CX288876

Overview
NameCX288876
Unique NameCX288876
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length598
Libraries
Library NameType
IF1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX288876 vs. ExPASy Swiss-Prot
Match: MK03_HUMAN (Mitogen-activated protein kinase 3 OS=Homo sapiens GN=MAPK3 PE=1 SV=4)

HSP 1 Score: 199.519 bits (506), Expect = 1.053e-50
Identity = 104/186 (55.91%), Postives = 133/186 (71.51%), Query Frame = 2
Query:   53 ILGNLFQVSSKYVPPLQPIGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREIKLLCHMTHENIVKVKDIIPPMDKEKFNDVYIVYELMDTDLHQIIRSKQALTDDHCQYFLYQLLRGLKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLARTT----SETDFMTEYVVTRWYRAP 598
            + G  F V  +Y   LQ IG GAYG+V SA +   K  VAIKKI+  F+++   +R LREI++L    HEN++ ++DI+     E   DVYIV +LM+TDL+++++S+Q L++DH  YFLYQ+LRGLKYIHSANVLHRDLKPSNLL+N  CDLKICDFGLAR        T F+TEYV TRWYRAP
Sbjct:   31 VKGQPFDVGPRYTQ-LQYIGEGAYGMVSSAYDHVRKTRVAIKKIS-PFEHQTYCQRTLREIQILLRFRHENVIGIRDILRASTLEAMRDVYIVQDLMETDLYKLLKSQQ-LSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLINTTCDLKICDFGLARIADPEHDHTGFLTEYVATRWYRAP 213          
BLAST of CX288876 vs. ExPASy Swiss-Prot
Match: MK03_RAT (Mitogen-activated protein kinase 3 OS=Rattus norvegicus GN=Mapk3 PE=1 SV=5)

HSP 1 Score: 199.134 bits (505), Expect = 1.375e-50
Identity = 104/186 (55.91%), Postives = 133/186 (71.51%), Query Frame = 2
Query:   53 ILGNLFQVSSKYVPPLQPIGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREIKLLCHMTHENIVKVKDIIPPMDKEKFNDVYIVYELMDTDLHQIIRSKQALTDDHCQYFLYQLLRGLKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLARTT----SETDFMTEYVVTRWYRAP 598
            + G  F V  +Y   LQ IG GAYG+V SA +   K  VAIKKI+  F+++   +R LREI++L    HEN++ ++DI+     E   DVYIV +LM+TDL+++++S+Q L++DH  YFLYQ+LRGLKYIHSANVLHRDLKPSNLL+N  CDLKICDFGLAR        T F+TEYV TRWYRAP
Sbjct:   32 VKGQPFDVGPRYTQ-LQYIGEGAYGMVSSAYDHVRKTRVAIKKIS-PFEHQTYCQRTLREIQILLRFRHENVIGIRDILRAPTLEAMRDVYIVQDLMETDLYKLLKSQQ-LSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLINTTCDLKICDFGLARIADPEHDHTGFLTEYVATRWYRAP 214          
BLAST of CX288876 vs. ExPASy Swiss-Prot
Match: MK03_MOUSE (Mitogen-activated protein kinase 3 OS=Mus musculus GN=Mapk3 PE=1 SV=5)

HSP 1 Score: 199.134 bits (505), Expect = 1.375e-50
Identity = 104/186 (55.91%), Postives = 133/186 (71.51%), Query Frame = 2
Query:   53 ILGNLFQVSSKYVPPLQPIGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREIKLLCHMTHENIVKVKDIIPPMDKEKFNDVYIVYELMDTDLHQIIRSKQALTDDHCQYFLYQLLRGLKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLARTT----SETDFMTEYVVTRWYRAP 598
            + G  F V  +Y   LQ IG GAYG+V SA +   K  VAIKKI+  F+++   +R LREI++L    HEN++ ++DI+     E   DVYIV +LM+TDL+++++S+Q L++DH  YFLYQ+LRGLKYIHSANVLHRDLKPSNLL+N  CDLKICDFGLAR        T F+TEYV TRWYRAP
Sbjct:   32 VKGQPFDVGPRYTQ-LQYIGEGAYGMVSSAYDHVRKTRVAIKKIS-PFEHQTYCQRTLREIQILLRFRHENVIGIRDILRAPTLEAMRDVYIVQDLMETDLYKLLKSQQ-LSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLINTTCDLKICDFGLARIADPEHDHTGFLTEYVATRWYRAP 214          
BLAST of CX288876 vs. ExPASy Swiss-Prot
Match: FUS3_YEAST (Mitogen-activated protein kinase FUS3 OS=Saccharomyces cerevisiae GN=FUS3 PE=1 SV=2)

