CX288733

Overview
NameCX288733
Unique NameCX288733
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length160
Libraries
Library NameType
IF1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX288733 vs. ExPASy Swiss-Prot
Match: HSP72_PICAN (Heat shock protein 70 2 OS=Pichia angusta GN=HSA2 PE=3 SV=2)

HSP 1 Score: 101.679 bits (252), Expect = 1.240e-21
Identity = 47/53 (88.68%), Postives = 50/53 (94.34%), Query Frame = 1
Query:    1 KEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQITV 159
            K ++FSTYSDNQPGVLIQVYEGER RT+DNNLLGKFELSGIPPAPRGVPQI V
Sbjct:  422 KSEIFSTYSDNQPGVLIQVYEGERARTKDNNLLGKFELSGIPPAPRGVPQIEV 474          
BLAST of CX288733 vs. ExPASy Swiss-Prot
Match: HSP74_YEAST (Heat shock protein SSA4 OS=Saccharomyces cerevisiae GN=SSA4 PE=1 SV=3)

HSP 1 Score: 101.293 bits (251), Expect = 1.620e-21
Identity = 47/53 (88.68%), Postives = 51/53 (96.23%), Query Frame = 1
Query:    1 KEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQITV 159
            K +VFSTY+DNQPGVLIQV+EGERTRT+DNNLLGKFELSGIPPAPRGVPQI V
Sbjct:  422 KSEVFSTYADNQPGVLIQVFEGERTRTKDNNLLGKFELSGIPPAPRGVPQIEV 474          
BLAST of CX288733 vs. ExPASy Swiss-Prot
Match: HSP71_PUCGR (Heat shock protein HSS1 OS=Puccinia graminis GN=HSS1 PE=3 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 2.763e-21
Identity = 46/53 (86.79%), Postives = 50/53 (94.34%), Query Frame = 1
Query:    1 KEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQITV 159
            K ++FSTYSDNQPGVLIQVYEGER RT+DNNLLGKFEL+GIPPAPRGVPQI V
Sbjct:  422 KSEIFSTYSDNQPGVLIQVYEGERARTKDNNLLGKFELAGIPPAPRGVPQIEV 474          
BLAST of CX288733 vs. ExPASy Swiss-Prot
Match: HSP71_PICAN (Heat shock protein 70 1 OS=Pichia angusta GN=HSA1 PE=1 SV=2)

HSP 1 Score: 100.523 bits (249), Expect = 2.763e-21
Identity = 46/53 (86.79%), Postives = 50/53 (94.34%), Query Frame = 1
Query:    1 KEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQITV 159
            K ++FSTYSDNQPGVLIQVYEGER +T+DNNLLGKFELSGIPPAPRGVPQI V
Sbjct:  424 KSEIFSTYSDNQPGVLIQVYEGERAKTKDNNLLGKFELSGIPPAPRGVPQIEV 476          
BLAST of CX288733 vs. ExPASy Swiss-Prot
Match: HSP73_YEAST (Heat shock protein SSA3 OS=Saccharomyces cerevisiae GN=SSA3 PE=1 SV=3)

HSP 1 Score: 99.7525 bits (247), Expect = 4.714e-21
Identity = 46/53 (86.79%), Postives = 50/53 (94.34%), Query Frame = 1
Query:    1 KEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQITV 159
            K + FSTY+DNQPGVLIQV+EGERTRT+DNNLLGKFELSGIPPAPRGVPQI V
Sbjct:  422 KSETFSTYADNQPGVLIQVFEGERTRTKDNNLLGKFELSGIPPAPRGVPQIDV 474          
BLAST of CX288733 vs. ExPASy Swiss-Prot
Match: HSP70_EMENI (Heat shock 70 kDa protein OS=Emericella nidulans GN=hsp70 PE=1 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 6.156e-21
Identity = 46/53 (86.79%), Postives = 49/53 (92.45%), Query Frame = 1
Query:    1 KEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQITV 159
            K + FSTYSDNQPGVLIQVYEGER RT+DNNLLGKFEL+GIPPAPRGVPQI V
Sbjct:  422 KSETFSTYSDNQPGVLIQVYEGERARTKDNNLLGKFELTGIPPAPRGVPQIEV 474          
BLAST of CX288733 vs. ExPASy Swiss-Prot
Match: HSP72_USTMA (Heat shock 70 kDa protein 2 OS=Ustilago maydis GN=UMS2 PE=3 SV=2)

