CX288733

Overview
NameCX288733
Unique NameCX288733
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length160
Libraries
Library NameType
IF1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX288733 vs. ExPASy Swiss-Prot
Match: DNAK_CHLCV (Chaperone protein dnaK OS=Chlamydophila caviae GN=dnaK PE=2 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 1.520e-11
Identity = 31/53 (58.49%), Postives = 40/53 (75.47%), Query Frame = 1
Query:    1 KEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQITV 159
            K+Q+FST +DNQP V I V +GER   +DN  +G+F+L+ IPPAPRG PQI V
Sbjct:  420 KKQIFSTAADNQPAVTIVVLQGERPMAKDNKEIGRFDLTDIPPAPRGHPQIEV 472          
BLAST of CX288733 vs. ExPASy Swiss-Prot
Match: DNAK_CHLAB (Chaperone protein dnaK OS=Chlamydophila abortus GN=dnaK PE=2 SV=2)

HSP 1 Score: 68.1662 bits (165), Expect = 1.520e-11
Identity = 31/53 (58.49%), Postives = 40/53 (75.47%), Query Frame = 1
Query:    1 KEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQITV 159
            K+Q+FST +DNQP V I V +GER   +DN  +G+F+L+ IPPAPRG PQI V
Sbjct:  420 KKQIFSTAADNQPAVTIVVLQGERPMAKDNKEIGRFDLTDIPPAPRGHPQIEV 472          
BLAST of CX288733 vs. ExPASy Swiss-Prot
Match: DNAK_BACSU (Chaperone protein dnaK OS=Bacillus subtilis GN=dnaK PE=1 SV=3)

HSP 1 Score: 68.1662 bits (165), Expect = 1.520e-11
Identity = 33/53 (62.26%), Postives = 39/53 (73.58%), Query Frame = 1
Query:    1 KEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQITV 159
            K QVFST +DNQ  V I V +GER  + DN  LG+F+L+ IPPAPRGVPQI V
Sbjct:  392 KSQVFSTAADNQTAVDIHVLQGERPMSADNKTLGRFQLTDIPPAPRGVPQIEV 444          
BLAST of CX288733 vs. ExPASy Swiss-Prot
Match: DNAK_BACA2 (Chaperone protein dnaK OS=Bacillus amyloliquefaciens (strain FZB42) GN=dnaK PE=2 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 1.520e-11
Identity = 33/53 (62.26%), Postives = 39/53 (73.58%), Query Frame = 1
Query:    1 KEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQITV 159
            K QVFST +DNQ  V I V +GER  + DN  LG+F+L+ IPPAPRGVPQI V
Sbjct:  392 KSQVFSTAADNQTAVDIHVLQGERPMSADNKTLGRFQLTDIPPAPRGVPQIEV 444          
BLAST of CX288733 vs. ExPASy Swiss-Prot
Match: DNAK_TETHA (Chaperone protein dnaK OS=Tetragenococcus halophilus GN=dnaK PE=2 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 1.985e-11
Identity = 33/53 (62.26%), Postives = 38/53 (71.70%), Query Frame = 1
Query:    1 KEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQITV 159
            K QVFST +DNQP V I V +GER    DN  LG+F+L+ IP APRGVPQI V
Sbjct:  393 KSQVFSTAADNQPAVDIHVLQGERPMAADNKTLGRFQLTDIPAAPRGVPQIEV 445          
BLAST of CX288733 vs. ExPASy Swiss-Prot
Match: DNAK_STRTD (Chaperone protein dnaK OS=Streptococcus thermophilus (strain ATCC BAA-491 / LMD-9) GN=dnaK PE=2 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 1.985e-11
Identity = 33/53 (62.26%), Postives = 38/53 (71.70%), Query Frame = 1
Query:    1 KEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQITV 159
            K QVFST +DNQP V I V +GER    DN  LG+F+L+ IP APRGVPQI V
Sbjct:  392 KSQVFSTAADNQPAVDIHVLQGERPMAADNKTLGRFQLTDIPAAPRGVPQIEV 444          
BLAST of CX288733 vs. ExPASy Swiss-Prot
Match: DNAK_STRT2 (Chaperone protein dnaK OS=Streptococcus thermophilus (strain ATCC BAA-250 / LMG 18311) GN=dnaK PE=2 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 1.985e-11
Identity = 33/53 (62.26%), Postives = 38/53 (71.70%), Query Frame = 1
Query:    1 KEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQITV 159
            K QVFST +DNQP V I V +GER    DN  LG+F+L+ IP APRGVPQI V
Sbjct:  392 KSQVFSTAADNQPAVDIHVLQGERPMAADNKTLGRFQLTDIPAAPRGVPQIEV 444          
BLAST of CX288733 vs. ExPASy Swiss-Prot
Match: DNAK_STRT1 (Chaperone protein dnaK OS=Streptococcus thermophilus (strain CNRZ 1066) GN=dnaK PE=2 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 1.985e-11
Identity = 33/53 (62.26%), Postives = 38/53 (71.70%), Query Frame = 1
Query:    1 KEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQITV 159
            K QVFST +DNQP V I V +GER    DN  LG+F+L+ IP APRGVPQI V
Sbjct:  392 KSQVFSTAADNQPAVDIHVLQGERPMAADNKTLGRFQLTDIPAAPRGVPQIEV 444          
BLAST of CX288733 vs. ExPASy Swiss-Prot
Match: DNAK_STRMU (Chaperone protein dnaK OS=Streptococcus mutans GN=dnaK PE=2 SV=2)

