CX288733

Overview
NameCX288733
Unique NameCX288733
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length160
Libraries
Library NameType
IF1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX288733 vs. ExPASy Swiss-Prot
Match: GRP78_NEUCR (78 kDa glucose-regulated protein homolog OS=Neurospora crassa GN=grp78 PE=3 SV=3)

HSP 1 Score: 91.6633 bits (226), Expect = 1.284e-18
Identity = 43/53 (81.13%), Postives = 48/53 (90.57%), Query Frame = 1
Query:    1 KEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQITV 159
            K Q+FST +DNQP VLIQVYEGER+ T+DNNLLGKFEL+GIPPAPRGVPQI V
Sbjct:  456 KSQIFSTAADNQPVVLIQVYEGERSMTKDNNLLGKFELTGIPPAPRGVPQIEV 508          
BLAST of CX288733 vs. ExPASy Swiss-Prot
Match: GRP78_ASPNG (78 kDa glucose-regulated protein homolog OS=Aspergillus niger GN=bipA PE=2 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 1.284e-18
Identity = 43/53 (81.13%), Postives = 48/53 (90.57%), Query Frame = 1
Query:    1 KEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQITV 159
            K Q+FST +DNQP VLIQVYEGER+ T+DNNLLGKFEL+GIPPAPRGVPQI V
Sbjct:  466 KSQIFSTAADNQPTVLIQVYEGERSLTKDNNLLGKFELTGIPPAPRGVPQIEV 518          
BLAST of CX288733 vs. ExPASy Swiss-Prot
Match: GRP78_ASPKA (78 kDa glucose-regulated protein homolog OS=Aspergillus kawachi GN=bipA PE=3 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 1.284e-18
Identity = 43/53 (81.13%), Postives = 48/53 (90.57%), Query Frame = 1
Query:    1 KEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQITV 159
            K Q+FST +DNQP VLIQVYEGER+ T+DNNLLGKFEL+GIPPAPRGVPQI V
Sbjct:  466 KSQIFSTAADNQPTVLIQVYEGERSLTKDNNLLGKFELTGIPPAPRGVPQIEV 518          
BLAST of CX288733 vs. ExPASy Swiss-Prot
Match: GRP78_ASPAW (78 kDa glucose-regulated protein homolog OS=Aspergillus awamori GN=bipA PE=2 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 1.284e-18
Identity = 43/53 (81.13%), Postives = 48/53 (90.57%), Query Frame = 1
Query:    1 KEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQITV 159
            K Q+FST +DNQP VLIQVYEGER+ T+DNNLLGKFEL+GIPPAPRGVPQI V
Sbjct:  466 KSQIFSTAADNQPTVLIQVYEGERSLTKDNNLLGKFELTGIPPAPRGVPQIEV 518          
BLAST of CX288733 vs. ExPASy Swiss-Prot
Match: HSP70_PLAFA (Heat shock 70 kDa protein OS=Plasmodium falciparum PE=2 SV=2)

