CX288733

Overview
NameCX288733
Unique NameCX288733
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length160
Libraries
Library NameType
IF1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX288733 vs. ExPASy Swiss-Prot
Match: DNAK_STRP1 (Chaperone protein dnaK OS=Streptococcus pyogenes serotype M1 GN=dnaK PE=2 SV=2)

HSP 1 Score: 67.3958 bits (163), Expect = 2.592e-11
Identity = 32/53 (60.38%), Postives = 38/53 (71.70%), Query Frame = 1
Query:    1 KEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQITV 159
            K QVFST +DNQP V I V +GER    DN  LG+F+L+ IP APRG+PQI V
Sbjct:  392 KSQVFSTAADNQPAVDIHVLQGERPMAADNKTLGRFQLTDIPAAPRGIPQIEV 444          
BLAST of CX288733 vs. ExPASy Swiss-Prot
Match: DNAK_STRGC (Chaperone protein dnaK OS=Streptococcus gordonii (strain Challis / ATCC 35105 / CH1 / DL1 / V288) GN=dnaK PE=2 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 2.592e-11
Identity = 32/53 (60.38%), Postives = 38/53 (71.70%), Query Frame = 1
Query:    1 KEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQITV 159
            K QVFST +DNQP V I V +GER    DN  LG+F+L+ IP APRG+PQI V
Sbjct:  392 KSQVFSTAADNQPAVDIHVLQGERPMAADNKTLGRFQLTDIPAAPRGIPQIEV 444          
BLAST of CX288733 vs. ExPASy Swiss-Prot
Match: DNAK_STRE4 (Chaperone protein dnaK OS=Streptococcus equi subsp. equi (strain 4047) GN=dnaK PE=2 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 2.592e-11
Identity = 32/53 (60.38%), Postives = 38/53 (71.70%), Query Frame = 1
Query:    1 KEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQITV 159
            K QVFST +DNQP V I V +GER    DN  LG+F+L+ IP APRG+PQI V
Sbjct:  392 KSQVFSTAADNQPAVDIHVLQGERPMAADNKTLGRFQLTDIPAAPRGIPQIEV 444          
BLAST of CX288733 vs. ExPASy Swiss-Prot
Match: DNAK_STRAG (Chaperone protein dnaK OS=Streptococcus agalactiae GN=dnaK PE=2 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 2.592e-11
Identity = 32/53 (60.38%), Postives = 38/53 (71.70%), Query Frame = 1
Query:    1 KEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQITV 159
            K QVFST +DNQP V I V +GER    DN  LG+F+L+ IP APRG+PQI V
Sbjct:  392 KSQVFSTAADNQPAVDIHVLQGERPMAADNKTLGRFQLTDIPAAPRGIPQIEV 444          
BLAST of CX288733 vs. ExPASy Swiss-Prot
Match: DNAK_STRA5 (Chaperone protein dnaK OS=Streptococcus agalactiae serotype V GN=dnaK PE=2 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 2.592e-11
Identity = 32/53 (60.38%), Postives = 38/53 (71.70%), Query Frame = 1
Query:    1 KEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQITV 159
            K QVFST +DNQP V I V +GER    DN  LG+F+L+ IP APRG+PQI V
Sbjct:  392 KSQVFSTAADNQPAVDIHVLQGERPMAADNKTLGRFQLTDIPAAPRGIPQIEV 444          
BLAST of CX288733 vs. ExPASy Swiss-Prot
Match: DNAK_STRA3 (Chaperone protein dnaK OS=Streptococcus agalactiae serotype III GN=dnaK PE=2 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 2.592e-11
Identity = 32/53 (60.38%), Postives = 38/53 (71.70%), Query Frame = 1
Query:    1 KEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQITV 159
            K QVFST +DNQP V I V +GER    DN  LG+F+L+ IP APRG+PQI V
Sbjct:  392 KSQVFSTAADNQPAVDIHVLQGERPMAADNKTLGRFQLTDIPAAPRGIPQIEV 444          
BLAST of CX288733 vs. ExPASy Swiss-Prot
Match: DNAK_STRA1 (Chaperone protein dnaK OS=Streptococcus agalactiae serotype Ia GN=dnaK PE=2 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 2.592e-11
