CX288733

Overview
NameCX288733
Unique NameCX288733
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length160
Libraries
Library NameType
IF1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX288733 vs. ExPASy Swiss-Prot
Match: HSP72_YEAST (Heat shock protein SSA2 OS=Saccharomyces cerevisiae GN=SSA2 PE=1 SV=3)

HSP 1 Score: 98.2117 bits (243), Expect = 1.371e-20
Identity = 45/53 (84.91%), Postives = 50/53 (94.34%), Query Frame = 1
Query:    1 KEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQITV 159
            K +VFSTY+DNQPGVLIQV+EGER +T+DNNLLGKFELSGIPPAPRGVPQI V
Sbjct:  421 KSEVFSTYADNQPGVLIQVFEGERAKTKDNNLLGKFELSGIPPAPRGVPQIEV 473          
BLAST of CX288733 vs. ExPASy Swiss-Prot
Match: HSP71_YEAST (Heat shock protein SSA1 OS=Saccharomyces cerevisiae GN=SSA1 PE=1 SV=4)

HSP 1 Score: 97.8265 bits (242), Expect = 1.791e-20
Identity = 44/53 (83.02%), Postives = 50/53 (94.34%), Query Frame = 1
Query:    1 KEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQITV 159
            K ++FSTY+DNQPGVLIQV+EGER +T+DNNLLGKFELSGIPPAPRGVPQI V
Sbjct:  421 KSEIFSTYADNQPGVLIQVFEGERAKTKDNNLLGKFELSGIPPAPRGVPQIEV 473          
BLAST of CX288733 vs. ExPASy Swiss-Prot
Match: HSP70_PENCI (Heat shock 70 kDa protein (Fragment) OS=Penicillium citrinum GN=HSP70 PE=1 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 1.791e-20
Identity = 45/53 (84.91%), Postives = 49/53 (92.45%), Query Frame = 1
Query:    1 KEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQITV 159
            K + FSTYSDNQPGVLIQV+EGER RT+DNNLLGKFEL+GIPPAPRGVPQI V
Sbjct:  292 KSETFSTYSDNQPGVLIQVFEGERARTKDNNLLGKFELTGIPPAPRGVPQIEV 344          
BLAST of CX288733 vs. ExPASy Swiss-Prot
Match: HSP71_CANFA (Heat shock 70 kDa protein 1 OS=Canis familiaris GN=HSPA1 PE=2 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 2.339e-20
Identity = 45/51 (88.24%), Postives = 48/51 (94.12%), Query Frame = 1
Query:    7 QVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQITV 159
            Q+F+TYSDNQPGVLIQVYEGER  TRDNNLLG+FELSGIPPAPRGVPQI V
Sbjct:  426 QIFTTYSDNQPGVLIQVYEGERAMTRDNNLLGRFELSGIPPAPRGVPQIEV 476          
BLAST of CX288733 vs. ExPASy Swiss-Prot
Match: HS71B_PIG (Heat shock 70 kDa protein 1B OS=Sus scrofa GN=HSPA1B PE=2 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 2.339e-20
Identity = 45/51 (88.24%), Postives = 48/51 (94.12%), Query Frame = 1
Query:    7 QVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQITV 159
            Q+F+TYSDNQPGVLIQVYEGER  TRDNNLLG+FELSGIPPAPRGVPQI V
Sbjct:  426 QIFTTYSDNQPGVLIQVYEGERAMTRDNNLLGRFELSGIPPAPRGVPQIEV 476          
BLAST of CX288733 vs. ExPASy Swiss-Prot
Match: HS71B_BOVIN (Heat shock 70 kDa protein 1B OS=Bos taurus GN=HSPA1B PE=2 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 2.339e-20
Identity = 45/51 (88.24%), Postives = 48/51 (94.12%), Query Frame = 1
Query:    7 QVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQITV 159
            Q+F+TYSDNQPGVLIQVYEGER  TRDNNLLG+FELSGIPPAPRGVPQI V
Sbjct:  426 QIFTTYSDNQPGVLIQVYEGERAMTRDNNLLGRFELSGIPPAPRGVPQIEV 476          
BLAST of CX288733 vs. ExPASy Swiss-Prot
Match: HS71B_BOSMU (Heat shock 70 kDa protein 1B OS=Bos mutus grunniens GN=HSPA1B PE=2 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 2.339e-20
Identity = 45/51 (88.24%), Postives = 48/51 (94.12%), Query Frame = 1
Query:    7 QVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQITV 159
            Q+F+TYSDNQPGVLIQVYEGER  TRDNNLLG+FELSGIPPAPRGVPQI V
Sbjct:  426 QIFTTYSDNQPGVLIQVYEGERAMTRDNNLLGRFELSGIPPAPRGVPQIEV 476          
BLAST of CX288733 vs. ExPASy Swiss-Prot
Match: HS71A_PIG (Heat shock 70 kDa protein 1A OS=Sus scrofa GN=HSPA1A PE=3 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 2.339e-20
Identity = 45/51 (88.24%), Postives = 48/51 (94.12%), Query Frame = 1
Query:    7 QVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQITV 159
            Q+F+TYSDNQPGVLIQVYEGER  TRDNNLLG+FELSGIPPAPRGVPQI V
Sbjct:  426 QIFTTYSDNQPGVLIQVYEGERAMTRDNNLLGRFELSGIPPAPRGVPQIEV 476          
BLAST of CX288733 vs. ExPASy Swiss-Prot
Match: HS71A_BOVIN (Heat shock 70 kDa protein 1A OS=Bos taurus GN=HSPA1A PE=2 SV=2)

