CX288876

Overview
NameCX288876
Unique NameCX288876
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length598
Libraries
Library NameType
IF1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX288876 vs. ExPASy Swiss-Prot
Match: PXI_DICDI (Probable serine/threonine-protein kinase pXi OS=Dictyostelium discoideum GN=pXi PE=2 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 1.437e-15
Identity = 50/168 (29.76%), Postives = 91/168 (54.17%), Query Frame = 2
Query:  107 IGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREIKLLCHMTHENIVKVKDIIPPMDKEKFNDVYIVYELMDT-DLHQIIRSKQALTDDHCQYFLYQLLRGLKYIHSANVLHRDLKPSNLLLNANCD---LKICDFGLARTTSETDFMTEYVVTRWYRAP 598
            IG G +  V S  N  T ++ AIK +  +    ++   I++EI+++  + H+NI+K++++      E  N+V +V EL+   +L   I  ++  T+      +  + + ++Y+HS +++H DLKP NLL + N D   +K+CDFGL++       +   V T  Y AP
Sbjct:   24 IGNGKFAQVHSGTNKSTGKKSAIKIMKKSI---VEESAIIKEIEMMTEINHQNIIKLQEVY-----ETDNEVLLVLELVTGGELFDKIVEREFYTEQDASTLIGTVTKVIQYLHSKDIVHCDLKPENLLYSDNSDQAIIKLCDFGLSQRCGSGSPLRSLVGTLTYMAP 183          
BLAST of CX288876 vs. ExPASy Swiss-Prot
Match: PLK4_PONAB (Serine/threonine-protein kinase PLK4 OS=Pongo abelii GN=PLK4 PE=2 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 1.437e-15
Identity = 48/146 (32.88%), Postives = 88/146 (60.27%), Query Frame = 2
Query:  107 IGRGAYGIVCSAVNSETKEEVAIKKITN-AFDNRIDAKRILREIKLLCHMTHENIVKVKDIIPPMDKEKFNDVYIVYELMDT-DLHQIIRSK-QALTDDHCQYFLYQLLRGLKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLA 535
            +G+G++  V  A +  T  EVAIK I   A       +R+  E+K+ C + H +I+++ +       E  N VY+V E+    ++++ ++++ +  +++  ++F++Q++ G+ Y+HS  +LHRDL  SNLLL  N ++KI DFGLA
Sbjct:   18 LGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELYNYF-----EDSNYVYLVLEMCHNGEMNRYLKNRVKPFSENEARHFMHQIITGMLYLHSHGILHRDLTLSNLLLTRNMNIKIADFGLA 158          
BLAST of CX288876 vs. ExPASy Swiss-Prot
Match: PLK4_HUMAN (Serine/threonine-protein kinase PLK4 OS=Homo sapiens GN=PLK4 PE=1 SV=3)

HSP 1 Score: 82.8037 bits (203), Expect = 1.437e-15
Identity = 48/146 (32.88%), Postives = 88/146 (60.27%), Query Frame = 2
Query:  107 IGRGAYGIVCSAVNSETKEEVAIKKITN-AFDNRIDAKRILREIKLLCHMTHENIVKVKDIIPPMDKEKFNDVYIVYELMDT-DLHQIIRSK-QALTDDHCQYFLYQLLRGLKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLA 535
            +G+G++  V  A +  T  EVAIK I   A       +R+  E+K+ C + H +I+++ +       E  N VY+V E+    ++++ ++++ +  +++  ++F++Q++ G+ Y+HS  +LHRDL  SNLLL  N ++KI DFGLA
Sbjct:   18 LGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELYNYF-----EDSNYVYLVLEMCHNGEMNRYLKNRVKPFSENEARHFMHQIITGMLYLHSHGILHRDLTLSNLLLTRNMNIKIADFGLA 158          
BLAST of CX288876 vs. ExPASy Swiss-Prot
Match: MYLKA_DICDI (Myosin light chain kinase A OS=Dictyostelium discoideum GN=mlkA PE=1 SV=2)

