bits (433), Expect = 2.593e-42
Identity = 87/177 (49.15%), Postives = 126/177 (71.19%), Query Frame = 1
Query:   28 DESFAYANQLVTASVLPMTMQAIIGLGVFEIIAKAGPGAKLPASEIAAQLPATKNKDAPXMLDRMLRLLASHSVVECSIDDADDS--QRLYGLNDVSNYFVPNKDGVSFGPVLALIQDKVFMDSWSQLKEAITEGGVPFDRVHGTHAFEYPGLDPRFNEVFNIAMYNYTNLVIQKIL 552
            +E+  +A QL +ASVLPM ++A I L + EI+AKAGPGA L  +++A+QLP TKN +AP MLDRMLRLLAS+S++  S+    D   +RLYGL  V  +   N+DGVS   +  + QDKV ++SW  LK+A+ +GG+PF++ +G  AF+Y G DPRFN+VFN  M +++ + ++KIL
Sbjct:   17 EEANLFAMQLASASVLPMVLKAAIELDLLEIMAKAGPGAFLSPNDLASQLP-TKNPEAPVMLDRMLRLLASYSILTYSLRTLPDGKVERLYGLGPVCKFLTKNEDGVSIAALCLMNQDKVLVESWYHLKDAVLDGGIPFNKAYGMTAFDYHGTDPRFNKVFNKGMADHSTITMKKIL 192          
BLAST of CX288727 vs. ExPASy Swiss-Prot
Match: COMT1_ZINEL (Caffeic acid 3-O-methyltransferase OS=Zinnia elegans PE=2 SV=1)

HSP 1 Score: 171.014 bits (432), Expect = 3.387e-42
Identity = 83/183 (45.36%), Postives = 125/183 (68.31%), Query Frame = 1
Query:   10 GANERRDESFAYANQLVTASVLPMTMQAIIGLGVFEIIAKAGPGAKLPASEIAAQLPATKNKDAPXMLDRMLRLLASHSVVECSIDDADD--SQRLYGLNDVSNYFVPNKDGVSFGPVLALIQDKVFMDSWSQLKEAITEGGVPFDRVHGTHAFEYPGLDPRFNEVFNIAMYNYTNLVIQKIL 552
            G+N+  D++F +A QL +ASVLPM ++  I L + E IAKAGP   + +SE+ AQLP   N +AP M+DR+  LLAS+SV+ C++ +  D  ++R YGL  V  + + N  GVS  P+L + QDKV M+SW  LK+ + +GG+PF++ +G  AFEY G D RFN+VFN  M+N++ + ++KI+
Sbjct:    2 GSNQD-DQAFLFAMQLASASVLPMVLKTAIELDLLETIAKAGPHGSVSSSELVAQLPKVNNPEAPVMIDRICSLLASYSVLTCTLKETADGCAERFYGLAPVCKFLIKNDAGVSLAPLLLMNQDKVLMESWYYLKDPVLDGGIPFNKAYGMSAFEYHGKDQRFNKVFNSGMFNHSTMTMKKIV 183          
BLAST of CX288727 vs. ExPASy Swiss-Prot
Match: COMT1_OCIBA (Caffeic acid 3-O-methyltransferase 1 OS=Ocimum basilicum GN=COMT1 PE=2 SV=1)

HSP 1 Score: 170.629 bits (431), Expect = 4.423e-42
Identity = 85/181 (46.96%), Postives = 123/181 (67.96%), Query Frame = 1
Query:   16 NERRDESFAYANQLVTASVLPMTMQAIIGLGVFEIIAKAGPGAKLPASEIAAQLPATKNKDAPXMLDRMLRLLASHSVVECSIDDADDS--QRLYGLNDVSNYFVPNKDGVSFGPVLALIQDKVFMDSWSQLKEAITEGGVPFDRVHGTHAFEYPGLDPRFNEVFNIAMYNYTNLVIQKIL 552
            N   +E+F +A QL +ASVLPM +++ I L + E+I K+G GA +   ++AAQLP T N DA  MLDR+LRLL S++++EC +    D   +RLYGL  V  +   N+DGVS  P+  + QDKV M+SW  L +A+ +GG+PF++ +G  AFEY G DPRFN+VFN  M N++ + ++KIL
Sbjct:   11 NSDEEENFLFAMQLASASVLPMVLKSAIELDLLELIKKSGAGAFVSPVDLAAQLPTT-NPDAHVMLDRILRLLTSYAILECRLKTLPDGGVERLYGLAPVCKFLTKNEDGVSMAPLTLMNQDKVLMESWYHLSDAVVDGGIPFNKAYGMTAFEYHGTDPRFNKVFNQGMSNHSTITMKKIL 190          
BLAST of CX288727 vs. ExPASy Swiss-Prot
Match: OMT1_ARATH (Quercetin 3-O-methyltransferase 1 OS=Arabidopsis thaliana GN=OMT1 PE=1 SV=1)

