CX288727

Overview
NameCX288727
Unique NameCX288727
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length552
Libraries
Library NameType
IF1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX288727 vs. ExPASy Swiss-Prot
Match: OMT2_CHRAE (Quercetin 3-O-methyltransferase 2 OS=Chrysosplenium americanum GN=OMT2 PE=1 SV=1)

HSP 1 Score: 155.221 bits (391), Expect = 1.923e-37
Identity = 80/169 (47.34%), Postives = 114/169 (67.46%), Query Frame = 1
Query:   43 YANQLVTASVLPMTMQAIIGLGVFEIIAKAGPGAKLPASEIAAQLPATKNKDAPXMLDRMLRLLASHSVVECSIDDADDSQRLYGLNDVSNYFVPNKDGVSFGPVLALIQDKVFMDSWSQLKEAITEGGVPFDRVHGTHAFEYPGLDPRFNEVFNIAMYNYTNLVIQKI 549
            +A QL  ASVLPM +++ I L + EII   G    +  +EIA+ LP T N DAP M+DR+LRLL+ +SVV CS+   DD QR+YGL  V  Y   N+DGVS   +  + QDKV M+SW  LK+A+ +GG+PF++ +G  +FEY G DPRFN+VFN  M +++ + ++K+
Sbjct:    3 FAMQLACASVLPMVLKSAIELDLLEIIR--GQDTCMSPTEIASHLPTT-NPDAPAMVDRILRLLSCYSVVTCSVRSVDD-QRVYGLAPVCKYLTKNQDGVSIAALCLMNQDKVLMESWYHLKDAVLDGGIPFNKAYGMSSFEYHGTDPRFNKVFNRGMSDHSTITMKKV 167          
BLAST of CX288727 vs. ExPASy Swiss-Prot
Match: IEMT_CLABR ((Iso)eugenol O-methyltransferase OS=Clarkia breweri GN=IEMT1 PE=1 SV=2)

HSP 1 Score: 151.754 bits (382), Expect = 2.126e-36
Identity = 83/178 (46.63%), Postives = 118/178 (66.29%), Query Frame = 1
Query:   28 DESFAYANQLVTASVLPMTMQAIIGLGVFEIIAKA-GPGAKLPASEIAAQLPATKNKDAPXMLDRMLRLLASHSVVECSIDDADDS--QRLYGLNDVSNYFVPNKDGVSFGPVLALIQDKVFMDSWSQLKEAITEGGVPFDRVHGTHAFEYPGLDPRFNEVFNIAMYNYTNLVIQKIL 552
            +E+  +A QL +A+VLPM ++A I L V EI+AK+  P   +  +EIAAQLP T N +AP MLDR+LRLLAS+SVV  ++ +      +RLYGL  V  +   N+DGVS  P L    DKV ++ W  LK+AI EGG+PF++ +G + F+Y G D RFN+VFN  M + + + ++KIL
Sbjct:   19 EEANLFAMQLASAAVLPMALKAAIELDVLEIMAKSVPPSGYISPAEIAAQLPTT-NPEAPVMLDRVLRLLASYSVVTYTLRELPSGKVERLYGLAPVCKFLTKNEDGVSLAPFLLTATDKVLLEPWFYLKDAILEGGIPFNKAYGMNEFDYHGTDHRFNKVFNKGMSSNSTITMKKIL 195          
BLAST of CX288727 vs. ExPASy Swiss-Prot
Match: IMT1_MESCR (Inositol 4-methyltransferase OS=Mesembryanthemum crystallinum GN=IMT1 PE=1 SV=1)

HSP 1 Score: 150.984 bits (380), Expect = 3.627e-36
Identity = 84/178 (47.19%), Postives = 111/178 (62.36%), Query Frame = 1
Query:   25 RDESFA-YANQLVTASVLPMTMQAIIGLGVFEIIAKAGPGAKLPASEIAAQLPATKNKDAPXMLDRMLRLLASHSVVECSIDDADD-SQRLYGLNDVSNYFVPNKDGVSFGPVLALIQDKVFMDSWSQLKEAITEGGVPFDRVHGTHAFEYPGLDPRFNEVFNIAMYNYTNLVIQKIL 552
            +DE  A  A  L  A+  PM +++   L + +I +KAG G  +  SEIA+Q+ A KN +AP +LDRMLRLLASHSV+ C +   +  SQR+YG   + NY   N    S GP+L L  DKV M+SW  L + I EGGVPF R HG   F+Y G D RFN VFN  M ++T LV++K+L
Sbjct:   17 KDEQLAGLAVTLANAAAFPMILKSAFELKILDIFSKAGEGVFVSTSEIASQIGA-KNPNAPVLLDRMLRLLASHSVLTCKLQKGEGGSQRVYGPAPLCNYLASNDGQGSLGPLLVLHHDKVMMESWFHLNDYILEGGVPFKRAHGMIQFDYTGTDERFNHVFNQGMAHHTILVMKKLL 193          
BLAST of CX288727 vs. ExPASy Swiss-Prot
Match: COMT1_MAIZE (Caffeic acid 3-O-methyltransferase OS=Zea mays PE=3 SV=1)

