CX288820
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX288820 vs. ExPASy Swiss-Prot
Match: RCA1_YEAST (Mitochondrial respiratory chain complexes assembly protein RCA1 OS=Saccharomyces cerevisiae GN=RCA1 PE=1 SV=2) HSP 1 Score: 201.83 bits (512), Expect = 1.629e-51 Identity = 98/174 (56.32%), Postives = 132/174 (75.86%), Query Frame = 2 Query: 2 FQVYLKKIKLDHEPSYYSQRLAALTPGFAGADIANVCNEAALIAARGENSQVTMEHFEAAIDRVIGGLEKKNKVISKLERRTVAYHESGHAVAGWFLEHAEPLLKVTIVPRGTAALGFAQYVPNENLLLTKEQLFDMTCMTLGGRAAEQVLLGKISTGAQNDLEKVTKMTYAQV 523 F V+L +KL E RLAALTPGF+GADIANVCNEAALIAAR + V + HFE AI+RVIGG+E+K+K++S E++ VAYHE+GHAV GW+L++A+PLLKV+I+PRG ALG+AQY+P + LLT++QL D M+LGGR +E++ +++GA +D +KVT M A V Sbjct: 528 FAVHLHHLKLAGEIFDLKNRLAALTPGFSGADIANVCNEAALIAARSDEDAVKLNHFEQAIERVIGGVERKSKLLSPEEKKVVAYHEAGHAVCGWYLKYADPLLKVSIIPRGQGALGYAQYLPGDIFLLTEQQLKDRMTMSLGGRVSEELHFPSVTSGASDDFKKVTSMATAMV 701
BLAST of CX288820 vs. ExPASy Swiss-Prot
Match: AFG3_YEAST (Mitochondrial respiratory chain complexes assembly protein AFG3 OS=Saccharomyces cerevisiae GN=AFG3 PE=1 SV=1) HSP 1 Score: 195.667 bits (496), Expect = 1.167e-49 Identity = 96/178 (53.93%), Postives = 132/178 (74.16%), Query Frame = 2 Query: 2 FQVYLKKIKLD----HEPSYYSQRLAALTPGFAGADIANVCNEAALIAARGENSQVTMEHFEAAIDRVIGGLEKKNKVISKLERRTVAYHESGHAVAGWFLEHAEPLLKVTIVPRGTAALGFAQYVPNENLLLTKEQLFDMTCMTLGGRAAEQVLLGKISTGAQNDLEKVTKMTYAQV 523 + V+LK++ LD + + S +LA LTPGF GADIAN CNEAALIAAR + +T+ HFE AI+RVI GLEKK +V+SK E+R+VAYHE+GHAV GWFL++A+PLLKV+I+PRG ALG+AQY+P + L+++EQ M LGGR +E++ +++GA +D +KVT+M A V Sbjct: 469 YLVHLKRLNLDPLLTDDMNNLSGKLATLTPGFTGADIANACNEAALIAARHNDPYITIHHFEQAIERVIAGLEKKTRVLSKEEKRSVAYHEAGHAVCGWFLKYADPLLKVSIIPRGQGALGYAQYLPPDQYLISEEQFRHRMIMALGGRVSEELHFPSVTSGAHDDFKKVTQMANAMV 646
BLAST of CX288820 vs. ExPASy Swiss-Prot