HSP 1 Score: 198.749 bits (504), Expect = 1.796e-50
Identity = 108/199 (54.27%), Postives = 133/199 (66.83%), Query Frame = 2
Query:   35 KYVQYNILGNLFQVSSKYVPPLQPIGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREIKLLCHMTHENIVKVKDIIPPMDKEKFNDVYIVYELMDTDLHQIIRSKQALTDDHCQYFLYQLLRGLKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLAR-----------TTSETDFMTEYVVTRWYRAP 598
            K + YNI  + FQ+ S        +G GAYG+VCSA +  T E VAIKKI   FD  + A R LREIK+L H  HENI+ + +I  P   E FN+VYI+ ELM TDLH++I S Q L+DDH QYF+YQ LR +K +H +NV+HRDLKPSNLL+N+NCDLK+CDFGLAR            T +   MTEYV TRWYRAP
Sbjct:    3 KRIVYNISSD-FQLKSL-------LGEGAYGVVCSATHKPTGEIVAIKKI-EPFDKPLFALRTLREIKILKHFKHENIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVI-STQMLSDDHIQYFIYQTLRAVKVLHGSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMTEYVATRWYRAP 191          
BLAST of CX288876 vs. ExPASy Swiss-Prot
Match: ERKA_DROME (Mitogen-activated protein kinase ERK-A OS=Drosophila melanogaster GN=rl PE=1 SV=2)

HSP 1 Score: 197.208 bits (500), Expect = 5.226e-50
Identity = 104/186 (55.91%), Postives = 135/186 (72.58%), Query Frame = 2
Query:   53 ILGNLFQVSSKYVPPLQPIGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREIKLLCHMTHENIVKVKDIIPPMDKEKFNDVYIVYELMDTDLHQIIRSKQALTDDHCQYFLYQLLRGLKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLARTT----SETDFMTEYVVTRWYRAP 598
            I G +F+V  +Y+  L  IG GAYG+V SA ++ T + VAIKKI+  F+++   +R LREI +L    HENI+ ++DI+     ++  DVYIV  LM+TDL++++++ Q L++DH  YFLYQ+LRGLKYIHSANVLHRDLKPSNLLLN  CDLKICDFGLAR        T F+TEYV TRWYRAP
Sbjct:   77 IRGQIFEVGPRYIK-LAYIGEGAYGMVVSADDTLTNQRVAIKKIS-PFEHQTYCQRTLREITILTRFKHENIIDIRDILRVDSIDQMRDVYIVQCLMETDLYKLLKT-QRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNKTCDLKICDFGLARIADPEHDHTGFLTEYVATRWYRAP 259          
BLAST of CX288876 vs. ExPASy Swiss-Prot
Match: SPM1_SCHPO (Mitogen-activated protein kinase spm1 OS=Schizosaccharomyces pombe GN=spm1 PE=1 SV=1)

HSP 1 Score: 196.438 bits (498), Expect = 8.915e-50
Identity = 112/185 (60.54%), Postives = 131/185 (70.81%), Query Frame = 2
Query:   86 YVPP----LQPIGRGAYGIVCSAVN--SETKEEVAIKKITNAFDNRIDAKRILREIKLLCHM-THENIVKVKD--IIPPMDKEKFNDVYIVYELMDTDLHQIIRSKQALTDDHCQYFLYQLLRGLKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLARTTSET-----DFMTEYVVTRWYRAP 598
            YV P    ++ +G+GAYGIVC+A N  S+ +E VAIKKITN F   I  KR LREIKLL H   H NI  + D  II P +   FN+VYI  ELM+ DL+ II+S Q LTD H Q F+YQ+L GLKYIHSANV+HRDLKP NLL+NA+C+LKICDFGLAR  SE       FMTEYV TRWYRAP
Sbjct:   16 YVEPNFKVVKELGQGAYGIVCAARNVASKDQEAVAIKKITNVFSKSILTKRALREIKLLIHFRNHRNITCIYDLDIINPYN---FNEVYIYEELMEADLNAIIKSGQPLTDAHFQSFIYQILCGLKYIHSANVIHRDLKPGNLLVNADCELKICDFGLARGCSENPEENPGFMTEYVATRWYRAP 197          
BLAST of CX288876 vs. ExPASy Swiss-Prot
Match: MPK13_ORYSJ (Mitogen-activated protein kinase 13 OS=Oryza sativa subsp. japonica GN=MPK13 PE=2 SV=1)