HSP 1 Score: 150.599 bits (379), Expect = 4.737e-36
Identity = 78/180 (43.33%), Postives = 115/180 (63.89%), Query Frame = 1
Query:   28 DESFAYANQLVTASVLPMTMQAIIGLGVFEIIAKAGPGAK--LPASEIAAQLPATKNKDAPX--MLDRMLRLLASHSVVECSIDDADDS-QRLYGLNDVSNYFVPNKDGVSFGPVLALIQDKVFMDSWSQLKEAITEGGVPFDRVHGTHAFEYPGLDPRFNEVFNIAMYNYTNLVIQKIL 552
            +E+  YA QL ++S+LPMT++  I LG+ E++ K   G K  L   E+ A++PA  +  A    M+DRMLRLLAS+ VV C ++D D   +R Y    V  +  PN+DGVS   +  + QDKV M+SW  LK+A+ +GG+PF++ +G  AFEY G D RFN VFN  M N++ ++ +K+L
Sbjct:   14 EEACMYAMQLASSSILPMTLKNAIELGLLEVLQKEAGGGKAALAPEEVVARMPAAPSDPAAAAAMVDRMLRLLASYDVVRCQMEDRDGRYERRYSAAPVCKWLTPNEDGVSMAALALMNQDKVLMESWYYLKDAVLDGGIPFNKAYGMTAFEYHGTDARFNRVFNEGMKNHSVIITKKLL 193          
BLAST of CX288727 vs. ExPASy Swiss-Prot
Match: OMT1_ORYSJ (Quercetin 3-O-methyltransferase 1 OS=Oryza sativa subsp. japonica GN=ROMT-9 PE=1 SV=1)

HSP 1 Score: 150.214 bits (378), Expect = 6.187e-36
Identity = 78/183 (42.62%), Postives = 116/183 (63.39%), Query Frame = 1
Query:   28 DESFAYANQLVTASVLPMTMQAIIGLGVFEIIAKA------GPGAKLPASEIAAQLPATKNKDAPXMLDRMLRLLASHSVVECSIDDADDSQ--RLYGLNDVSNYFVPNKDGVSFGPVLALIQDKVFMDSWSQLKEAITEGGVPFDRVHGTHAFEYPGLDPRFNEVFNIAMYNYTNLVIQKIL 552
            +E+  YA QL ++S+LPMT++  I LG+ E +  A      G  A L  +E+A +LP+  N  A  M+DRMLRLLAS++VV C +++  D +  R Y    V  +  PN+DGVS   +  + QDKV M+SW  LK+A+ +GG+PF++ +G  AFEY G D RFN VFN  M N++ ++ +K+L
Sbjct:   14 EEACMYALQLASSSILPMTLKNAIELGLLETLQSAAVAGGGGKAALLTPAEVADKLPSKANPAAADMVDRMLRLLASYNVVRCEMEEGADGKLSRRYAAAPVCKWLTPNEDGVSMAALALMNQDKVLMESWYYLKDAVLDGGIPFNKAYGMTAFEYHGTDARFNRVFNEGMKNHSVIITKKLL 196          
BLAST of CX288727 vs. ExPASy Swiss-Prot
Match: SMT_COPJA ((S)-scoulerine 9-O-methyltransferase OS=Coptis japonica GN=SMT PE=1 SV=1)

HSP 1 Score: 117.857 bits (294), Expect = 3.403e-26
Identity = 67/149 (44.97%), Postives = 94/149 (63.09%), Query Frame = 1
Query:   73 LPMTMQAIIGLGVFEIIAKAGPGAKLPASEIAAQLPATKNKDAPXMLDRMLRLLASHSVVECSIDDADDSQRLYGLNDVSNYFVPNKDGVSFGPVLALIQDKVFMDSWSQLKEAITEGGV-PFDRVHGTHAFEYPGLDPRFNEVFNIAM 516
            LPM ++A I L VFEII++AGP A+L  S+I A++P TKN  A   LDR+LR+L + S++  S      S R+YGLN+ S   V ++D VS  P+L    DK  ++S+  +K+ + E GV PFDR HG   F+Y G + R N+ FN AM
Sbjct:   51 LPMALRAAIELNVFEIISQAGPDAQLSPSDIVAKIP-TKNPSAAISLDRILRMLGASSILSVS---TTKSGRVYGLNEESRCLVASEDKVSVVPMLLFTSDKAVVESFYNIKDVVLEEGVIPFDRTHGMDFFQYAGKEERVNKSFNQAM 195          
BLAST of CX288727 vs. ExPASy Swiss-Prot
Match: CHOMT_MEDSA (Isoliquiritigenin 2'-O-methyltransferase OS=Medicago sativa PE=1 SV=1)