HSP 1 Score: 164.081 bits (414), Expect = 4.140e-40
Identity = 86/177 (48.59%), Postives = 122/177 (68.93%), Query Frame = 1
Query:   28 DESFAYANQLVTASVLPMTMQAIIGLGVFEIIAKAGPGAKLPASEIAAQLPATKNKDAPXMLDRMLRLLASHSVVECSID--DADDSQRLYGLNDVSNYFVPNKDGVSFGPVLALIQDKVFMDSWSQLKEAITEGGVPFDRVHGTHAFEYPGLDPRFNEVFNIAMYNYTNLVIQKIL 552
            DE+  +A QL +ASVLPM +++ + L + EI+AK G  + +  +EIA++LP TKN +AP MLDR+LRLL S+SV+ CS      D  +R+YGL  V  Y   N+DGVS   +  + QDKV M+SW  LK+AI +GG+PF++ +G  AFEY G DPRFN+VFN  M N++ + ++KIL
Sbjct:   17 DEAALFAMQLASASVLPMALKSALELDLLEIMAKNG--SPMSPTEIASKLP-TKNPEAPVMLDRILRLLTSYSVLTCSNRKLSGDGVERIYGLGPVCKYLTKNEDGVSIAALCLMNQDKVLMESWYHLKDAILDGGIPFNKAYGMSAFEYHGTDPRFNKVFNNGMSNHSTITMKKIL 190          
BLAST of CX288727 vs. ExPASy Swiss-Prot
Match: COMT1_SACOF (Caffeic acid 3-O-methyltransferase OS=Saccharum officinarum GN=COMT PE=2 SV=1)

HSP 1 Score: 160.229 bits (404), Expect = 5.979e-39
Identity = 82/178 (46.07%), Postives = 119/178 (66.85%), Query Frame = 1
Query:   28 DESFAYANQLVTASVLPMTMQAIIGLGVFEII-AKAGPGAKLPASEIAAQLP-ATKNKDAPXMLDRMLRLLASHSVVECSIDDADDS-QRLYGLNDVSNYFVPNKDGVSFGPVLALIQDKVFMDSWSQLKEAITEGGVPFDRVHGTHAFEYPGLDPRFNEVFNIAMYNYTNLVIQKIL 552
            +E+  YA QL +AS+LPMT++  + LG+ E++ A+A  G  L   E+ A+LP A  N DA  M+DRMLRLLAS+ VV+C ++D D   +R Y    V  +  PN+DGVS   +  + QDKV M+SW  LK+A+ +GG+PF++ +G  AFEY G DPRFN VFN  M N++ ++ +K+L
Sbjct:   14 EEACMYAMQLASASILPMTLKNALELGLLEVLQAEAPAGKALAPEEVVARLPVAPTNPDAADMVDRMLRLLASYDVVKCQMEDKDGKYERRYSAAPVGKWLTPNEDGVSMAALTLMNQDKVLMESWYYLKDAVLDGGIPFNKAYGMTAFEYHGTDPRFNRVFNEGMKNHSVIITKKLL 191          
BLAST of CX288727 vs. ExPASy Swiss-Prot
Match: OMT1_CHRAE (Quercetin 3-O-methyltransferase 1 OS=Chrysosplenium americanum GN=OMT1 PE=1 SV=1)