HSP 1 Score: 194.126 bits (492), Expect = 4.424e-49
Identity = 93/168 (55.36%), Postives = 126/168 (75.00%), Query Frame = 2
Query:  107 IGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREIKLLCHMTHENIVKVKDIIPPMDKEKFNDVYIVYELMDTDLHQIIRSKQALTDDHCQYFLYQLLRGLKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLART----TSETDFMTEYVVTRWYRAP 598
            +G+G+YG+V +AV++ T E VAIKKI + F++  DA RILREIK+L  + H +IV +K I+ P  + +F D+Y+V+ELM++DLHQ+I +   L+ +H ++FLYQLL  LKYIHSANV HRDLKP N+L N++C LKICDFGLAR     +  T F T+YV TRWYRAP
Sbjct:   19 VGKGSYGVVAAAVDTHTGERVAIKKINDVFEHVSDAIRILREIKVLRLLRHPDIVVIKHIMLPPTRREFRDIYVVFELMESDLHQVIEANHDLSPEHHRFFLYQLLCALKYIHSANVFHRDLKPKNILANSDCKLKICDFGLARVAFNDSPSTIFWTDYVATRWYRAP 186          
BLAST of CX288876 vs. ExPASy Swiss-Prot
Match: MPK13_ORYSI (Mitogen-activated protein kinase 13 OS=Oryza sativa subsp. indica GN=MPK13 PE=2 SV=2)

HSP 1 Score: 194.126 bits (492), Expect = 4.424e-49
Identity = 93/168 (55.36%), Postives = 126/168 (75.00%), Query Frame = 2
Query:  107 IGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREIKLLCHMTHENIVKVKDIIPPMDKEKFNDVYIVYELMDTDLHQIIRSKQALTDDHCQYFLYQLLRGLKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLART----TSETDFMTEYVVTRWYRAP 598
            +G+G+YG+V +AV++ T E VAIKKI + F++  DA RILREIK+L  + H +IV +K I+ P  + +F D+Y+V+ELM++DLHQ+I +   L+ +H ++FLYQLL  LKYIHSANV HRDLKP N+L N++C LKICDFGLAR     +  T F T+YV TRWYRAP
Sbjct:   19 VGKGSYGVVAAAVDTHTGERVAIKKINDVFEHVSDAIRILREIKVLRLLRHPDIVVIKHIMLPPTRREFRDIYVVFELMESDLHQVIEANHDLSPEHHRFFLYQLLCALKYIHSANVFHRDLKPKNILANSDCKLKICDFGLARVAFNDSPSTIFWTDYVATRWYRAP 186          
BLAST of CX288876 vs. ExPASy Swiss-Prot
Match: MK14_MOUSE (Mitogen-activated protein kinase 14 OS=Mus musculus GN=Mapk14 PE=1 SV=3)

HSP 1 Score: 194.126 bits (492), Expect = 4.424e-49
Identity = 97/179 (54.19%), Postives = 130/179 (72.63%), Query Frame = 2
Query:   65 LFQVSSKYVPPLQPIGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREIKLLCHMTHENIVKVKDIIPPMDK-EKFNDVYIVYELMDTDLHQIIRSKQALTDDHCQYFLYQLLRGLKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLARTTSETDFMTEYVVTRWYRAP 598
            +++V  +Y   L P+G GAYG VC+A +++T   VA+KK++  F + I AKR  RE++LL HM HEN++ + D+  P    E+FNDVY+V  LM  DL+ I++  Q LTDDH Q+ +YQ+LRGLKYIHSA+++HRDLKPSNL +N +C+LKI DFGLAR T   D MT YV TRWYRAP
Sbjct:   17 IWEVPERY-QNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC-QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTD--DEMTGYVATRWYRAP 191          
BLAST of CX288876 vs. ExPASy Swiss-Prot
Match: MK14A_CYPCA (Mitogen-activated protein kinase 14A OS=Cyprinus carpio GN=mapk14a PE=1 SV=1)

