CX288876

Overview
NameCX288876
Unique NameCX288876
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length598
Libraries
Library NameType
IF1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX288876 vs. ExPASy Swiss-Prot
Match: SUR1_CAEEL (Mitogen-activated protein kinase mpk-1 OS=Caenorhabditis elegans GN=mpk-1 PE=1 SV=2)

HSP 1 Score: 204.142 bits (518), Expect = 4.276e-52
Identity = 106/184 (57.61%), Postives = 138/184 (75.00%), Query Frame = 2
Query:   59 GNLFQVSSKYVPPLQPIGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREIKLLCHMTHENIVKVKDIIPPMDKEKFNDVYIVYELMDTDLHQIIRSKQALTDDHCQYFLYQLLRGLKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLART----TSETDFMTEYVVTRWYRAP 598
            G LF+V+ +YV  L  IG GAYG+V SA+++ T++ VAIKKI+  F+++   +R LREIK+L    HENI+ +++II     +   D+YIV  LM+TDL++++++ Q L++DH  YFLYQ+LRGLKYIHSANVLHRDLKPSNLLLN  CDLKICDFGLAR     T  T F+TEYV TRWYRAP
Sbjct:   87 GQLFEVAPRYVN-LSYIGEGAYGMVASALDTITRDRVAIKKIS-PFEHQTFCQRTLREIKILNRFKHENIINIQEIIRSETVDSLKDIYIVQCLMETDLYKLLKT-QKLSNDHVCYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVTDPQTDHTGFLTEYVATRWYRAP 267          
BLAST of CX288876 vs. ExPASy Swiss-Prot
Match: MK01_HUMAN (Mitogen-activated protein kinase 1 OS=Homo sapiens GN=MAPK1 PE=1 SV=3)

HSP 1 Score: 204.142 bits (518), Expect = 4.276e-52
Identity = 107/186 (57.53%), Postives = 134/186 (72.04%), Query Frame = 2
Query:   53 ILGNLFQVSSKYVPPLQPIGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREIKLLCHMTHENIVKVKDIIPPMDKEKFNDVYIVYELMDTDLHQIIRSKQALTDDHCQYFLYQLLRGLKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLARTT----SETDFMTEYVVTRWYRAP 598
            + G +F V  +Y   L  IG GAYG+VCSA ++  K  VAIKKI+  F+++   +R LREIK+L    HENI+ + DII     E+  DVYIV +LM+TDL++++++ Q L++DH  YFLYQ+LRGLKYIHSANVLHRDLKPSNLLLN  CDLKICDFGLAR        T F+TEYV TRWYRAP
Sbjct:   14 VRGQVFDVGPRYTN-LSYIGEGAYGMVCSAYDNVNKVRVAIKKIS-PFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKT-QHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAP 196          
BLAST of CX288876 vs. ExPASy Swiss-Prot
Match: MK01_BOVIN (Mitogen-activated protein kinase 1 OS=Bos taurus GN=MAPK1 PE=2 SV=3)

HSP 1 Score: 204.142 bits (518), Expect = 4.276e-52
Identity = 107/186 (57.53%), Postives = 134/186 (72.04%), Query Frame = 2
Query:   53 ILGNLFQVSSKYVPPLQPIGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREIKLLCHMTHENIVKVKDIIPPMDKEKFNDVYIVYELMDTDLHQIIRSKQALTDDHCQYFLYQLLRGLKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLARTT----SETDFMTEYVVTRWYRAP 598
            + G +F V  +Y   L  IG GAYG+VCSA ++  K  VAIKKI+  F+++   +R LREIK+L    HENI+ + DII     E+  DVYIV +LM+TDL++++++ Q L++DH  YFLYQ+LRGLKYIHSANVLHRDLKPSNLLLN  CDLKICDFGLAR        T F+TEYV TRWYRAP
Sbjct:   14 VRGQVFDVGPRYTN-LSYIGEGAYGMVCSAYDNVNKVRVAIKKIS-PFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKT-QHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAP 196          
BLAST of CX288876 vs. ExPASy Swiss-Prot
Match: MK01_RAT (Mitogen-activated protein kinase 1 OS=Rattus norvegicus GN=Mapk1 PE=1 SV=3)