HSP 1 Score: 98.9821 bits (245), Expect = 8.040e-21
Identity = 45/53 (84.91%), Postives = 50/53 (94.34%), Query Frame = 1
Query:    1 KEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQITV 159
            K ++FSTY+DNQPGVLIQV+EGER RT+DNNLLGKFELSGIPPAPRGVPQI V
Sbjct:  422 KSEIFSTYADNQPGVLIQVFEGERARTKDNNLLGKFELSGIPPAPRGVPQIEV 474          
BLAST of CX288733 vs. ExPASy Swiss-Prot
Match: HSP70_NEUCR (Heat shock 70 kDa protein OS=Neurospora crassa GN=hsps-1 PE=2 SV=2)

HSP 1 Score: 98.9821 bits (245), Expect = 8.040e-21
Identity = 46/53 (86.79%), Postives = 50/53 (94.34%), Query Frame = 1
Query:    1 KEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQITV 159
            K +VFST+SDNQPGVLIQVYEGER RT+DNNLLGKFEL+GIPPAPRGVPQI V
Sbjct:  423 KSEVFSTFSDNQPGVLIQVYEGERQRTKDNNLLGKFELTGIPPAPRGVPQIEV 475          
BLAST of CX288733 vs. ExPASy Swiss-Prot
Match: HSP70_PYRSA (Heat shock 70 kDa protein OS=Pyrenomonas salina GN=HSP70 PE=3 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 1.050e-20
Identity = 45/53 (84.91%), Postives = 51/53 (96.23%), Query Frame = 1
Query:    1 KEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQITV 159
            K QVFSTY+DNQPGVLIQV+EGER+RT+DNN+LGKFEL+GIPPAPRGVPQI V
Sbjct:  430 KTQVFSTYADNQPGVLIQVFEGERSRTKDNNILGKFELTGIPPAPRGVPQIEV 482          
BLAST of CX288733 vs. ExPASy Swiss-Prot
Match: HS7C1_DICDI (Heat shock cognate 70 kDa protein 1 OS=Dictyostelium discoideum GN=hspB PE=1 SV=2)

HSP 1 Score: 98.5969 bits (244), Expect = 1.050e-20
Identity = 46/53 (86.79%), Postives = 48/53 (90.57%), Query Frame = 1
Query:    1 KEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQITV 159
            K Q FSTYSDNQPGVLIQVYEGER  T+DNNLLGKFELSGIPPAPRGVPQ+ V
Sbjct:  422 KTQTFSTYSDNQPGVLIQVYEGERAMTKDNNLLGKFELSGIPPAPRGVPQVEV 474          
The following BLAST results are available for this feature:
BLAST of CX288733 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
HSP72_PICAN1.240e-2188.68Heat shock protein 70 2 OS=Pichia angusta GN=HSA2 ... [more]
HSP74_YEAST1.620e-2188.68Heat shock protein SSA4 OS=Saccharomyces cerevisia... [more]
HSP71_PUCGR2.763e-2186.79Heat shock protein HSS1 OS=Puccinia graminis GN=HS... [more]
HSP71_PICAN2.763e-2186.79Heat shock protein 70 1 OS=Pichia angusta GN=HSA1 ... [more]
HSP73_YEAST4.714e-2186.79Heat shock protein SSA3 OS=Saccharomyces cerevisia... [more]
HSP70_EMENI6.156e-2186.79Heat shock 70 kDa protein OS=Emericella nidulans G... [more]
HSP72_USTMA8.040e-2184.91Heat shock 70 kDa protein 2 OS=Ustilago maydis GN=... [more]
HSP70_NEUCR8.040e-2186.79Heat shock 70 kDa protein OS=Neurospora crassa GN=... [more]
HSP70_PYRSA1.050e-2084.91Heat shock 70 kDa protein OS=Pyrenomonas salina GN... [more]
HS7C1_DICDI1.050e-2086.79Heat shock cognate 70 kDa protein 1 OS=Dictyosteli... [more]

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Properties
Property NameValue
Genbank descriptionC02003G09SK IF1 Citrus clementina cDNA clone C02003G09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX288733 ID=CX288733; Name=CX288733; organism=Citrus clementina; type=EST; length=160bp
AAGGAACAAGTTTTCTCCACCTACTCAGACAACCAACCCGGTGTCCTGAT
CCAGGTGTACGAGGGTGAAAGGACAAGAACCAGGGACAATAACTTGTTGG
GCAAATTTGAGCTCTCTGGCATTCCTCCAGCTCCCAGGGGGGTTCCTCAG
ATCACTGTTT
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