HSP 1 Score: 82.8037 bits (203), Expect = 1.437e-15
Identity = 52/170 (30.59%), Postives = 90/170 (52.94%), Query Frame = 2
Query:  101 QPIGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREIKLLCHMTHENIVKVKDIIPPMDKEKFNDVYIVYELM-DTDLHQIIRSKQALTDDHCQYFLYQLLRGLKYIHSANVLHRDLKPSNLLLNA---NCDLKICDFGLARTTSETDFMTEYVVTRWYRAP 598
            + +GRGA+ IV    N +TK+  AIK I  +   +   K +  E+ +L  + H NI+ +K++    +K     +Y+V EL+   +L   I  K + ++      + +++  + Y+H  N++HRDLKP NLLL +   + ++ I DFGL++   +T  M     T  Y AP
Sbjct:   12 EELGRGAFSIVYLGENKQTKQRYAIKVINKSELGKDYEKNLKMEVDILKKVNHPNIIALKELFDTPEK-----LYLVMELVTGGELFDKIVEKGSYSEADAANLVKKIVSAVGYLHGLNIVHRDLKPENLLLKSKENHLEVAIADFGLSKIIGQTLVMQTACGTPSYVAP 176          
BLAST of CX288876 vs. ExPASy Swiss-Prot
Match: AAPK1_CAEEL (5'-AMP-activated protein kinase catalytic subunit alpha-1 OS=Caenorhabditis elegans GN=aak-1 PE=2 SV=2)

HSP 1 Score: 82.8037 bits (203), Expect = 1.437e-15
Identity = 54/168 (32.14%), Postives = 90/168 (53.57%), Query Frame = 2
Query:  101 QPIGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILR-EIKLLCHMTHENIVKVKDIIPPMDKEKFNDVYIVYELMDT-DLHQIIRSKQALTDDHCQYFLYQLLRGLKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLARTTSETDFMTEYVVTRWYRAP 598
            + IG+GA+G V    + +T  +VAIK +       +      R EI  L  +TH +I ++  +I        +D+++V EL+   +L   I  K AL     + +  Q++ G+ Y H+  ++HRDLKP NLLL+AN ++KI DFGL+   ++ D ++    +  Y AP
Sbjct:   28 ETIGKGAFGAVKRGTHIQTGYDVAIKILNRGRMKGLGTVNKTRNEIDNLQKLTHPHITRLFRVISTP-----SDIFLVMELVSGGELFSYITRKGALPIRESRRYFQQIISGVSYCHNHMIVHRDLKPENLLLDANKNIKIADFGLSNYMTDGDLLSTACGSPNYAAP 190          
BLAST of CX288876 vs. ExPASy Swiss-Prot
Match: ULK2_MOUSE (Serine/threonine-protein kinase ULK2 OS=Mus musculus GN=Ulk2 PE=1 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 1.876e-15
Identity = 57/177 (32.20%), Postives = 91/177 (51.41%), Query Frame = 2
Query:  107 IGRGAYGIVCSAVNSE-TKEEVAIKKITNAFDNRIDAKRIL--REIKLLCHMTHENIVKVKDIIPPMDKEKFNDVYIVYELMDT-DLHQIIRSKQALTDDHCQYFLYQLLRGLKYIHSANVLHRDLKPSNLLLN---------ANCDLKICDFGLARTTSETDFMTEYVVTRWYRAP 598
            +G GA+ +V    + + T  EVAIK I       +   +IL  +EIK+L  + HENIV + D+     +E  N V++V E  +  DL   +++K  L++D  + FL+Q+   ++ +HS  ++HRDLKP N+LL+         +   +KI DFG AR             +  Y AP
Sbjct:   15 VGHGAFAVVFRGRHRQKTDWEVAIKSINK---KNLSKSQILLGKEIKILKELQHENIVALYDV-----QELPNSVFLVMEYCNGGDLADYLQAKGTLSEDTIRVFLHQIAAAMRILHSKGIIHRDLKPQNILLSYANRRKSNVSGIRIKIADFGFARYLHSNTMAATLCGSPMYMAP 183          
BLAST of CX288876 vs. ExPASy Swiss-Prot
Match: ULK1_MOUSE (Serine/threonine-protein kinase ULK1 OS=Mus musculus GN=Ulk1 PE=1 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 1.876e-15
Identity = 58/176 (32.95%), Postives = 90/176 (51.14%), Query Frame = 2
Query:  107 IGRGAYGIVCSAVNSETKE-EVAIKKITNAFDNRIDAKRIL-REIKLLCHMTHENIVKVKDIIPPMDKEKFNDVYIVYELMDT-DLHQIIRSKQALTDDHCQYFLYQLLRGLKYIHSANVLHRDLKPSNLLLN---------ANCDLKICDFGLARTTSETDFMTEYVVTRWYRAP 598
            IG GA+ +V    + E  + EVA+K I     N   ++ +L +EIK+L  + HENIV + D      +E  N VY+V E  +  DL   + + + L++D  + FL Q+   ++ +HS  ++HRDLKP N+LL+         +N  +KI DFG AR             +  Y AP
Sbjct:   22 IGHGAFAVVFKGRHREKHDLEVAVKCINKK--NLAKSQTLLGKEIKILKELKHENIVALYDF-----QEMANSVYLVMEYCNGGDLADYLHTMRTLSEDTVRLFLQQIAGAMRLLHSKGIIHRDLKPQNILLSNPGGRRANPSNIRVKIADFGFARYLQSNMMAATLCGSPMYMAP 190          
BLAST of CX288876 vs. ExPASy Swiss-Prot
Match: SSN3_ASPNC (Serine/threonine-protein kinase ssn3 OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513) GN=ssn3 PE=3 SV=2)