HSP 1 Score: 106.301 bits (264), Expect = 1.025e-22
Identity = 66/185 (35.68%), Postives = 102/185 (55.14%), Query Frame = 1
Query:   13 ANERRDESFAYANQLVTASVLPMTMQAIIGLGVFEIIAKAGP-GAKLPASEIAAQLPA-TKNKDAPXMLDRMLRLLASHSVVECSIDDADD--SQRLYGLNDVSNYFVPNKDGVSFGPVLALIQDKVFMDSWSQLKEAITEGGVP-FDRVHGTHAFEYPGLDPRFNEVFNIAMYNYTNLVIQKIL 552
            + +  D +   A  L T  V P  + A I L +FEIIAKA P GA +  SEIA++LPA T++ D P  LDRMLRLLAS+SV+  +    +D  ++R+YGL+ V  Y VP++           +     +  W   KEA+ +  +  F  VHG   +E+ G D + N++FN +M +     ++++L
Sbjct:   17 SEQTEDSACLSAMVLTTNLVYPAVLNAAIDLNLFEIIAKATPPGAFMSPSEIASKLPASTQHSDLPNRLDRMLRLLASYSVLTSTTRTIEDGGAERVYGLSMVGKYLVPDESRGYLASFTTFLCYPALLQVWMNFKEAVVDEDIDLFKNVHGVTKYEFMGKDKKMNQIFNKSMVDVCATEMKRML 201          
The following BLAST results are available for this feature:
BLAST of CX288727 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 27
Match NameE-valueIdentityDescription
OMT2_CHRAE1.923e-3747.34Quercetin 3-O-methyltransferase 2 OS=Chrysospleniu... [more]
IEMT_CLABR2.126e-3646.63(Iso)eugenol O-methyltransferase OS=Clarkia brewer... [more]
IMT1_MESCR3.627e-3647.19Inositol 4-methyltransferase OS=Mesembryanthemum c... [more]
COMT1_MAIZE4.737e-3643.33Caffeic acid 3-O-methyltransferase OS=Zea mays PE=... [more]
OMT1_ORYSJ6.187e-3642.62Quercetin 3-O-methyltransferase 1 OS=Oryza sativa ... [more]
SMT_COPJA3.403e-2644.97(S)-scoulerine 9-O-methyltransferase OS=Coptis jap... [more]
CHOMT_MEDSA1.025e-2235.68Isoliquiritigenin 2'-O-methyltransferase OS=Medica... [more]

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Properties
Property NameValue
Genbank descriptionC02003G01SK IF1 Citrus clementina cDNA clone C02003G01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX288727 ID=CX288727; Name=CX288727; organism=Citrus clementina; type=EST; length=552bp
TCGGCACGAGGGGCTAATGAAAGGAGAGACGAAAGCTTTGCATATGCCAA
TCAACTGGTGACGGCTTCAGTGCTACCCATGACAATGCAAGCAATAATTG
GGCTGGGAGTTTTTGAGATCATAGCCAAAGCTGGTCCTGGAGCAAAGCTC
CCAGCTTCAGAGATTGCCGCTCAGTTGCCCGCCACCAAGAATAAAGACGC
ACCTATNATGCTGGATCGGATGCTCAGGCTTCTGGCTAGCCATAGTGTTG
TTGAATGCTCAATTGATGATGCTGATGATTCTCAGAGACTATACGGTTTG
AATGACGTTTCCAACTACTTTGTGCCTAATAAAGATGGTGTCTCATTCGG
CCCTGTGTTGGCCTTAATTCAGGACAAGGTCTTTATGGACAGCTGGTCCC
AATTGAAAGAAGCTATTACTGAAGGAGGAGTTCCATTTGATCGAGTACAT
GGAACGCACGCTTTCGAGTATCCGGGATTGGACCCCAGGTTCAATGAAGT
TTTCAACATAGCGATGTACAACTATACCAATTTGGTCATTCAGAAAATCC
TT
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