HSP 1 Score: 203.756 bits (517), Expect = 5.584e-52
Identity = 107/186 (57.53%), Postives = 134/186 (72.04%), Query Frame = 2
Query:   53 ILGNLFQVSSKYVPPLQPIGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREIKLLCHMTHENIVKVKDIIPPMDKEKFNDVYIVYELMDTDLHQIIRSKQALTDDHCQYFLYQLLRGLKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLARTT----SETDFMTEYVVTRWYRAP 598
            + G +F V  +Y   L  IG GAYG+VCSA ++  K  VAIKKI+  F+++   +R LREIK+L    HENI+ + DII     E+  DVYIV +LM+TDL++++++ Q L++DH  YFLYQ+LRGLKYIHSANVLHRDLKPSNLLLN  CDLKICDFGLAR        T F+TEYV TRWYRAP
Sbjct:   12 VRGQVFDVGPRYTN-LSYIGEGAYGMVCSAYDNLNKVRVAIKKIS-PFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKT-QHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAP 194          
BLAST of CX288876 vs. ExPASy Swiss-Prot
Match: MK01_MOUSE (Mitogen-activated protein kinase 1 OS=Mus musculus GN=Mapk1 PE=1 SV=3)

HSP 1 Score: 203.756 bits (517), Expect = 5.584e-52
Identity = 107/186 (57.53%), Postives = 134/186 (72.04%), Query Frame = 2
Query:   53 ILGNLFQVSSKYVPPLQPIGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREIKLLCHMTHENIVKVKDIIPPMDKEKFNDVYIVYELMDTDLHQIIRSKQALTDDHCQYFLYQLLRGLKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLARTT----SETDFMTEYVVTRWYRAP 598
            + G +F V  +Y   L  IG GAYG+VCSA ++  K  VAIKKI+  F+++   +R LREIK+L    HENI+ + DII     E+  DVYIV +LM+TDL++++++ Q L++DH  YFLYQ+LRGLKYIHSANVLHRDLKPSNLLLN  CDLKICDFGLAR        T F+TEYV TRWYRAP
Sbjct:   12 VRGQVFDVGPRYTN-LSYIGEGAYGMVCSAYDNLNKVRVAIKKIS-PFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKT-QHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAP 194          
BLAST of CX288876 vs. ExPASy Swiss-Prot
Match: MPK12_ORYSJ (Mitogen-activated protein kinase 12 OS=Oryza sativa subsp. japonica GN=MPK12 PE=1 SV=2)

HSP 1 Score: 203.371 bits (516), Expect = 7.293e-52
Identity = 97/168 (57.74%), Postives = 128/168 (76.19%), Query Frame = 2
Query:  107 IGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREIKLLCHMTHENIVKVKDIIPPMDKEKFNDVYIVYELMDTDLHQIIRSKQALTDDHCQYFLYQLLRGLKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLARTT----SETDFMTEYVVTRWYRAP 598
            IG+G+YG+V +AV++ T E VAIKKI + F++  DA RILREIKLL  + H +IV++K I+ P  + +F D+Y+V+ELM++DLHQ+IR+   LT +H Q+FLYQLLR LKYIH+ANV HRDLKP N+L N++C LKICDFGLAR +        F T+YV TRWYRAP
Sbjct:   93 IGKGSYGVVAAAVDTRTGERVAIKKINDVFEHVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRREFQDIYVVFELMESDLHQVIRANDDLTPEHYQFFLYQLLRALKYIHAANVFHRDLKPKNILANSDCKLKICDFGLARASFNDAPSAIFWTDYVATRWYRAP 260          
BLAST of CX288876 vs. ExPASy Swiss-Prot
Match: MK01_XENLA (Mitogen-activated protein kinase 1 OS=Xenopus laevis GN=mapk1 PE=1 SV=3)

