CX288876

Overview
NameCX288876
Unique NameCX288876
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length598
Libraries
Library NameType
IF1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX288876 vs. ExPASy Swiss-Prot
Match: MPK5_ARATH (Mitogen-activated protein kinase 5 OS=Arabidopsis thaliana GN=MPK5 PE=2 SV=2)

HSP 1 Score: 327.405 bits (838), Expect = 3.349e-89
Identity = 153/196 (78.06%), Postives = 177/196 (90.31%), Query Frame = 2
Query:   11 RGIPLYGGKYVQYNILGNLFQVSSKYVPPLQPIGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREIKLLCHMTHENIVKVKDIIPPMDKEKFNDVYIVYELMDTDLHQIIRSKQALTDDHCQYFLYQLLRGLKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLARTTSETDFMTEYVVTRWYRAP 598
            +G+ ++GG+Y QYN+ GNLF+VS+KYVPP++PIGRGAYG VC+AV+SET EE+AIKKI  AFDN++DAKR LREIKLL H+ HEN+V +KDII P  KE F DVYIV+ELMDTDLHQIIRS Q+L DDHCQYFLYQ+LRGLKYIHSANVLHRDLKPSNLLLN+NCDLKI DFGLARTTSET++MTEYVVTRWYRAP
Sbjct:   17 KGVLVHGGRYFQYNVYGNLFEVSNKYVPPIRPIGRGAYGFVCAAVDSETHEEIAIKKIGKAFDNKVDAKRTLREIKLLRHLEHENVVVIKDIIRPPKKEDFVDVYIVFELMDTDLHQIIRSNQSLNDDHCQYFLYQILRGLKYIHSANVLHRDLKPSNLLLNSNCDLKITDFGLARTTSETEYMTEYVVTRWYRAP 212          
BLAST of CX288876 vs. ExPASy Swiss-Prot
Match: MPK2_ORYSJ (Mitogen-activated protein kinase 2 OS=Oryza sativa subsp. japonica GN=MPK2 PE=2 SV=1)

HSP 1 Score: 323.553 bits (828), Expect = 4.835e-88
Identity = 149/196 (76.02%), Postives = 175/196 (89.29%), Query Frame = 2
Query:   11 RGIPLYGGKYVQYNILGNLFQVSSKYVPPLQPIGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREIKLLCHMTHENIVKVKDIIPPMDKEKFNDVYIVYELMDTDLHQIIRSKQALTDDHCQYFLYQLLRGLKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLARTTSETDFMTEYVVTRWYRAP 598
            +G   +GG+YVQYN+ GNLF+VSSKYVPP++P+GRGA GI+C+ VN++T++EVAIKKI NAFDN+IDAKR LREIKLL HM H+N++ +KDII P  +E FNDVYIVYELMDTDLH ++RS Q LTDDHCQYFLYQ+LRGLKY+HSANVLHRDL+PSNLLLNA CDLKI DFGLARTT+ETDFM EYVVTRWYRAP
Sbjct:   35 KGTLTHGGRYVQYNVYGNLFEVSSKYVPPIRPVGRGACGIICAVVNAQTRQEVAIKKIGNAFDNQIDAKRTLREIKLLRHMDHDNVISIKDIIRPPRRENFNDVYIVYELMDTDLHHLLRSNQPLTDDHCQYFLYQVLRGLKYVHSANVLHRDLRPSNLLLNAKCDLKIGDFGLARTTNETDFMMEYVVTRWYRAP 230          
BLAST of CX288876 vs. ExPASy Swiss-Prot
Match: MPK11_ARATH (Mitogen-activated protein kinase 11 OS=Arabidopsis thaliana GN=MPK11 PE=1 SV=1)