HSP 1 Score: 97.4413 bits (241), Expect = 2.339e-20
Identity = 45/51 (88.24%), Postives = 48/51 (94.12%), Query Frame = 1
Query:    7 QVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQITV 159
            Q+F+TYSDNQPGVLIQVYEGER  TRDNNLLG+FELSGIPPAPRGVPQI V
Sbjct:  426 QIFTTYSDNQPGVLIQVYEGERAMTRDNNLLGRFELSGIPPAPRGVPQIEV 476          
BLAST of CX288733 vs. ExPASy Swiss-Prot
Match: HSP70_DAUCA (Heat shock 70 kDa protein OS=Daucus carota GN=HSP70 PE=3 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 3.055e-20
Identity = 48/57 (84.21%), Postives = 50/57 (87.72%), Query Frame = 1
Query:    1 KEQVFSTYSDNQPGVLIQVYEGERTRTRDN----NLLGKFELSGIPPAPRGVPQITV 159
            KEQ+FSTYSDNQPGVLIQVYEGER RTRDN     LLGKFEL+GIPPAPRGVPQI V
Sbjct:  428 KEQIFSTYSDNQPGVLIQVYEGERARTRDNKLLGKLLGKFELTGIPPAPRGVPQINV 484          
The following BLAST results are available for this feature:
BLAST of CX288733 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
HSP72_YEAST1.371e-2084.91Heat shock protein SSA2 OS=Saccharomyces cerevisia... [more]
HSP71_YEAST1.791e-2083.02Heat shock protein SSA1 OS=Saccharomyces cerevisia... [more]
HSP70_PENCI1.791e-2084.91Heat shock 70 kDa protein (Fragment) OS=Penicilliu... [more]
HSP71_CANFA2.339e-2088.24Heat shock 70 kDa protein 1 OS=Canis familiaris GN... [more]
HS71B_PIG2.339e-2088.24Heat shock 70 kDa protein 1B OS=Sus scrofa GN=HSPA... [more]
HS71B_BOVIN2.339e-2088.24Heat shock 70 kDa protein 1B OS=Bos taurus GN=HSPA... [more]
HS71B_BOSMU2.339e-2088.24Heat shock 70 kDa protein 1B OS=Bos mutus grunnien... [more]
HS71A_PIG2.339e-2088.24Heat shock 70 kDa protein 1A OS=Sus scrofa GN=HSPA... [more]
HS71A_BOVIN2.339e-2088.24Heat shock 70 kDa protein 1A OS=Bos taurus GN=HSPA... [more]
HSP70_DAUCA3.055e-2084.21Heat shock 70 kDa protein OS=Daucus carota GN=HSP7... [more]

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Properties
Property NameValue
Genbank descriptionC02003G09SK IF1 Citrus clementina cDNA clone C02003G09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX288733 ID=CX288733; Name=CX288733; organism=Citrus clementina; type=EST; length=160bp
AAGGAACAAGTTTTCTCCACCTACTCAGACAACCAACCCGGTGTCCTGAT
CCAGGTGTACGAGGGTGAAAGGACAAGAACCAGGGACAATAACTTGTTGG
GCAAATTTGAGCTCTCTGGCATTCCTCCAGCTCCCAGGGGGGTTCCTCAG
ATCACTGTTT
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