CX288733

Overview
NameCX288733
Unique NameCX288733
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length160
Libraries
Library NameType
IF1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX288733 vs. ExPASy Swiss-Prot
Match: HSP74_TRYBB (Heat shock 70 kDa protein 4 OS=Trypanosoma brucei brucei PE=2 SV=2)

HSP 1 Score: 89.3521 bits (220), Expect = 6.371e-18
Identity = 42/53 (79.25%), Postives = 47/53 (88.68%), Query Frame = 1
Query:    1 KEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQITV 159
            K Q+FSTYSDNQPGV IQV+EGERT T+D +LLG F+LSGIPPAPRGVPQI V
Sbjct:  427 KSQIFSTYSDNQPGVHIQVFEGERTMTKDCHLLGTFDLSGIPPAPRGVPQIEV 479          
BLAST of CX288733 vs. ExPASy Swiss-Prot
Match: HSP72_ANOAL (Heat shock protein 70 A2 OS=Anopheles albimanus GN=HSP70A2 PE=3 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 6.371e-18
Identity = 40/51 (78.43%), Postives = 47/51 (92.16%), Query Frame = 1
Query:    7 QVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQITV 159
            ++FSTY+DNQPGV IQV+EGER  T+DNNLLG+F+LSGIPPAPRGVPQI V
Sbjct:  425 KIFSTYADNQPGVSIQVFEGERAMTKDNNLLGQFDLSGIPPAPRGVPQIEV 475          
BLAST of CX288733 vs. ExPASy Swiss-Prot
Match: HSP71_ANOAL (Heat shock protein 70 A1 OS=Anopheles albimanus GN=HSP70A1 PE=3 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 6.371e-18
Identity = 40/51 (78.43%), Postives = 47/51 (92.16%), Query Frame = 1
Query:    7 QVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQITV 159
            ++FSTY+DNQPGV IQV+EGER  T+DNNLLG+F+LSGIPPAPRGVPQI V
Sbjct:  425 KIFSTYADNQPGVSIQVFEGERAMTKDNNLLGQFDLSGIPPAPRGVPQIEV 475          
BLAST of CX288733 vs. ExPASy Swiss-Prot
Match: GRP78_PICAN (78 kDa glucose-regulated protein homolog OS=Pichia angusta GN=BiP PE=3 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 6.371e-18
Identity = 42/53 (79.25%), Postives = 46/53 (86.79%), Query Frame = 1
Query:    1 KEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQITV 159
            K Q+FST +DNQP VLIQVYEGER   +DNNLLGKFEL+GIPPAPRGVPQI V
Sbjct:  457 KSQIFSTAADNQPVVLIQVYEGERAMAKDNNLLGKFELTGIPPAPRGVPQIEV 509          
BLAST of CX288733 vs. ExPASy Swiss-Prot
Match: HSP70_HYDMA (Heat shock 70 kDa protein OS=Hydra magnipapillata GN=HSP70.1 PE=3 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 8.320e-18
Identity = 43/51 (84.31%), Postives = 46/51 (90.20%), Query Frame = 1
Query:    7 QVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQITV 159
            QVF+TYSDNQPGVLIQV+EGER+ T  NNLLGKFELSGIP APRGVPQI V
Sbjct:  433 QVFTTYSDNQPGVLIQVFEGERSMTAHNNLLGKFELSGIPLAPRGVPQIEV 483          
BLAST of CX288733 vs. ExPASy Swiss-Prot
Match: HSP70_CERCA (Heat shock protein 70 OS=Ceratitis capitata PE=2 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 8.320e-18
Identity = 42/51 (82.35%), Postives = 44/51 (86.27%), Query Frame = 1
Query:    7 QVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQITV 159
            Q FSTYSDNQPGV IQVYEGER  T+DNN LG F+LSGIPPAPRGVPQI V
Sbjct:  423 QTFSTYSDNQPGVNIQVYEGERVMTKDNNRLGTFDLSGIPPAPRGVPQIEV 473          
BLAST of CX288733 vs. ExPASy Swiss-Prot
Match: HSP75_DROME (Major heat shock 70 kDa protein Bc OS=Drosophila melanogaster GN=Hsp70Bc PE=2 SV=2)