HSP 1 Score: 91.2781 bits (225), Expect = 1.677e-18
Identity = 42/53 (79.25%), Postives = 46/53 (86.79%), Query Frame = 1
Query:    1 KEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQITV 159
            K Q+F+TY+DNQPGVLIQVYEGER  T+DNNLLGKF L GIPPAPR VPQI V
Sbjct:  437 KSQIFTTYADNQPGVLIQVYEGERALTKDNNLLGKFHLDGIPPAPRKVPQIEV 489          
BLAST of CX288733 vs. ExPASy Swiss-Prot
Match: HSP70_PLACB (Heat shock 70 kDa protein OS=Plasmodium cynomolgi (strain Berok) PE=2 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 1.677e-18
Identity = 42/53 (79.25%), Postives = 46/53 (86.79%), Query Frame = 1
Query:    1 KEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQITV 159
            K Q+F+TY+DNQPGVLIQVYEGER  T+DNNLLGKF L GIPPAPR VPQI V
Sbjct:  437 KSQIFTTYADNQPGVLIQVYEGERALTKDNNLLGKFHLDGIPPAPRKVPQIEV 489          
BLAST of CX288733 vs. ExPASy Swiss-Prot
Match: HSP7A_DROME (Heat shock 70 kDa protein cognate 1 OS=Drosophila melanogaster GN=Hsc70-1 PE=1 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 2.190e-18
Identity = 41/51 (80.39%), Postives = 46/51 (90.20%), Query Frame = 1
Query:    7 QVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQITV 159
            Q+F+TY+DNQPGVLIQV+EGER  TRDNN LGKFELS IPPAPRGVPQ+ V
Sbjct:  426 QIFTTYADNQPGVLIQVFEGERAMTRDNNSLGKFELSAIPPAPRGVPQVEV 476          
BLAST of CX288733 vs. ExPASy Swiss-Prot
Match: HSP74_ANOAL (Heat shock protein 70 B2 OS=Anopheles albimanus GN=HSP70B2 PE=3 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 2.190e-18
Identity = 41/51 (80.39%), Postives = 47/51 (92.16%), Query Frame = 1
Query:    7 QVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQITV 159
            Q+FSTY+DNQPGV IQV+EGER  T+DNNLLG+F+LSGIPPAPRGVPQI V
Sbjct:  425 QIFSTYADNQPGVSIQVFEGERAMTKDNNLLGQFDLSGIPPAPRGVPQIEV 475          
BLAST of CX288733 vs. ExPASy Swiss-Prot
Match: HSP71_CERAE (Heat shock 70 kDa protein 1 OS=Cercopithecus aethiops GN=HSPA1 PE=2 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 4.878e-18
Identity = 43/51 (84.31%), Postives = 47/51 (92.16%), Query Frame = 1
Query:    7 QVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQITV 159
            Q+F+TYSDNQPGVLIQVYEGER  T+DNNLLG+FELSGIPPAP GVPQI V
Sbjct:  424 QIFTTYSDNQPGVLIQVYEGERAMTKDNNLLGRFELSGIPPAP-GVPQIEV 473          
BLAST of CX288733 vs. ExPASy Swiss-Prot
Match: HSP70_CLAHE (Heat shock 70 kDa protein OS=Cladosporium herbarum GN=HSP70 PE=1 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 4.878e-18
Identity = 42/53 (79.25%), Postives = 47/53 (88.68%), Query Frame = 1
Query:    1 KEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQITV 159
            K + FST+SDNQPGVLIQV+EGER RT+D NL+GKFELSGI PAPRGVPQI V
Sbjct:  423 KSETFSTFSDNQPGVLIQVFEGERARTKDINLMGKFELSGIRPAPRGVPQIEV 475          
The following BLAST results are available for this feature:
BLAST of CX288733 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
GRP78_NEUCR1.284e-1881.1378 kDa glucose-regulated protein homolog OS=Neuros... [more]
GRP78_ASPNG1.284e-1881.1378 kDa glucose-regulated protein homolog OS=Asperg... [more]
GRP78_ASPKA1.284e-1881.1378 kDa glucose-regulated protein homolog OS=Asperg... [more]
GRP78_ASPAW1.284e-1881.1378 kDa glucose-regulated protein homolog OS=Asperg... [more]
HSP70_PLAFA1.677e-1879.25Heat shock 70 kDa protein OS=Plasmodium falciparum... [more]
HSP70_PLACB1.677e-1879.25Heat shock 70 kDa protein OS=Plasmodium cynomolgi ... [more]
HSP7A_DROME2.190e-1880.39Heat shock 70 kDa protein cognate 1 OS=Drosophila ... [more]
HSP74_ANOAL2.190e-1880.39Heat shock protein 70 B2 OS=Anopheles albimanus GN... [more]
HSP71_CERAE4.878e-1884.31Heat shock 70 kDa protein 1 OS=Cercopithecus aethi... [more]
HSP70_CLAHE4.878e-1879.25Heat shock 70 kDa protein OS=Cladosporium herbarum... [more]

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Properties
Property NameValue
Genbank descriptionC02003G09SK IF1 Citrus clementina cDNA clone C02003G09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX288733 ID=CX288733; Name=CX288733; organism=Citrus clementina; type=EST; length=160bp
AAGGAACAAGTTTTCTCCACCTACTCAGACAACCAACCCGGTGTCCTGAT
CCAGGTGTACGAGGGTGAAAGGACAAGAACCAGGGACAATAACTTGTTGG
GCAAATTTGAGCTCTCTGGCATTCCTCCAGCTCCCAGGGGGGTTCCTCAG
ATCACTGTTT
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