HSP 1 Score: 317.005 bits (811), Expect = 4.526e-86
Identity = 154/197 (78.17%), Postives = 171/197 (86.80%), Query Frame = 2
Query:    8 DRGIPLYGGKYVQYNILGNLFQVSSKYVPPLQPIGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREIKLLCHMTHENIVKVKDIIPPMDKEKFNDVYIVYELMDTDLHQIIRSKQALTDDHCQYFLYQLLRGLKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLARTTSETDFMTEYVVTRWYRAP 598
            +RG+ + GG+YVQYN+ GNLF+VS KYVPPL+PIGRGA GIVC+A NSET EEVAIKKI NAF N IDAKR LREIKLL HM H+N++ + DII P   + FNDV+IVYELMDTDLH IIRS Q LTDDH ++FLYQLLRGLKY+HSANVLHRDLKPSNLLLNANCDLKI DFGLART SETDFMTEYVVTRWYRAP
Sbjct:   13 NRGVSINGGRYVQYNVYGNLFEVSKKYVPPLRPIGRGASGIVCAAWNSETGEEVAIKKIGNAFGNIIDAKRTLREIKLLKHMDHDNVIAIIDIIRPPQPDNFNDVHIVYELMDTDLHHIIRSNQPLTDDHSRFFLYQLLRGLKYVHSANVLHRDLKPSNLLLNANCDLKIGDFGLARTKSETDFMTEYVVTRWYRAP 209          
BLAST of CX288876 vs. ExPASy Swiss-Prot
Match: MPK3_ARATH (Mitogen-activated protein kinase 3 OS=Arabidopsis thaliana GN=MPK3 PE=1 SV=2)

HSP 1 Score: 307.375 bits (786), Expect = 3.586e-83
Identity = 140/194 (72.16%), Postives = 171/194 (88.14%), Query Frame = 2
Query:   17 IPLYGGKYVQYNILGNLFQVSSKYVPPLQPIGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREIKLLCHMTHENIVKVKDIIPPMDKEKFNDVYIVYELMDTDLHQIIRSKQALTDDHCQYFLYQLLRGLKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLARTTSETDFMTEYVVTRWYRAP 598
            +  +GG+++ Y+I G+LF+++SKY PP+ PIGRGAYGIVCS +++ET E VA+KKI NAFDN +DAKR LREIKLL H+ HENI+ ++D++PP  + +F+DVYI  ELMDTDLHQIIRS Q+L+++HCQYFLYQLLRGLKYIHSAN++HRDLKPSNLLLNANCDLKICDFGLAR TSE DFMTEYVVTRWYRAP
Sbjct:   14 VETHGGQFISYDIFGSLFEITSKYRPPIIPIGRGAYGIVCSVLDTETNELVAMKKIANAFDNHMDAKRTLREIKLLRHLDHENIIAIRDVVPPPLRRQFSDVYISTELMDTDLHQIIRSNQSLSEEHCQYFLYQLLRGLKYIHSANIIHRDLKPSNLLLNANCDLKICDFGLARPTSENDFMTEYVVTRWYRAP 207          
BLAST of CX288876 vs. ExPASy Swiss-Prot
Match: MPK5_ORYSJ (Mitogen-activated protein kinase 5 OS=Oryza sativa subsp. japonica GN=MPK5 PE=1 SV=1)