HSP 1 Score: 203.371 bits (516), Expect = 7.293e-52
Identity = 107/186 (57.53%), Postives = 134/186 (72.04%), Query Frame = 2
Query:   53 ILGNLFQVSSKYVPPLQPIGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREIKLLCHMTHENIVKVKDIIPPMDKEKFNDVYIVYELMDTDLHQIIRSKQALTDDHCQYFLYQLLRGLKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLARTT----SETDFMTEYVVTRWYRAP 598
            + G  F V  +Y+  L  IG GAYG+VCSA ++  K  VAIKKI+  F+++   +R LREIK+L    HENI+ + DII     E+  DVYIV +LM+TDL++++++ Q L++DH  YFLYQ+LRGLKYIHSANVLHRDLKPSNLLLN  CDLKICDFGLAR        T F+TEYV TRWYRAP
Sbjct:   17 VRGQAFDVGPRYIN-LAYIGEGAYGMVCSAHDNVNKVRVAIKKIS-PFEHQTYCQRTLREIKILLRFKHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKT-QHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAP 199          
BLAST of CX288876 vs. ExPASy Swiss-Prot
Match: MPK9_ARATH (Mitogen-activated protein kinase 9 OS=Arabidopsis thaliana GN=MPK9 PE=2 SV=2)

HSP 1 Score: 202.216 bits (513), Expect = 1.625e-51
Identity = 94/168 (55.95%), Postives = 130/168 (77.38%), Query Frame = 2
Query:  107 IGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREIKLLCHMTHENIVKVKDIIPPMDKEKFNDVYIVYELMDTDLHQIIRSKQALTDDHCQYFLYQLLRGLKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLARTT----SETDFMTEYVVTRWYRAP 598
            IG+G+YG+V SA+++ + E+VAIKKI + F++  DA RILREIKLL  + H +IV++K ++ P  + +F D+Y+V+ELM++DLHQ+I++   LT +H Q+FLYQLLRGLK+IH+ANV HRDLKP N+L N++C LKICDFGLAR +        F T+YV TRWYRAP
Sbjct:   29 IGKGSYGVVASAIDTHSGEKVAIKKINDVFEHVSDATRILREIKLLRLLRHPDIVEIKHVMLPPSRREFRDIYVVFELMESDLHQVIKANDDLTPEHYQFFLYQLLRGLKFIHTANVFHRDLKPKNILANSDCKLKICDFGLARVSFNDAPSAIFWTDYVATRWYRAP 196          
BLAST of CX288876 vs. ExPASy Swiss-Prot
Match: MAPK1_PNECA (Mitogen-activated protein kinase 1 OS=Pneumocystis carinii GN=MKP1 PE=1 SV=1)

HSP 1 Score: 200.29 bits (508), Expect = 6.174e-51
Identity = 108/196 (55.10%), Postives = 140/196 (71.43%), Query Frame = 2
Query:   35 KYVQYNILGNLFQVSSKYVPPLQPIGRGAYGIVCSAVNSETKE--EVAIKKITNAFDNRIDAKRILREIKLLCHM-THENIVKVKDIIPPMDKEKFNDVYIVYELMDTDLHQIIRSKQALTDDHCQYFLYQLLRGLKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLARTTS-----ETDFMTEYVVTRWYRAP 598
            K+  +N++G  F +   Y   ++ +G+G+YG+VCSA N E ++  +VAIKKITN F  ++ AKR LREI LL H   H+NI  + D+   +D  KFN++Y+  ELM  +L+ IIRS Q LTD H Q F+YQ+L GLKYIHSANVLHRDLKPSNLL+NA+C LKICDFGL+R  S      T++MTEYV TRWYRAP
Sbjct:    4 KHSVFNVMGQEFVLQKGY-EVIKGLGKGSYGVVCSAKNIEVEDNNKVAIKKITNIFSKKMLAKRALREIMLLQHFRNHKNITTLYDM-DIVDPSKFNELYLYEELMQANLNSIIRSDQPLTDAHFQSFIYQILCGLKYIHSANVLHRDLKPSNLLINADCKLKICDFGLSRGISVNQGQGTEYMTEYVTTRWYRAP 197          
BLAST of CX288876 vs. ExPASy Swiss-Prot
Match: MPK16_ORYSJ (Mitogen-activated protein kinase 16 OS=Oryza sativa subsp. japonica GN=MPK16 PE=2 SV=1)