HSP 1 Score: 67.781 bits (164), Expect = 1.985e-11
Identity = 33/53 (62.26%), Postives = 38/53 (71.70%), Query Frame = 1
Query:    1 KEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQITV 159
            K QVFST +DNQP V I V +GER    DN  LG+F+L+ IP APRGVPQI V
Sbjct:  392 KSQVFSTAADNQPAVDIHVLQGERPMAADNKTLGRFQLTDIPAAPRGVPQIEV 444          
BLAST of CX288733 vs. ExPASy Swiss-Prot
Match: DNAK_ROSDO (Chaperone protein dnaK OS=Roseobacter denitrificans (strain ATCC 33942 / OCh 114) GN=dnaK PE=2 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 1.985e-11
Identity = 31/53 (58.49%), Postives = 37/53 (69.81%), Query Frame = 1
Query:    1 KEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQITV 159
            K Q+FST  DNQ  V I+V++GER    DN +LG F L  IPPAPRG+PQI V
Sbjct:  417 KSQIFSTAEDNQNAVTIRVFQGEREMAADNKILGAFNLENIPPAPRGMPQIEV 469          
The following BLAST results are available for this feature:
BLAST of CX288733 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
DNAK_CHLCV1.520e-1158.49Chaperone protein dnaK OS=Chlamydophila caviae GN=... [more]
DNAK_CHLAB1.520e-1158.49Chaperone protein dnaK OS=Chlamydophila abortus GN... [more]
DNAK_BACSU1.520e-1162.26Chaperone protein dnaK OS=Bacillus subtilis GN=dna... [more]
DNAK_BACA21.520e-1162.26Chaperone protein dnaK OS=Bacillus amyloliquefacie... [more]
DNAK_TETHA1.985e-1162.26Chaperone protein dnaK OS=Tetragenococcus halophil... [more]
DNAK_STRTD1.985e-1162.26Chaperone protein dnaK OS=Streptococcus thermophil... [more]
DNAK_STRT21.985e-1162.26Chaperone protein dnaK OS=Streptococcus thermophil... [more]
DNAK_STRT11.985e-1162.26Chaperone protein dnaK OS=Streptococcus thermophil... [more]
DNAK_STRMU1.985e-1162.26Chaperone protein dnaK OS=Streptococcus mutans GN=... [more]
DNAK_ROSDO1.985e-1158.49Chaperone protein dnaK OS=Roseobacter denitrifican... [more]

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Properties
Property NameValue
Genbank descriptionC02003G09SK IF1 Citrus clementina cDNA clone C02003G09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX288733 ID=CX288733; Name=CX288733; organism=Citrus clementina; type=EST; length=160bp
AAGGAACAAGTTTTCTCCACCTACTCAGACAACCAACCCGGTGTCCTGAT
CCAGGTGTACGAGGGTGAAAGGACAAGAACCAGGGACAATAACTTGTTGG
GCAAATTTGAGCTCTCTGGCATTCCTCCAGCTCCCAGGGGGGTTCCTCAG
ATCACTGTTT
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