HSP 1 Score: 303.523 bits (776), Expect = 5.178e-82
Identity = 141/191 (73.82%), Postives = 166/191 (86.91%), Query Frame = 2
Query:   26 YGGKYVQYNILGNLFQVSSKYVPPLQPIGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREIKLLCHMTHENIVKVKDIIPPMDKEKFNDVYIVYELMDTDLHQIIRSKQALTDDHCQYFLYQLLRGLKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLARTTSETDFMTEYVVTRWYRAP 598
            +GG+Y+ Y+I GN F+V++KY PP+ PIGRGAYGIVCS +N ET+E VAIKKI NAF+N +DAKR LREIKLL H+ HENI+ ++D+IPP   + FNDVYI  ELMDTDLH IIRS Q L+++HCQYFLYQ+LRGLKYIHSANV+HRDLKPSNLLLNANCDLKICDFGLAR +SE+D MTEYVVTRWYRAP
Sbjct:   15 HGGRYLLYDIFGNKFEVTNKYQPPIMPIGRGAYGIVCSVMNFETREMVAIKKIANAFNNDMDAKRTLREIKLLRHLDHENIIGIRDVIPPPIPQAFNDVYIATELMDTDLHHIIRSNQELSEEHCQYFLYQILRGLKYIHSANVIHRDLKPSNLLLNANCDLKICDFGLARPSSESDMMTEYVVTRWYRAP 205          
BLAST of CX288876 vs. ExPASy Swiss-Prot
Match: MPK5_ORYSI (Mitogen-activated protein kinase 5 OS=Oryza sativa subsp. indica GN=MPK5 PE=1 SV=2)

HSP 1 Score: 303.523 bits (776), Expect = 5.178e-82
Identity = 141/191 (73.82%), Postives = 166/191 (86.91%), Query Frame = 2
Query:   26 YGGKYVQYNILGNLFQVSSKYVPPLQPIGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREIKLLCHMTHENIVKVKDIIPPMDKEKFNDVYIVYELMDTDLHQIIRSKQALTDDHCQYFLYQLLRGLKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLARTTSETDFMTEYVVTRWYRAP 598
            +GG+Y+ Y+I GN F+V++KY PP+ PIGRGAYGIVCS +N ET+E VAIKKI NAF+N +DAKR LREIKLL H+ HENI+ ++D+IPP   + FNDVYI  ELMDTDLH IIRS Q L+++HCQYFLYQ+LRGLKYIHSANV+HRDLKPSNLLLNANCDLKICDFGLAR +SE+D MTEYVVTRWYRAP
Sbjct:   15 HGGRYLLYDIFGNKFEVTNKYQPPIMPIGRGAYGIVCSVMNFETREMVAIKKIANAFNNDMDAKRTLREIKLLRHLDHENIIGIRDVIPPPIPQAFNDVYIATELMDTDLHHIIRSNQELSEEHCQYFLYQILRGLKYIHSANVIHRDLKPSNLLLNANCDLKICDFGLARPSSESDMMTEYVVTRWYRAP 205          
BLAST of CX288876 vs. ExPASy Swiss-Prot
Match: MPK12_ARATH (Mitogen-activated protein kinase 12 OS=Arabidopsis thaliana GN=MPK12 PE=1 SV=1)

HSP 1 Score: 300.056 bits (767), Expect = 5.725e-81
Identity = 141/194 (72.68%), Postives = 168/194 (86.60%), Query Frame = 2
Query:   17 IPLYGGKYVQYNILGNLFQVSSKYVPPLQPIGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREIKLLCHMTHENIVKVKDIIPPMDKEKFNDVYIVYELMDTDLHQIIRSKQALTDDHCQYFLYQLLRGLKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLARTTSETDFMTEYVVTRWYRAP 598
            +P +GG+YVQYN+ G LF+VS KYVPP++PIGRGA GIVC+AVNS T E+VAIKKI NAFDN IDAKR LREIKLL HM HEN++ +KDI+ P  ++ FNDVYIVYELMDTDL +I+RS Q LT D C++ +YQLLRGLKY+HSAN+LHRDL+PSN+LLN+  +LKI DFGLARTTS+TDFMTEYVVTRWYRAP
Sbjct:   17 VPTHGGRYVQYNVYGQLFEVSRKYVPPIRPIGRGACGIVCAAVNSVTGEKVAIKKIGNAFDNIIDAKRTLREIKLLRHMDHENVITIKDIVRPPQRDIFNDVYIVYELMDTDLQRILRSNQTLTSDQCRFLVYQLLRGLKYVHSANILHRDLRPSNVLLNSKNELKIGDFGLARTTSDTDFMTEYVVTRWYRAP 210          
BLAST of CX288876 vs. ExPASy Swiss-Prot
Match: MAPK_PETHY (Mitogen-activated protein kinase homolog 1 OS=Petunia hybrida GN=MEK1 PE=2 SV=1)