Match: RCA1_SCHPO (Mitochondrial respiratory chain complexes assembly protein rca1 OS=Schizosaccharomyces pombe GN=SPBC543.09 PE=2 SV=1) HSP 1 Score: 186.037 bits (471), Expect = 9.250e-47 Identity = 93/176 (52.84%), Postives = 127/176 (72.16%), Query Frame = 2 Query: 2 FQVYLKKIKLDHEPSYYSQRLAALTPGFAGADIANVCNEAALIAARGENSQVTMEHFEAAIDRVIGGLEKKNKVISKLERRTVAYHESGHAVAGWFLEHAEPLLKVTIVPRGTAALGFAQYVPNENLLLTKEQLFDMTCMTLGGRAAEQVLLG--KISTGAQNDLEKVTKMTYAQV 523 F+V+LK IK ++RLA LT GF GADI NVCNE ALIAAR +++V M HFE AI+RV GLEKK++V+S E+ TVA+HE+GHAVAGWF+E+ +PLLKV+I+PR ALG+A Y+P + L+++ Q+ D M L GR +E++ G KI++GA +D +KVT+M A V Sbjct: 476 FKVHLKHIKAADNIDLIAKRLAVLTSGFTGADIMNVCNEGALIAARSNSNEVQMVHFEQAIERVTAGLEKKSRVLSPEEKNTVAHHEAGHAVAGWFMEYVDPLLKVSIIPR-AQALGYASYLPKDQYLMSRGQILDQMGMALAGRVSEEIFFGPEKITSGASDDFQKVTRMAQAYV 650
BLAST of CX288820 vs. ExPASy Swiss-Prot
Match: FTSH3_SYNY3 (Cell division protease ftsH homolog 3 OS=Synechocystis sp. (strain PCC 6803) GN=sll1463 PE=3 SV=1) HSP 1 Score: 158.688 bits (400), Expect = 1.581e-38 Identity = 83/174 (47.70%), Postives = 115/174 (66.09%), Query Frame = 2 Query: 5 QVYLKKIKLDHEPSYYSQRLAALTPGFAGADIANVCNEAALIAARGENSQVTMEHFEAAIDRVIGGLEKKNKVISKLERRTVAYHESGHAVAGWFLEHAEPLLKVTIVPRGTAALGFAQYVPNEN-LLLTKEQLFDMTCMTLGGRAAEQVLLGKISTGAQNDLEKVTKMTYAQV 523 ++Y KKIKLD E + +A TPGFAGAD+AN+ NEAAL+AAR + VT F AI+RV+ GLEKK++V+S E++ VAYHE GHA+ G + + K++IVPRG AALG+ +P E+ LL + +L D LGGRAAE+++ I+TGA NDL++ T + V Sbjct: 356 EIYAKKIKLDKEVEL--KNIATRTPGFAGADLANLVNEAALLAARNKQDSVTEADFREAIERVVAGLEKKSRVLSDKEKKIVAYHEVGHALVGAVMPGGGQVAKISIVPRGMAALGYTLQMPTEDRFLLNESELRDQIATLLGGRAAEEIVFDSITTGAANDLQRATDLAEQMV 527
BLAST of CX288820 vs. ExPASy Swiss-Prot
Match: SPG7_RAT (Paraplegin OS=Rattus norvegicus GN=Spg7 PE=2 SV=1) HSP 1 Score: 149.443 bits (376), Expect = 9.594e-36 Identity = 77/174 (44.25%), Postives = 104/174 (59.77%), Query Frame = 2 Query: 2 FQVYLKKIKLDHEPSYYSQRLAALTPGFAGADIANVCNEAALIAARGENSQVTMEHFEAAIDRVIGGLEKKNKVISKLERRTVAYHESGHAVAGWFLEHAEPLLKVTIVPRGTAALGFAQYVPNENLLLTKEQLFDMTCMTLGGRAAEQVLLGKISTGAQNDLEKVTKMTYAQV 523 F+ +LK +KL S+YSQRLA LTPGF+G KK+K++SK E+R VA+HESGHA+ GW LEH E ++KV+I PR AALGF+Q +P + L TKEQLF+ CM LGGRAAE + ++++GAQ+DL KVT++ Y+ V Sbjct: 489 FEQHLKGLKLTQPSSFYSQRLAELTPGFSGT-------------------------------------AKKSKILSKEEQRVVAFHESGHALVGWLLEHTEAVMKVSIAPRTNAALGFSQMLPRDQYLFTKEQLFERMCMALGGRAAEAISFSRVTSGAQDDLRKVTRIAYSMV 625
BLAST of CX288820 vs. ExPASy Swiss-Prot
