CX288733

Overview
NameCX288733
Unique NameCX288733
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length160
Libraries
Library NameType
IF1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CX288733 vs. ExPASy Swiss-Prot
Match: DNAK_STRS2 (Chaperone protein dnaK OS=Streptococcus suis (strain 98HAH33) GN=dnaK PE=2 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 2.592e-11
Identity = 32/53 (60.38%), Postives = 38/53 (71.70%), Query Frame = 1 
Query:    1 KEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQITV 159
            K QVFST +DNQP V I V +GER    DN  LG+F+L+ IP APRG+PQI V
Sbjct:  392 KSQVFSTAADNQPAVDIHVLQGERPMAADNKTLGRFQLTDIPAAPRGIPQIEV 444
[Close]
BLAST of CX288733 vs. ExPASy Swiss-Prot
Match: DNAK_STRR6 (Chaperone protein dnaK OS=Streptococcus pneumoniae (strain ATCC BAA-255 / R6) GN=dnaK PE=2 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 2.592e-11
Identity = 32/53 (60.38%), Postives = 38/53 (71.70%), Query Frame = 1 
Query:    1 KEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQITV 159
            K QVFST +DNQP V I V +GER    DN  LG+F+L+ IP APRG+PQI V
Sbjct:  392 KSQVFSTAADNQPAVDIHVLQGERPMAADNKTLGRFQLTDIPAAPRGIPQIEV 444
[Close]
BLAST of CX288733 vs. ExPASy Swiss-Prot
Match: DNAK_STRPZ (Chaperone protein dnaK OS=Streptococcus pyogenes serotype M49 (strain NZ131) GN=dnaK PE=2 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 2.592e-11
Identity = 32/53 (60.38%), Postives = 38/53 (71.70%), Query Frame = 1 
Query:    1 KEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQITV 159
            K QVFST +DNQP V I V +GER    DN  LG+F+L+ IP APRG+PQI V
Sbjct:  392 KSQVFSTAADNQPAVDIHVLQGERPMAADNKTLGRFQLTDIPAAPRGIPQIEV 444
[Close]
BLAST of CX288733 vs. ExPASy Swiss-Prot
Match: DNAK_STRPY (Chaperone protein dnaK OS=Streptococcus pyogenes GN=dnaK PE=2 SV=2)

HSP 1 Score: 67.3958 bits (163), Expect = 2.592e-11
Identity = 32/53 (60.38%), Postives = 38/53 (71.70%), Query Frame = 1 
Query:    1 KEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQITV 159
            K QVFST +DNQP V I V +GER    DN  LG+F+L+ IP APRG+PQI V
Sbjct:  392 KSQVFSTAADNQPAVDIHVLQGERPMAADNKTLGRFQLTDIPAAPRGIPQIEV 444
[Close]
BLAST of CX288733 vs. ExPASy Swiss-Prot
Match: DNAK_STRPS (Chaperone protein dnaK OS=Streptococcus pneumoniae (strain CGSP14) GN=dnaK PE=2 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 2.592e-11
Identity = 32/53 (60.38%), Postives = 38/53 (71.70%), Query Frame = 1 
Query:    1 KEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQITV 159
            K QVFST +DNQP V I V +GER    DN  LG+F+L+ IP APRG+PQI V
Sbjct:  392 KSQVFSTAADNQPAVDIHVLQGERPMAADNKTLGRFQLTDIPAAPRGIPQIEV 444
[Close]
BLAST of CX288733 vs. ExPASy Swiss-Prot
Match: DNAK_STRPN (Chaperone protein dnaK OS=Streptococcus pneumoniae GN=dnaK PE=2 SV=2)