HSP 1 Score: 284.648 bits (727), Expect = 2.489e-76
Identity = 137/196 (69.90%), Postives = 166/196 (84.69%), Query Frame = 2
Query:   14 GIPLYGGKYVQYNILGNLFQVSSKYVPPLQPIGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREIKLLCHMTHENIVKVKDIIPPMDKEKFNDVYIVYELMDTDLHQIIRSKQALTDDHCQYFLYQLLRGLKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLARTTSETD-FMTEYVVTRWYRAP 598
            GI   G  Y  Y++  +LF++ +KYVP ++PIGRGAYGIVCS+VN ET E+VAIKKI NAF+NRIDA R LRE+KLL H+ HEN++ +KD++ P+ +  F DVY+VYELMDTDLHQII+S Q L++DHCQYFL+QLLRGLKY+HSAN+LHRDLKP NLL+NANCDLKICDFGLART+S  D FMTEYVVTRWYRAP
Sbjct:   10 GIRTPGKHY--YSMWQSLFEIDTKYVP-IKPIGRGAYGIVCSSVNRETNEKVAIKKINNAFENRIDALRTLRELKLLRHLRHENVIALKDVMMPIQRRSFKDVYLVYELMDTDLHQIIKSSQTLSNDHCQYFLFQLLRGLKYLHSANILHRDLKPGNLLINANCDLKICDFGLARTSSGKDQFMTEYVVTRWYRAP 202          
BLAST of CX288876 vs. ExPASy Swiss-Prot
Match: NTF3_TOBAC (Mitogen-activated protein kinase homolog NTF3 OS=Nicotiana tabacum GN=NTF3 PE=1 SV=1)

HSP 1 Score: 284.263 bits (726), Expect = 3.251e-76
Identity = 137/196 (69.90%), Postives = 166/196 (84.69%), Query Frame = 2
Query:   14 GIPLYGGKYVQYNILGNLFQVSSKYVPPLQPIGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREIKLLCHMTHENIVKVKDIIPPMDKEKFNDVYIVYELMDTDLHQIIRSKQALTDDHCQYFLYQLLRGLKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLARTTSETD-FMTEYVVTRWYRAP 598
            GI   G  Y  Y++  +LF++ +KYVP ++PIGRGAYGIVCS+VN ET E+VAIKKI NAF+NRIDA R LRE+KLL H+ HEN++ +KD++ P+ +  F DVY+VYELMDTDLHQII+S Q L++DHCQYFL+QLLRGLKY+HSAN+LHRDLKP NLL+NANCDLKICDFGLART+S  D FMTEYVVTRWYRAP
Sbjct:   10 GIRTPGKHY--YSMWQSLFEIDTKYVP-IKPIGRGAYGIVCSSVNRETNEKVAIKKINNAFENRIDALRTLRELKLLRHLRHENVIALKDVMMPIHRRSFKDVYLVYELMDTDLHQIIKSSQTLSNDHCQYFLFQLLRGLKYLHSANILHRDLKPGNLLINANCDLKICDFGLARTSSGKDQFMTEYVVTRWYRAP 202          
BLAST of CX288876 vs. ExPASy Swiss-Prot
Match: MPK3_ORYSJ (Mitogen-activated protein kinase 3 OS=Oryza sativa subsp. japonica GN=MPK3 PE=2 SV=1)