HSP 1 Score: 155.992 bits (393), Expect = 1.127e-37
Identity = 80/169 (47.34%), Postives = 115/169 (68.05%), Query Frame = 1
Query:   43 YANQLVTASVLPMTMQAIIGLGVFEIIAKAGPGAKLPASEIAAQLPATKNKDAPXMLDRMLRLLASHSVVECSIDDADDSQRLYGLNDVSNYFVPNKDGVSFGPVLALIQDKVFMDSWSQLKEAITEGGVPFDRVHGTHAFEYPGLDPRFNEVFNIAMYNYTNLVIQKI 549
            +A QL +ASVLPM +++ I L + EII   G    +  +EIA+ LP T N DAP M+DR+LRLL+ +SVV CS+   DD QR+YGL  V  Y   N+DGVS   +  + QDKV M+SW  LK+A+ +GG+PF++ +G  +FEY G DPRFN+VFN  M +++ + ++K+
Sbjct:    3 FAMQLASASVLPMVLKSAIELDLLEIIR--GQDTCMSPTEIASHLPTT-NPDAPAMVDRILRLLSCYSVVTCSVRSVDD-QRVYGLAPVCKYLTKNQDGVSIAALCLMNQDKVLMESWYHLKDAVLDGGIPFNKAYGMSSFEYHGTDPRFNKVFNRGMSDHSTITMKKV 167          
The following BLAST results are available for this feature:
BLAST of CX288727 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 27
Match NameE-valueIdentityDescription
COMT1_PRUDU1.053e-4350.85Caffeic acid 3-O-methyltransferase OS=Prunus dulci... [more]
COMT1_EUCGU1.053e-4350.28Caffeic acid 3-O-methyltransferase OS=Eucalyptus g... [more]
COMT1_CLABR4.001e-4351.96Caffeic acid 3-O-methyltransferase OS=Clarkia brew... [more]
COMT2_OCIBA1.986e-4248.07Caffeic acid 3-O-methyltransferase 2 OS=Ocimum bas... [more]
COMT1_ROSCH2.593e-4249.15Caffeic acid 3-O-methyltransferase OS=Rosa chinens... [more]
COMT1_ZINEL3.387e-4245.36Caffeic acid 3-O-methyltransferase OS=Zinnia elega... [more]
COMT1_OCIBA4.423e-4246.96Caffeic acid 3-O-methyltransferase 1 OS=Ocimum bas... [more]
OMT1_ARATH4.140e-4048.59Quercetin 3-O-methyltransferase 1 OS=Arabidopsis t... [more]
COMT1_SACOF5.979e-3946.07Caffeic acid 3-O-methyltransferase OS=Saccharum of... [more]
OMT1_CHRAE1.127e-3747.34Quercetin 3-O-methyltransferase 1 OS=Chrysospleniu... [more]

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Properties
Property NameValue
Genbank descriptionC02003G01SK IF1 Citrus clementina cDNA clone C02003G01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX288727 ID=CX288727; Name=CX288727; organism=Citrus clementina; type=EST; length=552bp
TCGGCACGAGGGGCTAATGAAAGGAGAGACGAAAGCTTTGCATATGCCAA
TCAACTGGTGACGGCTTCAGTGCTACCCATGACAATGCAAGCAATAATTG
GGCTGGGAGTTTTTGAGATCATAGCCAAAGCTGGTCCTGGAGCAAAGCTC
CCAGCTTCAGAGATTGCCGCTCAGTTGCCCGCCACCAAGAATAAAGACGC
ACCTATNATGCTGGATCGGATGCTCAGGCTTCTGGCTAGCCATAGTGTTG
TTGAATGCTCAATTGATGATGCTGATGATTCTCAGAGACTATACGGTTTG
AATGACGTTTCCAACTACTTTGTGCCTAATAAAGATGGTGTCTCATTCGG
CCCTGTGTTGGCCTTAATTCAGGACAAGGTCTTTATGGACAGCTGGTCCC
AATTGAAAGAAGCTATTACTGAAGGAGGAGTTCCATTTGATCGAGTACAT
GGAACGCACGCTTTCGAGTATCCGGGATTGGACCCCAGGTTCAATGAAGT
TTTCAACATAGCGATGTACAACTATACCAATTTGGTCATTCAGAAAATCC
TT
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