HSP 1 Score: 82.4185 bits (202), Expect = 1.876e-15
Identity = 63/179 (35.20%), Postives = 94/179 (52.51%), Query Frame = 2
Query:  107 IGRGAYGIVCSAVNSE-TKEEVAIKKITNAFDNRID-----AKRILREIKLLCHMTHENIVKVKDIIPPMDKEKFNDVYIVYELMDTDLHQIIR-----SKQALTDDHCQYFLYQLLRGLKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLAR----TTSETDFMTEYVVTRWYRAP 598
            I  G YG V  A+     K E AIKK     +  I      ++  +RE+ L   + H N+V++ +II   DK     +++V+E  + DL QII       + A+     +  L+QLL GL Y+H+  VLHRDLKP+N+L+ ++  ++I D GLAR      +      + VVT WYRAP
Sbjct:   46 ISSGTYGRVYKAIGKNGQKGEFAIKKFKPDKEGEIIQYTGLSQSAIREMALCSELDHPNVVQLAEIILE-DK----CIFMVFEYTEHDLLQIIHHHTQPQRHAIPALMVRSILFQLLNGLLYLHTNWVLHRDLKPANILVTSSGAIRIGDLGLARLFYKPLNSLFSGDKVVVTIWYRAP 219          
BLAST of CX288876 vs. ExPASy Swiss-Prot
Match: PLK4_DANRE (Serine/threonine-protein kinase PLK4 OS=Danio rerio GN=plk4 PE=2 SV=2)