HSP 1 Score: 194.126 bits (492), Expect = 4.424e-49
Identity = 96/168 (57.14%), Postives = 124/168 (73.81%), Query Frame = 2
Query:   98 LQPIGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREIKLLCHMTHENIVKVKDIIPPMDK-EKFNDVYIVYELMDTDLHQIIRSKQALTDDHCQYFLYQLLRGLKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLARTTSETDFMTEYVVTRWYRAP 598
            L P+G GAYG VCSA + +T  +VA+KK++  F + I AKR  RE++LL HM HEN++ + D+  P    E+FNDVY+V  LM  DL+ I++  Q LTDDH Q+ +YQ+LRGLKYIHSA+++HRDLKPSNL +N +C+LKI DFGLAR T   D MT YV TRWYRAP
Sbjct:   28 LSPVGSGAYGTVCSAYDEKTGLKVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPATSLEEFNDVYLVTHLMGADLNNIVKC-QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTD--DEMTGYVATRWYRAP 192          
The following BLAST results are available for this feature:
BLAST of CX288876 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
MK03_HUMAN1.053e-5055.91Mitogen-activated protein kinase 3 OS=Homo sapiens... [more]
MK03_RAT1.375e-5055.91Mitogen-activated protein kinase 3 OS=Rattus norve... [more]
MK03_MOUSE1.375e-5055.91Mitogen-activated protein kinase 3 OS=Mus musculus... [more]
FUS3_YEAST1.796e-5054.27Mitogen-activated protein kinase FUS3 OS=Saccharom... [more]
ERKA_DROME5.226e-5055.91Mitogen-activated protein kinase ERK-A OS=Drosophi... [more]
SPM1_SCHPO8.915e-5060.54Mitogen-activated protein kinase spm1 OS=Schizosac... [more]
MPK13_ORYSJ4.424e-4955.36Mitogen-activated protein kinase 13 OS=Oryza sativ... [more]
MPK13_ORYSI4.424e-4955.36Mitogen-activated protein kinase 13 OS=Oryza sativ... [more]
MK14_MOUSE4.424e-4954.19Mitogen-activated protein kinase 14 OS=Mus musculu... [more]
MK14A_CYPCA4.424e-4957.14Mitogen-activated protein kinase 14A OS=Cyprinus c... [more]

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Properties
Property NameValue
Genbank descriptionC02006D09SK IF1 Citrus clementina cDNA clone C02006D09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX288876 ID=CX288876; Name=CX288876; organism=Citrus clementina; type=EST; length=598bp
GATGAAAGACAGAGGGATTCCACTGTACGGTGGCAAATACGTACAGTACA
ATATTCTAGGAAACCTCTTTCAGGTCTCCTCTAAGTATGTTCCTCCTCTT
CAGCCTATTGGTCGCGGCGCATACGGCATCGTTTGTAGTGCTGTAAATTC
AGAGACAAAAGAAGAGGTTGCAATAAAGAAAATTACGAATGCATTCGATA
ACAGGATTGATGCCAAGAGGATCCTCCGTGAGATCAAACTCCTCTGTCAC
ATGACTCATGAGAATATTGTCAAGGTGAAGGACATAATACCACCGATGGA
TAAGGAAAAGTTCAATGACGTTTATATTGTATATGAGTTGATGGATACTG
ATCTGCATCAGATAATACGCTCCAAACAGGCTCTGACTGATGATCATTGT
CAGTATTTCCTATACCAATTGCTGCGGGGACTGAAGTACATACACTCTGC
TAATGTTTTGCACCGAGATTTAAAACCAAGCAACCTGCTGCTCAATGCAA
ACTGTGATCTTAAGATTTGTGACTTTGGACTAGCAAGAACCACTTCAGAG
ACAGATTTCATGACGGAGTATGTTGTAACCCGATGGTATCGAGCCCCT
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