Match: FTSH_HELPJ (Cell division protease ftsH homolog OS=Helicobacter pylori J99 GN=ftsH PE=3 SV=1) HSP 1 Score: 148.288 bits (373), Expect = 2.137e-35 Identity = 81/175 (46.29%), Postives = 115/175 (65.71%), Query Frame = 2 Query: 5 QVYLKKIKLDHEPSYYSQRLAALTPGFAGADIANVCNEAALIAARGENSQVTMEHFEAAIDRVIGGLEKKNKVISKLERRTVAYHESGHAVAGWFLEHAEPLLKVTIVPRGTAALGFAQYVPNEN-LLLTKEQLFDMTCMTLGGRAAEQVLLGKISTGAQNDLEKVTKMTYAQVA 526 +V++K +KL ++ + Q +A LT G AGAD+AN+ NEAAL+A R +V +H + A++R I GLEKK++ IS E++ VAYHESGHAV + + + KV+I+PRG AALG+ P EN L+ K +L + LGGRAAE+V L +ISTGA NDLE+ T + V+ Sbjct: 352 KVHIKGVKLANDVNL--QEVAKLTAGLAGADLANIINEAALLAGRNNQKEVKQQHLKEAVERGIAGLEKKSRRISPKEKKIVAYHESGHAVISEMTKGSTRVNKVSIIPRGMAALGYTLNTPEENKYLMQKHELIAEIDVLLGGRAAEEVFLEEISTGASNDLERATDIIKGMVS 524
BLAST of CX288820 vs. ExPASy Swiss-Prot
Match: FTSH_HELFE (Cell division protease ftsH homolog OS=Helicobacter felis GN=ftsH PE=3 SV=1) HSP 1 Score: 147.902 bits (372), Expect = 2.792e-35 Identity = 81/175 (46.29%), Postives = 113/175 (64.57%), Query Frame = 2 Query: 5 QVYLKKIKLDHEPSYYSQRLAALTPGFAGADIANVCNEAALIAARGENSQVTMEHFEAAIDRVIGGLEKKNKVISKLERRTVAYHESGHAVAGWFLEHAEPLLKVTIVPRGTAALGFAQYVPNEN-LLLTKEQLFDMTCMTLGGRAAEQVLLGKISTGAQNDLEKVTKMTYAQVA 526 +V++K +KL ++ Q +A LT G AGAD+AN+ NEAAL+A R +V +H + A++R I GLEKK++ IS E++ VAYHESGHAV + + + KV+I+PRG AALG+ P EN L+ K +L + LGGRAAE V L +ISTGA NDLE+ T + V+ Sbjct: 358 KVHIKPVKLANDVDL--QEIAKLTAGLAGADLANIINEAALLAGRNNQKEVKQQHLKEAVERGIAGLEKKSRRISPKEKKIVAYHESGHAVISEMTKGSARVNKVSIIPRGMAALGYTLNTPEENKYLMQKHELIAEIDVLLGGRAAEDVFLQEISTGASNDLERATDIIKGMVS 530
BLAST of CX288820 vs. ExPASy Swiss-Prot
Match: FTSH_HELPY (Cell division protease ftsH homolog OS=Helicobacter pylori GN=ftsH PE=1 SV=2) HSP 1 Score: 147.517 bits (371), Expect = 3.646e-35 Identity = 81/175 (46.29%), Postives = 114/175 (65.14%), Query Frame = 2 Query: 5 QVYLKKIKLDHEPSYYSQRLAALTPGFAGADIANVCNEAALIAARGENSQVTMEHFEAAIDRVIGGLEKKNKVISKLERRTVAYHESGHAVAGWFLEHAEPLLKVTIVPRGTAALGFAQYVPNEN-LLLTKEQLFDMTCMTLGGRAAEQVLLGKISTGAQNDLEKVTKMTYAQVA 526 +V++K +KL ++ + Q +A LT G AGAD+AN+ NEAAL+A R +V +H + A++R I GLEKK++ IS E++ VAYHESGHAV + + + KV+I+PRG AALG+ P EN L+ K +L + LGGRAAE V L +ISTGA NDLE+ T + V+ Sbjct: 352 KVHIKGVKLANDVNL--QEVAKLTAGLAGADLANIINEAALLAGRNNQKEVRQQHLKEAVERGIAGLEKKSRRISPKEKKIVAYHESGHAVISEMTKGSARVNKVSIIPRGMAALGYTLNTPEENKYLMQKHELIAEIDVLLGGRAAEDVFLEEISTGASNDLERATDIIKGMVS 524