HSP 1 Score: 82.4185 bits (202), Expect = 1.876e-15
Identity = 43/146 (29.45%), Postives = 88/146 (60.27%), Query Frame = 2
Query:  107 IGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRID-AKRILREIKLLCHMTHENIVKVKDIIPPMDKEKFNDVYIVYELMDT-DLHQIIRS-KQALTDDHCQYFLYQLLRGLKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLA 535
            +G+G++  V  A +  T  EVAIK I     ++    +R++ E+++ C + H +++++ +       E  N VY+V E+    ++ + ++  K   T++  ++F++Q+++G+ Y+H+  ++HRDL  +NLLL  + ++KI DFGLA
Sbjct:   18 LGKGSFACVYRAKSVNTGLEVAIKMIDKKAMHKAGMVQRVINEVEIQCRLKHPSVLELYNYF-----EDSNYVYLVLEMCHNGEMSRYLKERKNPFTEEEARHFMHQIVKGMLYLHTHGIMHRDLTLTNLLLTTSMNIKIADFGLA 158          
BLAST of CX288876 vs. ExPASy Swiss-Prot
Match: PLK4_BOVIN (Serine/threonine-protein kinase PLK4 OS=Bos taurus GN=PLK4 PE=2 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 1.876e-15
Identity = 48/146 (32.88%), Postives = 88/146 (60.27%), Query Frame = 2
Query:  107 IGRGAYGIVCSAVNSETKEEVAIKKITN-AFDNRIDAKRILREIKLLCHMTHENIVKVKDIIPPMDKEKFNDVYIVYELMDT-DLHQIIRSKQA-LTDDHCQYFLYQLLRGLKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLA 535
            +G+G++  V  A +  T  EVAIK I   A       +R+  E+K+ C + H +I+++ +       E  N VY+V E+    ++++ +++++   +++  ++F++Q++ G+ Y+HS  +LHRDL  SNLLL  N ++KI DFGLA
Sbjct:   18 LGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELYNYF-----EDNNYVYLVLEMCHNGEMNRYLKNRRKPFSENEARHFMHQIITGMLYLHSHGILHRDLTLSNLLLTRNMNIKIADFGLA 158          
The following BLAST results are available for this feature:
BLAST of CX288876 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
PXI_DICDI1.437e-1529.76Probable serine/threonine-protein kinase pXi OS=Di... [more]
PLK4_PONAB1.437e-1532.88Serine/threonine-protein kinase PLK4 OS=Pongo abel... [more]
PLK4_HUMAN1.437e-1532.88Serine/threonine-protein kinase PLK4 OS=Homo sapie... [more]
MYLKA_DICDI1.437e-1530.59Myosin light chain kinase A OS=Dictyostelium disco... [more]
AAPK1_CAEEL1.437e-1532.145'-AMP-activated protein kinase catalytic subunit ... [more]
ULK2_MOUSE1.876e-1532.20Serine/threonine-protein kinase ULK2 OS=Mus muscul... [more]
ULK1_MOUSE1.876e-1532.95Serine/threonine-protein kinase ULK1 OS=Mus muscul... [more]
SSN3_ASPNC1.876e-1535.20Serine/threonine-protein kinase ssn3 OS=Aspergillu... [more]
PLK4_DANRE1.876e-1529.45Serine/threonine-protein kinase PLK4 OS=Danio reri... [more]
PLK4_BOVIN1.876e-1532.88Serine/threonine-protein kinase PLK4 OS=Bos taurus... [more]

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Properties
Property NameValue
Genbank descriptionC02006D09SK IF1 Citrus clementina cDNA clone C02006D09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX288876 ID=CX288876; Name=CX288876; organism=Citrus clementina; type=EST; length=598bp
GATGAAAGACAGAGGGATTCCACTGTACGGTGGCAAATACGTACAGTACA
ATATTCTAGGAAACCTCTTTCAGGTCTCCTCTAAGTATGTTCCTCCTCTT
CAGCCTATTGGTCGCGGCGCATACGGCATCGTTTGTAGTGCTGTAAATTC
AGAGACAAAAGAAGAGGTTGCAATAAAGAAAATTACGAATGCATTCGATA
ACAGGATTGATGCCAAGAGGATCCTCCGTGAGATCAAACTCCTCTGTCAC
ATGACTCATGAGAATATTGTCAAGGTGAAGGACATAATACCACCGATGGA
TAAGGAAAAGTTCAATGACGTTTATATTGTATATGAGTTGATGGATACTG
ATCTGCATCAGATAATACGCTCCAAACAGGCTCTGACTGATGATCATTGT
CAGTATTTCCTATACCAATTGCTGCGGGGACTGAAGTACATACACTCTGC
TAATGTTTTGCACCGAGATTTAAAACCAAGCAACCTGCTGCTCAATGCAA
ACTGTGATCTTAAGATTTGTGACTTTGGACTAGCAAGAACCACTTCAGAG
ACAGATTTCATGACGGAGTATGTTGTAACCCGATGGTATCGAGCCCCT
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