HSP 1 Score: 279.641 bits (714), Expect = 8.007e-75
Identity = 133/190 (70.00%), Postives = 162/190 (85.26%), Query Frame = 2
Query:   32 GKYVQYNILGNLFQVSSKYVPPLQPIGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREIKLLCHMTHENIVKVKDIIPPMDKEKFNDVYIVYELMDTDLHQIIRSKQALTDDHCQYFLYQLLRGLKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLART-TSETDFMTEYVVTRWYRAP 598
            GKY  Y++   LF++ +KYVP ++PIGRGAYGIVCS++N ET E+VAIKKI N FDNR+DA R LRE+KLL H+ HEN++ +KDI+ P+ +  F DVY+VYELMDTDLHQII+S Q L++DHCQYFL+QLLRGLKY+HSA +LHRDLKP NLL+NANCDLKICDFGLART +S+  FMTEYVVTRWYRAP
Sbjct:   15 GKYY-YSMWQTLFEIDTKYVP-IKPIGRGAYGIVCSSINRETNEKVAIKKIHNVFDNRVDALRTLRELKLLRHLRHENVIALKDIMMPVHRRSFKDVYLVYELMDTDLHQIIKSPQGLSNDHCQYFLFQLLRGLKYLHSAEILHRDLKPGNLLVNANCDLKICDFGLARTNSSKGQFMTEYVVTRWYRAP 202          
The following BLAST results are available for this feature:
BLAST of CX288876 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
MPK5_ARATH3.349e-8978.06Mitogen-activated protein kinase 5 OS=Arabidopsis ... [more]
MPK2_ORYSJ4.835e-8876.02Mitogen-activated protein kinase 2 OS=Oryza sativa... [more]
MPK11_ARATH4.526e-8678.17Mitogen-activated protein kinase 11 OS=Arabidopsis... [more]
MPK3_ARATH3.586e-8372.16Mitogen-activated protein kinase 3 OS=Arabidopsis ... [more]
MPK5_ORYSJ5.178e-8273.82Mitogen-activated protein kinase 5 OS=Oryza sativa... [more]
MPK5_ORYSI5.178e-8273.82Mitogen-activated protein kinase 5 OS=Oryza sativa... [more]
MPK12_ARATH5.725e-8172.68Mitogen-activated protein kinase 12 OS=Arabidopsis... [more]
MAPK_PETHY2.489e-7669.90Mitogen-activated protein kinase homolog 1 OS=Petu... [more]
NTF3_TOBAC3.251e-7669.90Mitogen-activated protein kinase homolog NTF3 OS=N... [more]
MPK3_ORYSJ8.007e-7570.00Mitogen-activated protein kinase 3 OS=Oryza sativa... [more]

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Properties
Property NameValue
Genbank descriptionC02006D09SK IF1 Citrus clementina cDNA clone C02006D09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX288876 ID=CX288876; Name=CX288876; organism=Citrus clementina; type=EST; length=598bp
GATGAAAGACAGAGGGATTCCACTGTACGGTGGCAAATACGTACAGTACA
ATATTCTAGGAAACCTCTTTCAGGTCTCCTCTAAGTATGTTCCTCCTCTT
CAGCCTATTGGTCGCGGCGCATACGGCATCGTTTGTAGTGCTGTAAATTC
AGAGACAAAAGAAGAGGTTGCAATAAAGAAAATTACGAATGCATTCGATA
ACAGGATTGATGCCAAGAGGATCCTCCGTGAGATCAAACTCCTCTGTCAC
ATGACTCATGAGAATATTGTCAAGGTGAAGGACATAATACCACCGATGGA
TAAGGAAAAGTTCAATGACGTTTATATTGTATATGAGTTGATGGATACTG
ATCTGCATCAGATAATACGCTCCAAACAGGCTCTGACTGATGATCATTGT
CAGTATTTCCTATACCAATTGCTGCGGGGACTGAAGTACATACACTCTGC
TAATGTTTTGCACCGAGATTTAAAACCAAGCAACCTGCTGCTCAATGCAA
ACTGTGATCTTAAGATTTGTGACTTTGGACTAGCAAGAACCACTTCAGAG
ACAGATTTCATGACGGAGTATGTTGTAACCCGATGGTATCGAGCCCCT
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