HSP 1 Score: 67.3958 bits (163), Expect = 2.592e-11
Identity = 32/53 (60.38%), Postives = 38/53 (71.70%), Query Frame = 1 
Query:    1 KEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQITV 159
            K QVFST +DNQP V I V +GER    DN  LG+F+L+ IP APRG+PQI V
Sbjct:  392 KSQVFSTAADNQPAVDIHVLQGERPMAADNKTLGRFQLTDIPAAPRGIPQIEV 444
[Close]
BLAST of CX288733 vs. ExPASy Swiss-Prot
Match: DNAK_STRPM (Chaperone protein dnaK OS=Streptococcus pyogenes serotype M28 GN=dnaK PE=2 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 2.592e-11
Identity = 32/53 (60.38%), Postives = 38/53 (71.70%), Query Frame = 1 
Query:    1 KEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQITV 159
            K QVFST +DNQP V I V +GER    DN  LG+F+L+ IP APRG+PQI V
Sbjct:  392 KSQVFSTAADNQPAVDIHVLQGERPMAADNKTLGRFQLTDIPAAPRGIPQIEV 444
[Close]
BLAST of CX288733 vs. ExPASy Swiss-Prot
Match: DNAK_STRPJ (Chaperone protein dnaK OS=Streptococcus pneumoniae (strain ATCC 700669 / Spain 23F-1) GN=dnaK PE=2 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 2.592e-11
Identity = 32/53 (60.38%), Postives = 38/53 (71.70%), Query Frame = 1 
Query:    1 KEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQITV 159
            K QVFST +DNQP V I V +GER    DN  LG+F+L+ IP APRG+PQI V
Sbjct:  392 KSQVFSTAADNQPAVDIHVLQGERPMAADNKTLGRFQLTDIPAAPRGIPQIEV 444
[Close]
BLAST of CX288733 vs. ExPASy Swiss-Prot
Match: DNAK_STRPI (Chaperone protein dnaK OS=Streptococcus pneumoniae (strain Hungary19A-6) GN=dnaK PE=2 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 2.592e-11
Identity = 32/53 (60.38%), Postives = 38/53 (71.70%), Query Frame = 1 
Query:    1 KEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQITV 159
            K QVFST +DNQP V I V +GER    DN  LG+F+L+ IP APRG+PQI V
Sbjct:  392 KSQVFSTAADNQPAVDIHVLQGERPMAADNKTLGRFQLTDIPAAPRGIPQIEV 444
[Close]
BLAST of CX288733 vs. ExPASy Swiss-Prot
Match: DNAK_STRPG (Chaperone protein dnaK OS=Streptococcus pyogenes serotype M5 (strain Manfredo) GN=dnaK PE=2 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 2.592e-11
Identity = 32/53 (60.38%), Postives = 38/53 (71.70%), Query Frame = 1 
Query:    1 KEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQITV 159
            K QVFST +DNQP V I V +GER    DN  LG+F+L+ IP APRG+PQI V
Sbjct:  392 KSQVFSTAADNQPAVDIHVLQGERPMAADNKTLGRFQLTDIPAAPRGIPQIEV 444
The following BLAST results are available for this feature:
BLAST of CX288733 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
DNAK_STRS22.592e-1160.38Chaperone protein dnaK OS=Streptococcus suis (stra... [more]
DNAK_STRR62.592e-1160.38Chaperone protein dnaK OS=Streptococcus pneumoniae... [more]
DNAK_STRPZ2.592e-1160.38Chaperone protein dnaK OS=Streptococcus pyogenes s... [more]
DNAK_STRPY2.592e-1160.38Chaperone protein dnaK OS=Streptococcus pyogenes G... [more]
DNAK_STRPS2.592e-1160.38Chaperone protein dnaK OS=Streptococcus pneumoniae... [more]
DNAK_STRPN2.592e-1160.38Chaperone protein dnaK OS=Streptococcus pneumoniae... [more]
DNAK_STRPM2.592e-1160.38Chaperone protein dnaK OS=Streptococcus pyogenes s... [more]
DNAK_STRPJ2.592e-1160.38Chaperone protein dnaK OS=Streptococcus pneumoniae... [more]
DNAK_STRPI2.592e-1160.38Chaperone protein dnaK OS=Streptococcus pneumoniae... [more]
DNAK_STRPG2.592e-1160.38Chaperone protein dnaK OS=Streptococcus pyogenes s... [more]

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Properties
Property NameValue
Genbank descriptionC02003G09SK IF1 Citrus clementina cDNA clone C02003G09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX288733 ID=CX288733; Name=CX288733; organism=Citrus clementina; type=EST; length=160bp
AAGGAACAAGTTTTCTCCACCTACTCAGACAACCAACCCGGTGTCCTGAT
CCAGGTGTACGAGGGTGAAAGGACAAGAACCAGGGACAATAACTTGTTGG
GCAAATTTGAGCTCTCTGGCATTCCTCCAGCTCCCAGGGGGGTTCCTCAG
ATCACTGTTT
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