Identity = 32/53 (60.38%), Postives = 38/53 (71.70%), Query Frame = 1
Query:    1 KEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQITV 159
            K QVFST +DNQP V I V +GER    DN  LG+F+L+ IP APRG+PQI V
Sbjct:  392 KSQVFSTAADNQPAVDIHVLQGERPMAADNKTLGRFQLTDIPAAPRGIPQIEV 444          
BLAST of CX288733 vs. ExPASy Swiss-Prot
Match: DNAK_RALEH (Chaperone protein dnaK OS=Ralstonia eutropha (strain ATCC 17699 / H16 / DSM 428 / Stanier 337) GN=dnaK PE=2 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 2.592e-11
Identity = 32/51 (62.75%), Postives = 36/51 (70.59%), Query Frame = 1
Query:    7 QVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQITV 159
            QVFST  DNQP V I+V++GER     N LLG+F L GIPPA RG PQI V
Sbjct:  425 QVFSTADDNQPAVTIKVFQGEREMASGNKLLGEFNLEGIPPAARGTPQIEV 475          
BLAST of CX288733 vs. ExPASy Swiss-Prot
Match: DNAK_PSEPW (Chaperone protein dnaK OS=Pseudomonas putida (strain W619) GN=dnaK PE=2 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 2.592e-11
Identity = 33/53 (62.26%), Postives = 37/53 (69.81%), Query Frame = 1
Query:    1 KEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQITV 159
            K QVFST  DNQ  V I V +GER +   N  LGKF+L+ IPPAPRGVPQI V
Sbjct:  422 KSQVFSTADDNQGAVTIHVLQGERKQASQNKSLGKFDLADIPPAPRGVPQIEV 474          
BLAST of CX288733 vs. ExPASy Swiss-Prot
Match: DNAK_PSEPG (Chaperone protein dnaK OS=Pseudomonas putida (strain GB-1) GN=dnaK PE=2 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 2.592e-11
Identity = 33/53 (62.26%), Postives = 37/53 (69.81%), Query Frame = 1
Query:    1 KEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQITV 159
            K QVFST  DNQ  V I V +GER +   N  LGKF+L+ IPPAPRGVPQI V
Sbjct:  422 KSQVFSTADDNQGAVTIHVLQGERKQAAQNKSLGKFDLADIPPAPRGVPQIEV 474          
The following BLAST results are available for this feature:
BLAST of CX288733 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
DNAK_STRP12.592e-1160.38Chaperone protein dnaK OS=Streptococcus pyogenes s... [more]
DNAK_STRGC2.592e-1160.38Chaperone protein dnaK OS=Streptococcus gordonii (... [more]
DNAK_STRE42.592e-1160.38Chaperone protein dnaK OS=Streptococcus equi subsp... [more]
DNAK_STRAG2.592e-1160.38Chaperone protein dnaK OS=Streptococcus agalactiae... [more]
DNAK_STRA52.592e-1160.38Chaperone protein dnaK OS=Streptococcus agalactiae... [more]
DNAK_STRA32.592e-1160.38Chaperone protein dnaK OS=Streptococcus agalactiae... [more]
DNAK_STRA12.592e-1160.38Chaperone protein dnaK OS=Streptococcus agalactiae... [more]
DNAK_RALEH2.592e-1162.75Chaperone protein dnaK OS=Ralstonia eutropha (stra... [more]
DNAK_PSEPW2.592e-1162.26Chaperone protein dnaK OS=Pseudomonas putida (stra... [more]
DNAK_PSEPG2.592e-1162.26Chaperone protein dnaK OS=Pseudomonas putida (stra... [more]

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Properties
Property NameValue
Genbank descriptionC02003G09SK IF1 Citrus clementina cDNA clone C02003G09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX288733 ID=CX288733; Name=CX288733; organism=Citrus clementina; type=EST; length=160bp
AAGGAACAAGTTTTCTCCACCTACTCAGACAACCAACCCGGTGTCCTGAT
CCAGGTGTACGAGGGTGAAAGGACAAGAACCAGGGACAATAACTTGTTGG
GCAAATTTGAGCTCTCTGGCATTCCTCCAGCTCCCAGGGGGGTTCCTCAG
ATCACTGTTT
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