HSP 1 Score: 199.904 bits (507), Expect = 8.063e-51
Identity = 94/168 (55.95%), Postives = 128/168 (76.19%), Query Frame = 2
Query:  107 IGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREIKLLCHMTHENIVKVKDIIPPMDKEKFNDVYIVYELMDTDLHQIIRSKQALTDDHCQYFLYQLLRGLKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLART----TSETDFMTEYVVTRWYRAP 598
            +G+G+YG+V +AV++ T   VAIKKI + F++  DA RILREIKLL  + H +IV++K I+ P  + +F D+YI++ELM++DLHQ+I++   LT +H Q+FLYQLLRG+KYIH+A+V HRDLKP N+L NA+C +KICDFGLAR     T    F T+YV TRWYRAP
Sbjct:   28 VGKGSYGVVAAAVDTHTGGRVAIKKINDVFEHISDATRILREIKLLRLLRHPDIVEIKHIMLPPSRREFRDIYIIFELMESDLHQVIKANDDLTPEHHQFFLYQLLRGMKYIHAASVFHRDLKPKNILANADCKVKICDFGLARVSFDDTPSAIFWTDYVATRWYRAP 195          
The following BLAST results are available for this feature:
BLAST of CX288876 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
SUR1_CAEEL4.276e-5257.61Mitogen-activated protein kinase mpk-1 OS=Caenorha... [more]
MK01_HUMAN4.276e-5257.53Mitogen-activated protein kinase 1 OS=Homo sapiens... [more]
MK01_BOVIN4.276e-5257.53Mitogen-activated protein kinase 1 OS=Bos taurus G... [more]
MK01_RAT5.584e-5257.53Mitogen-activated protein kinase 1 OS=Rattus norve... [more]
MK01_MOUSE5.584e-5257.53Mitogen-activated protein kinase 1 OS=Mus musculus... [more]
MPK12_ORYSJ7.293e-5257.74Mitogen-activated protein kinase 12 OS=Oryza sativ... [more]
MK01_XENLA7.293e-5257.53Mitogen-activated protein kinase 1 OS=Xenopus laev... [more]
MPK9_ARATH1.625e-5155.95Mitogen-activated protein kinase 9 OS=Arabidopsis ... [more]
MAPK1_PNECA6.174e-5155.10Mitogen-activated protein kinase 1 OS=Pneumocystis... [more]
MPK16_ORYSJ8.063e-5155.95Mitogen-activated protein kinase 16 OS=Oryza sativ... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionC02006D09SK IF1 Citrus clementina cDNA clone C02006D09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX288876 ID=CX288876; Name=CX288876; organism=Citrus clementina; type=EST; length=598bp
GATGAAAGACAGAGGGATTCCACTGTACGGTGGCAAATACGTACAGTACA
ATATTCTAGGAAACCTCTTTCAGGTCTCCTCTAAGTATGTTCCTCCTCTT
CAGCCTATTGGTCGCGGCGCATACGGCATCGTTTGTAGTGCTGTAAATTC
AGAGACAAAAGAAGAGGTTGCAATAAAGAAAATTACGAATGCATTCGATA
ACAGGATTGATGCCAAGAGGATCCTCCGTGAGATCAAACTCCTCTGTCAC
ATGACTCATGAGAATATTGTCAAGGTGAAGGACATAATACCACCGATGGA
TAAGGAAAAGTTCAATGACGTTTATATTGTATATGAGTTGATGGATACTG
ATCTGCATCAGATAATACGCTCCAAACAGGCTCTGACTGATGATCATTGT
CAGTATTTCCTATACCAATTGCTGCGGGGACTGAAGTACATACACTCTGC
TAATGTTTTGCACCGAGATTTAAAACCAAGCAACCTGCTGCTCAATGCAA
ACTGTGATCTTAAGATTTGTGACTTTGGACTAGCAAGAACCACTTCAGAG
ACAGATTTCATGACGGAGTATGTTGTAACCCGATGGTATCGAGCCCCT
back to top