HSP 1 Score: 88.1965 bits (217), Expect = 1.419e-17
Identity = 41/51 (80.39%), Postives = 44/51 (86.27%), Query Frame = 1
Query:    7 QVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQITV 159
            + FSTYSDNQPGV IQVYEGER  T+DNN LG F+LSGIPPAPRGVPQI V
Sbjct:  424 KTFSTYSDNQPGVSIQVYEGERAMTKDNNALGTFDLSGIPPAPRGVPQIEV 474          
BLAST of CX288733 vs. ExPASy Swiss-Prot
Match: HSP74_DROME (Major heat shock 70 kDa protein Bbb OS=Drosophila melanogaster GN=Hsp70Bbb PE=2 SV=2)

HSP 1 Score: 88.1965 bits (217), Expect = 1.419e-17
Identity = 41/51 (80.39%), Postives = 44/51 (86.27%), Query Frame = 1
Query:    7 QVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQITV 159
            + FSTYSDNQPGV IQVYEGER  T+DNN LG F+LSGIPPAPRGVPQI V
Sbjct:  424 KTFSTYSDNQPGVSIQVYEGERAMTKDNNALGTFDLSGIPPAPRGVPQIEV 474          
BLAST of CX288733 vs. ExPASy Swiss-Prot
Match: HSP73_DROME (Major heat shock 70 kDa protein Bb OS=Drosophila melanogaster GN=Hsp70Bb PE=2 SV=2)

HSP 1 Score: 88.1965 bits (217), Expect = 1.419e-17
Identity = 41/51 (80.39%), Postives = 44/51 (86.27%), Query Frame = 1
Query:    7 QVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQITV 159
            + FSTYSDNQPGV IQVYEGER  T+DNN LG F+LSGIPPAPRGVPQI V
Sbjct:  424 KTFSTYSDNQPGVSIQVYEGERAMTKDNNALGTFDLSGIPPAPRGVPQIEV 474          
BLAST of CX288733 vs. ExPASy Swiss-Prot
Match: HSP72_RAT (Heat shock-related 70 kDa protein 2 OS=Rattus norvegicus GN=Hspa2 PE=2 SV=2)

HSP 1 Score: 88.1965 bits (217), Expect = 1.419e-17
Identity = 40/51 (78.43%), Postives = 45/51 (88.24%), Query Frame = 1
Query:    7 QVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQITV 159
            Q F+TYSDNQ  VL+QVYEGER  T+DNNLLGKF+L+GIPPAPRGVPQI V
Sbjct:  429 QTFTTYSDNQSSVLVQVYEGERAMTKDNNLLGKFDLTGIPPAPRGVPQIEV 479          
The following BLAST results are available for this feature:
BLAST of CX288733 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
HSP74_TRYBB6.371e-1879.25Heat shock 70 kDa protein 4 OS=Trypanosoma brucei ... [more]
HSP72_ANOAL6.371e-1878.43Heat shock protein 70 A2 OS=Anopheles albimanus GN... [more]
HSP71_ANOAL6.371e-1878.43Heat shock protein 70 A1 OS=Anopheles albimanus GN... [more]
GRP78_PICAN6.371e-1879.2578 kDa glucose-regulated protein homolog OS=Pichia... [more]
HSP70_HYDMA8.320e-1884.31Heat shock 70 kDa protein OS=Hydra magnipapillata ... [more]
HSP70_CERCA8.320e-1882.35Heat shock protein 70 OS=Ceratitis capitata PE=2 S... [more]
HSP75_DROME1.419e-1780.39Major heat shock 70 kDa protein Bc OS=Drosophila m... [more]
HSP74_DROME1.419e-1780.39Major heat shock 70 kDa protein Bbb OS=Drosophila ... [more]
HSP73_DROME1.419e-1780.39Major heat shock 70 kDa protein Bb OS=Drosophila m... [more]
HSP72_RAT1.419e-1778.43Heat shock-related 70 kDa protein 2 OS=Rattus norv... [more]

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Properties
Property NameValue
Genbank descriptionC02003G09SK IF1 Citrus clementina cDNA clone C02003G09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX288733 ID=CX288733; Name=CX288733; organism=Citrus clementina; type=EST; length=160bp
AAGGAACAAGTTTTCTCCACCTACTCAGACAACCAACCCGGTGTCCTGAT
CCAGGTGTACGAGGGTGAAAGGACAAGAACCAGGGACAATAACTTGTTGG
GCAAATTTGAGCTCTCTGGCATTCCTCCAGCTCCCAGGGGGGTTCCTCAG
ATCACTGTTT
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