BLAST of CX288820 vs. ExPASy Swiss-Prot
Match: FTSH_BACPF (Cell division protease ftsH homolog OS=Bacillus pseudofirmus GN=ftsH PE=3 SV=1) HSP 1 Score: 144.821 bits (364), Expect = 2.363e-34 Identity = 75/148 (50.68%), Postives = 106/148 (71.62%), Query Frame = 2 Query: 62 LAALTPGFAGADIANVCNEAALIAARGENSQVTMEHFEAAIDRVIGGLEKKNKVISKLERRTVAYHESGHAVAGWFLEHAEPLLKVTIVPRGTAALGFAQYVPNEN-LLLTKEQLFDMTCMTLGGRAAEQVLLGKISTGAQNDLEKVT 502 +A TPGF+GAD+ N+ NEAAL+AAR ++++++M H E AIDRVI G KK++VIS E++ VA+HE+GH V G LE+A+ + KVTIVPRG A G+A +P E+ +T+ +L D LGGR AE+V G++STGA ND ++ T Sbjct: 363 IATRTPGFSGADLENLLNEAALVAARHDHTKISMIHIEEAIDRVIAGPAKKSRVISPKEKKIVAWHEAGHTVVGVKLENADMVHKVTIVPRGMAG-GYAVMLPKEDRYFMTQPELLDKIIGLLGGRVAEEVTFGEVSTGAHNDFQRAT 509
BLAST of CX288820 vs. ExPASy Swiss-Prot
Match: FTSH_TREPA (Cell division protease ftsH homolog OS=Treponema pallidum GN=ftsH PE=3 SV=1) HSP 1 Score: 141.354 bits (355), Expect = 2.613e-33 Identity = 71/167 (42.51%), Postives = 116/167 (69.46%), Query Frame = 2 Query: 5 QVYLKKIKLDHEPSYYSQRLAALTPGFAGADIANVCNEAALIAARGENSQVTMEHFEAAIDRVIGGLEKKNKVISKLERRTVAYHESGHAVAGWFLEHAEPLLKVTIVPRGTAALGFAQYVPNENL-LLTKEQLFDMTCMTLGGRAAEQVLLGKISTGAQNDLEKVT 502 +++ + +KL P + +A +T G++GAD+ANV NEAAL+A R +QV + A+++ + GL+KK++VI + ERR +AYHE+GHA+AG F + A+ + K+TI+PRGT+ALG+ ++P ++ ++T++QL + L GRAAE V G++STGA ND+ + T Sbjct: 320 RIHAQNVKL--APEVDLKAVARITGGYSGADLANVVNEAALLAVRSGRAQVIETDLDEAVEKTMIGLQKKSRVIREEERRIIAYHETGHALAGTFTKGADKVHKITIIPRGTSALGYTFHIPEDDRHIVTEQQLLAEVDVLLSGRAAEFVAFGEVSTGAGNDISRAT 484 The following BLAST results are available for this feature:
BLAST of CX288820 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 82
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CX288820 ID=CX288820; Name=CX288820; organism=Citrus clementina; type=EST; length=531bpback to top |